RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 NDUFC2O95298 119 aa12.88□□□□□ -0.35
PCDHA4-201ENST00000378125 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
PCDHA4-201ENST00000378125 S100A7L2Q5SY68 101 aa12.87□□□□□ -0.35
PCDHA4-201ENST00000378125 TMEM126AQ9H061 195 aa12.87□□□□□ -0.35
PCDHA4-201ENST00000378125 ZNF561-AS1K7EIQ3 104 aa12.85□□□□□ -0.35
PCDHA4-201ENST00000378125 RPL18AQ02543 176 aaKnown RBP12.85□□□□□ -0.35
PCDHA4-201ENST00000378125 KRTAP26-1Q6PEX3 210 aa12.84□□□□□ -0.35
PCDHA4-201ENST00000378125 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
PCDHA4-201ENST00000378125 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
PCDHA4-201ENST00000378125 IGKV2D-24A0A075B6R9 120 aa12.83□□□□□ -0.36
PCDHA4-201ENST00000378125 GAGE2AQ6NT46 116 aa12.82□□□□□ -0.36
PCDHA4-201ENST00000378125 C14orf132Q9NPU4 83 aa12.82□□□□□ -0.36
PCDHA4-201ENST00000378125 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
PCDHA4-201ENST00000378125 C15orf56Q8N910 161 aa12.81□□□□□ -0.36
PCDHA4-201ENST00000378125 C1orf43Q9BWL3 253 aa12.81□□□□□ -0.36
PCDHA4-201ENST00000378125 K7EIL1 84 aa12.8□□□□□ -0.36
PCDHA4-201ENST00000378125 GAGE2BQ13066 116 aa12.8□□□□□ -0.36
PCDHA4-201ENST00000378125 GAGE2EQ4V326 116 aa12.8□□□□□ -0.36
PCDHA4-201ENST00000378125 Q6ZRU5 148 aa12.8□□□□□ -0.36
PCDHA4-201ENST00000378125 GAGE2DQ9UEU5 116 aa12.8□□□□□ -0.36
PCDHA4-201ENST00000378125 Q8N814 137 aa12.79□□□□□ -0.36
PCDHA4-201ENST00000378125 ORMDL1Q9P0S3 153 aa12.79□□□□□ -0.36
PCDHA4-201ENST00000378125 GVQW2A0A096LPI5 108 aaPredicted RBP12.78□□□□□ -0.36
PCDHA4-201ENST00000378125 LINC01556Q5JQF7 62 aa12.78□□□□□ -0.36
PCDHA4-201ENST00000378125 SMCR5Q8TEV8 140 aa12.78□□□□□ -0.36
PCDHA4-201ENST00000378125 INAFM2P0DMQ5 153 aa12.77□□□□□ -0.36
PCDHA4-201ENST00000378125 MGAM2Q2M2H8 2515 aa12.77□□□□□ -0.37
PCDHA4-201ENST00000378125 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
PCDHA4-201ENST00000378125 TRBV10-3A0A0K0K1G6 114 aa12.75□□□□□ -0.37
PCDHA4-201ENST00000378125 TRAV10A0A0B4J240 114 aa12.74□□□□□ -0.37
PCDHA4-201ENST00000378125 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
PCDHA4-201ENST00000378125 LINC00588Q9Y4M8 146 aa12.74□□□□□ -0.37
PCDHA4-201ENST00000378125 IGLV6-57P01721 117 aa12.73□□□□□ -0.37
PCDHA4-201ENST00000378125 ACYP1P07311 99 aa12.73□□□□□ -0.37
PCDHA4-201ENST00000378125 MUC7Q8TAX7 377 aa12.73□□□□□ -0.37
PCDHA4-201ENST00000378125 LINC00575Q6W349 94 aa12.71□□□□□ -0.38
PCDHA4-201ENST00000378125 LINC00167Q96N53 147 aa12.71□□□□□ -0.38
PCDHA4-201ENST00000378125 DNAH10OSP0CZ25 163 aa12.7□□□□□ -0.38
PCDHA4-201ENST00000378125 OBSCN-AS1Q96MR7 158 aa12.7□□□□□ -0.38
PCDHA4-201ENST00000378125 ANAPC13Q9BS18 74 aa12.7□□□□□ -0.38
PCDHA4-201ENST00000378125 Q6ZRP5 223 aa12.69□□□□□ -0.38
PCDHA4-201ENST00000378125 TRAV23DV6A0A075B6W5 121 aa12.68□□□□□ -0.38
PCDHA4-201ENST00000378125 CASC10Q5T4H9 136 aa12.68□□□□□ -0.38
PCDHA4-201ENST00000378125 A0A1B0GX51 115 aa12.68□□□□□ -0.38
PCDHA4-201ENST00000378125 hADV29S1A0JD25 119 aa12.68□□□□□ -0.38
PCDHA4-201ENST00000378125 NDUFC2-KCTD14E9PQ53 114 aa12.67□□□□□ -0.38
PCDHA4-201ENST00000378125 VPREB1P12018 145 aa12.67□□□□□ -0.38
PCDHA4-201ENST00000378125 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
PCDHA4-201ENST00000378125 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
PCDHA4-201ENST00000378125 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
PCDHA4-201ENST00000378125 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
PCDHA4-201ENST00000378125 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
PCDHA4-201ENST00000378125 LYSTQ99698 3801 aa12.65□□□□□ -0.38
PCDHA4-201ENST00000378125 Q6Q795 121 aa12.65□□□□□ -0.39
PCDHA4-201ENST00000378125 ZNF73O43830 326 aaPredicted RBP12.63□□□□□ -0.39
PCDHA4-201ENST00000378125 LINC00643Q86TS7 51 aa12.63□□□□□ -0.39
PCDHA4-201ENST00000378125 DIRC1Q969H9 104 aa12.63□□□□□ -0.39
PCDHA4-201ENST00000378125 LINC00846Q9NV44 126 aa12.63□□□□□ -0.39
PCDHA4-201ENST00000378125 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-201ENST00000378125 Q6ZQY7 126 aa12.62□□□□□ -0.39
PCDHA4-201ENST00000378125 SDIM1Q6ZPB5 146 aa12.61□□□□□ -0.39
PCDHA4-201ENST00000378125 TRBV7-7A0A0K0K1E9 115 aa12.61□□□□□ -0.39
PCDHA4-201ENST00000378125 USP17L23D6RBM5 183 aa12.6□□□□□ -0.39
PCDHA4-201ENST00000378125 M0R378 163 aa12.6□□□□□ -0.39
PCDHA4-201ENST00000378125 MDFIQ99750 246 aa12.59□□□□□ -0.39
PCDHA4-201ENST00000378125 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
PCDHA4-201ENST00000378125 STAB2Q8WWQ8 2551 aa12.59□□□□□ -0.39
PCDHA4-201ENST00000378125 DNAH1Q9P2D7 4330 aa12.59□□□□□ -0.39
PCDHA4-201ENST00000378125 JMJD7-PLA2G4BH0Y9G9 81 aa12.59□□□□□ -0.39
PCDHA4-201ENST00000378125 COX7BP24311 80 aa12.58□□□□□ -0.4
PCDHA4-201ENST00000378125 CCKP06307 115 aa12.57□□□□□ -0.4
PCDHA4-201ENST00000378125 SERTAD4-AS1Q5TG53 156 aa12.57□□□□□ -0.4
PCDHA4-201ENST00000378125 IGKV3D-7A0A0C4DH55 119 aa12.56□□□□□ -0.4
PCDHA4-201ENST00000378125 FAM236AA0A1B0GUQ0 79 aa12.55□□□□□ -0.4
PCDHA4-201ENST00000378125 FAM236BA0A1B0GV22 79 aa12.55□□□□□ -0.4
PCDHA4-201ENST00000378125 ELOF1P60002 83 aaKnown RBP12.55□□□□□ -0.4
PCDHA4-201ENST00000378125 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
PCDHA4-201ENST00000378125 NKAPP1Q8N9T2 125 aa12.53□□□□□ -0.4
PCDHA4-201ENST00000378125 RBM3P98179 157 aaKnown RBP12.52□□□□□ -0.41
PCDHA4-201ENST00000378125 DNAH10Q8IVF4 4471 aa12.51□□□□□ -0.41
PCDHA4-201ENST00000378125 F8WDY8 70 aa12.51□□□□□ -0.41
PCDHA4-201ENST00000378125 IMUPQ9GZP8 106 aa12.5□□□□□ -0.41
PCDHA4-201ENST00000378125 DNAH9Q9NYC9 4486 aa12.5□□□□□ -0.41
PCDHA4-201ENST00000378125 RPL37AP8A6NKH3 93 aa12.5□□□□□ -0.41
PCDHA4-201ENST00000378125 CCDC179H3BU77 68 aa12.5□□□□□ -0.41
PCDHA4-201ENST00000378125 M0R2N4 97 aa12.5□□□□□ -0.41
PCDHA4-201ENST00000378125 C7orf33Q8WU49 177 aa12.5□□□□□ -0.41
PCDHA4-201ENST00000378125 KRTAP1-5Q9BYS1 174 aa12.49□□□□□ -0.41
PCDHA4-201ENST00000378125 RMI2Q96E14 147 aa12.48□□□□□ -0.41
PCDHA4-201ENST00000378125 UPK3BQ9BT76 320 aa12.48□□□□□ -0.41
PCDHA4-201ENST00000378125 LINC00528Q8N1L1 170 aa12.47□□□□□ -0.41
PCDHA4-201ENST00000378125 TENM2Q9NT68 2774 aa12.47□□□□□ -0.41
PCDHA4-201ENST00000378125 Q6ZQT0 140 aa12.46□□□□□ -0.41
PCDHA4-201ENST00000378125 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.46□□□□□ -0.41
PCDHA4-201ENST00000378125 A0A087WVE0 104 aa12.45□□□□□ -0.42
PCDHA4-201ENST00000378125 TRBV7-6A0A0J9YX20 115 aa12.45□□□□□ -0.42
PCDHA4-201ENST00000378125 TLX1NBP0CAT3 122 aa12.44□□□□□ -0.42
PCDHA4-201ENST00000378125 Q6JHZ5 121 aa12.44□□□□□ -0.42
PCDHA4-201ENST00000378125 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
PCDHA4-201ENST00000378125 DSCR8Q96T75 97 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms