RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF561-AS1K7EIQ3 104 aa15.47■□□□□ 0.07
VPS16-201ENST00000380443 C2orf48Q96LS8 159 aa15.47■□□□□ 0.07
VPS16-201ENST00000380443 DNAL4O96015 105 aa15.47■□□□□ 0.07
VPS16-201ENST00000380443 FAM240AA0A1B0GVK7 77 aa15.44■□□□□ 0.06
VPS16-201ENST00000380443 C6orf48Q9UBA6 75 aa15.43■□□□□ 0.06
VPS16-201ENST00000380443 CAMK2N2Q96S95 79 aa15.42■□□□□ 0.06
VPS16-201ENST00000380443 LINC00526Q96FQ7 95 aa15.41■□□□□ 0.06
VPS16-201ENST00000380443 A0A087WYN8 130 aa15.4■□□□□ 0.06
VPS16-201ENST00000380443 S100A7L2Q5SY68 101 aa15.4■□□□□ 0.06
VPS16-201ENST00000380443 SNCGO76070 127 aa15.39■□□□□ 0.05
VPS16-201ENST00000380443 PRR3P79522 188 aaKnown RBP15.39■□□□□ 0.05
VPS16-201ENST00000380443 C15orf56Q8N910 161 aa15.39■□□□□ 0.05
VPS16-201ENST00000380443 B9D2Q9BPU9 175 aa15.38■□□□□ 0.05
VPS16-201ENST00000380443 ACYP1P07311 99 aa15.38■□□□□ 0.05
VPS16-201ENST00000380443 INAFM2P0DMQ5 153 aa15.38■□□□□ 0.05
VPS16-201ENST00000380443 PRKDCP78527 4128 aaKnown RBP15.37■□□□□ 0.05
VPS16-201ENST00000380443 IGKV2D-24A0A075B6R9 120 aa15.37■□□□□ 0.05
VPS16-201ENST00000380443 LECT2O14960 151 aa15.36■□□□□ 0.05
VPS16-201ENST00000380443 LINC00167Q96N53 147 aa15.36■□□□□ 0.05
VPS16-201ENST00000380443 Q9HAA7 133 aa15.36■□□□□ 0.05
VPS16-201ENST00000380443 HIGD2BQ4VC39 106 aa15.36■□□□□ 0.05
VPS16-201ENST00000380443 LINC00588Q9Y4M8 146 aa15.36■□□□□ 0.05
VPS16-201ENST00000380443 NCR3O14931 201 aa15.35■□□□□ 0.05
VPS16-201ENST00000380443 IGLV6-57P01721 117 aa15.34■□□□□ 0.05
VPS16-201ENST00000380443 UPK3BQ9BT76 320 aa15.34■□□□□ 0.05
VPS16-201ENST00000380443 C22orf24Q9Y442 160 aa15.34■□□□□ 0.05
VPS16-201ENST00000380443 XGP55808 180 aa15.33■□□□□ 0.05
VPS16-201ENST00000380443 Q8NDZ9 215 aa15.33■□□□□ 0.05
VPS16-201ENST00000380443 RMI2Q96E14 147 aa15.33■□□□□ 0.05
VPS16-201ENST00000380443 TENM3Q9P273 2699 aa15.33■□□□□ 0.04
VPS16-201ENST00000380443 NDUFC2-KCTD14E9PQ53 114 aa15.32■□□□□ 0.04
VPS16-201ENST00000380443 ORMDL1Q9P0S3 153 aa15.32■□□□□ 0.04
VPS16-201ENST00000380443 Q6ZRU5 148 aa15.31■□□□□ 0.04
VPS16-201ENST00000380443 NHLRC4P0CG21 123 aaPredicted RBP15.31■□□□□ 0.04
VPS16-201ENST00000380443 Q8N814 137 aa15.31■□□□□ 0.04
VPS16-201ENST00000380443 MT-ATP8P03928 68 aa15.29■□□□□ 0.04
VPS16-201ENST00000380443 C6orf99Q4VX62 202 aa15.29■□□□□ 0.04
VPS16-201ENST00000380443 SYCNQ0VAF6 134 aa15.28■□□□□ 0.04
VPS16-201ENST00000380443 OBSCN-AS1Q96MR7 158 aa15.28■□□□□ 0.04
VPS16-201ENST00000380443 RPL18AQ02543 176 aaKnown RBP15.27■□□□□ 0.04
VPS16-201ENST00000380443 XAGE1AQ9HD64 81 aa15.25■□□□□ 0.03
VPS16-201ENST00000380443 TMEM256-PLSCR3K7ERE1 68 aa15.24■□□□□ 0.03
VPS16-201ENST00000380443 LINC00575Q6W349 94 aa15.24■□□□□ 0.03
VPS16-201ENST00000380443 H3BQ85 93 aa15.24■□□□□ 0.03
VPS16-201ENST00000380443 M0R378 163 aa15.24■□□□□ 0.03
VPS16-201ENST00000380443 VPREB1P12018 145 aa15.24■□□□□ 0.03
VPS16-201ENST00000380443 TRBV7-6A0A0J9YX20 115 aa15.23■□□□□ 0.03
VPS16-201ENST00000380443 A0A1B0GV72 72 aa15.23■□□□□ 0.03
VPS16-201ENST00000380443 SVIPQ8NHG7 77 aa15.23■□□□□ 0.03
VPS16-201ENST00000380443 TGP01266 2768 aa15.22■□□□□ 0.03
VPS16-201ENST00000380443 HUWE1Q7Z6Z7 4374 aaKnown RBP15.22■□□□□ 0.03
VPS16-201ENST00000380443 TRAV23DV6A0A075B6W5 121 aa15.22■□□□□ 0.03
VPS16-201ENST00000380443 TLX1NBP0CAT3 122 aa15.22■□□□□ 0.03
VPS16-201ENST00000380443 TRBV10-3A0A0K0K1G6 114 aa15.21■□□□□ 0.03
VPS16-201ENST00000380443 JMJD7-PLA2G4BH0Y9G9 81 aa15.2■□□□□ 0.02
VPS16-201ENST00000380443 Q6Q795 121 aa15.2■□□□□ 0.02
VPS16-201ENST00000380443 DIRC1Q969H9 104 aa15.2■□□□□ 0.02
VPS16-201ENST00000380443 hADV29S1A0JD25 119 aa15.19■□□□□ 0.02
VPS16-201ENST00000380443 SLPIP03973 132 aa15.19■□□□□ 0.02
VPS16-201ENST00000380443 COL7A1Q02388 2944 aa15.18■□□□□ 0.02
VPS16-201ENST00000380443 Q6ZRP5 223 aa15.17■□□□□ 0.02
VPS16-201ENST00000380443 DNAH9Q9NYC9 4486 aa15.16■□□□□ 0.02
VPS16-201ENST00000380443 USP17L23D6RBM5 183 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 ZNF73O43830 326 aaPredicted RBP15.15■□□□□ 0.02
VPS16-201ENST00000380443 GHRHP01286 108 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 GAGE2EQ4V326 116 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 SDIM1Q6ZPB5 146 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 GAGE2DQ9UEU5 116 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 PLA2G2DQ9UNK4 145 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 GAGE2BQ13066 116 aa15.15■□□□□ 0.02
VPS16-201ENST00000380443 COX7BP24311 80 aa15.13■□□□□ 0.01
VPS16-201ENST00000380443 GAGE2AQ6NT46 116 aa15.12■□□□□ 0.01
VPS16-201ENST00000380443 LINC00643Q86TS7 51 aa15.12■□□□□ 0.01
VPS16-201ENST00000380443 C14orf132Q9NPU4 83 aa15.1■□□□□ 0.01
VPS16-201ENST00000380443 ELOF1P60002 83 aaKnown RBP15.1■□□□□ 0.01
VPS16-201ENST00000380443 C9orf129Q5T035 196 aaKnown RBP15.1■□□□□ 0.01
VPS16-201ENST00000380443 APLNQ9ULZ1 77 aa15.09■□□□□ 0.01
VPS16-201ENST00000380443 TTC32Q5I0X7 151 aa15.08■□□□□ 0.01
VPS16-201ENST00000380443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.08■□□□□ 0.01
VPS16-201ENST00000380443 IMUPQ9GZP8 106 aa15.08■□□□□ 0.01
VPS16-201ENST00000380443 TRBV7-7A0A0K0K1E9 115 aa15.07■□□□□ 0
VPS16-201ENST00000380443 NKAPP1Q8N9T2 125 aa15.07■□□□□ 0
VPS16-201ENST00000380443 IGLV5-37A0A075B6J1 123 aa15.06■□□□□ 0
VPS16-201ENST00000380443 CCKP06307 115 aa15.05■□□□□ -0
VPS16-201ENST00000380443 CASC10Q5T4H9 136 aa15.05■□□□□ -0
VPS16-201ENST00000380443 WWC2-AS2Q96NR7 200 aa15.05■□□□□ -0
VPS16-201ENST00000380443 UBE2DNLQ8IWF7 75 aa15.04■□□□□ -0
VPS16-201ENST00000380443 KCNQ1DNQ9H478 68 aa15.03■□□□□ -0
VPS16-201ENST00000380443 LOC107984640A0A0U1RRK4 108 aa15.01□□□□□ -0.01
VPS16-201ENST00000380443 Q6ZQY7 126 aa15.01□□□□□ -0.01
VPS16-201ENST00000380443 SMCR5Q8TEV8 140 aa15.01□□□□□ -0.01
VPS16-201ENST00000380443 NUPR2A6NF83 97 aa15□□□□□ -0.01
VPS16-201ENST00000380443 LINC00528Q8N1L1 170 aa15□□□□□ -0.01
VPS16-201ENST00000380443 PDE6GP18545 87 aa14.99□□□□□ -0.01
VPS16-201ENST00000380443 RBM3P98179 157 aaKnown RBP14.99□□□□□ -0.01
VPS16-201ENST00000380443 DNAH1Q9P2D7 4330 aa14.99□□□□□ -0.01
VPS16-201ENST00000380443 SERTAD4-AS1Q5TG53 156 aa14.98□□□□□ -0.01
VPS16-201ENST00000380443 C7orf33Q8WU49 177 aa14.98□□□□□ -0.01
VPS16-201ENST00000380443 LOC110117498A0A087WWA1 95 aa14.97□□□□□ -0.01
VPS16-201ENST00000380443 LAMTOR3Q9UHA4 124 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms