RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 HTN3P15516 51 aa9.47□□□□□ -0.89
HMGCL-203ENST00000374490 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
HMGCL-203ENST00000374490 A0A0J9YWU9 116 aa9.46□□□□□ -0.89
HMGCL-203ENST00000374490 H3BNG1 76 aa9.46□□□□□ -0.89
HMGCL-203ENST00000374490 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.89
HMGCL-203ENST00000374490 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
HMGCL-203ENST00000374490 JMJD7-PLA2G4BH0Y9G9 81 aa9.45□□□□□ -0.9
HMGCL-203ENST00000374490 Q8N3U1 123 aa9.45□□□□□ -0.9
HMGCL-203ENST00000374490 Q8N814 137 aa9.45□□□□□ -0.9
HMGCL-203ENST00000374490 TMEM256-PLSCR3K7ERE1 68 aa9.44□□□□□ -0.9
HMGCL-203ENST00000374490 C14orf132Q9NPU4 83 aa9.44□□□□□ -0.9
HMGCL-203ENST00000374490 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
HMGCL-203ENST00000374490 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
HMGCL-203ENST00000374490 KLK12Q9UKR0 248 aa9.43□□□□□ -0.9
HMGCL-203ENST00000374490 H3BQ85 93 aa9.42□□□□□ -0.9
HMGCL-203ENST00000374490 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
HMGCL-203ENST00000374490 Q6JHZ5 121 aa9.42□□□□□ -0.9
HMGCL-203ENST00000374490 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
HMGCL-203ENST00000374490 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
HMGCL-203ENST00000374490 NCR3O14931 201 aa9.41□□□□□ -0.9
HMGCL-203ENST00000374490 SLPIP03973 132 aa9.41□□□□□ -0.9
HMGCL-203ENST00000374490 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.9
HMGCL-203ENST00000374490 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.9
HMGCL-203ENST00000374490 K7EIL1 84 aa9.4□□□□□ -0.9
HMGCL-203ENST00000374490 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
HMGCL-203ENST00000374490 KMT2CQ8NEZ4 4911 aaKnown RBP9.4□□□□□ -0.91
HMGCL-203ENST00000374490 CCKP06307 115 aa9.39□□□□□ -0.91
HMGCL-203ENST00000374490 C6orf99Q4VX62 202 aa9.39□□□□□ -0.91
HMGCL-203ENST00000374490 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
HMGCL-203ENST00000374490 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
HMGCL-203ENST00000374490 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
HMGCL-203ENST00000374490 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
HMGCL-203ENST00000374490 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
HMGCL-203ENST00000374490 B5MCH6 92 aa9.38□□□□□ -0.91
HMGCL-203ENST00000374490 IGLV6-57P01721 117 aa9.38□□□□□ -0.91
HMGCL-203ENST00000374490 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
HMGCL-203ENST00000374490 RETNQ9HD89 108 aa9.37□□□□□ -0.91
HMGCL-203ENST00000374490 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
HMGCL-203ENST00000374490 F8WDY8 70 aa9.35□□□□□ -0.91
HMGCL-203ENST00000374490 ATP5EP2Q5VTU8 51 aa9.35□□□□□ -0.91
HMGCL-203ENST00000374490 Q8NDZ9 215 aa9.35□□□□□ -0.91
HMGCL-203ENST00000374490 LINC00846Q9NV44 126 aa9.35□□□□□ -0.91
HMGCL-203ENST00000374490 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
HMGCL-203ENST00000374490 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
HMGCL-203ENST00000374490 RYR3Q15413 4870 aa9.34□□□□□ -0.91
HMGCL-203ENST00000374490 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
HMGCL-203ENST00000374490 GHRHP01286 108 aa9.34□□□□□ -0.91
HMGCL-203ENST00000374490 ATOX1O00244 68 aa9.33□□□□□ -0.92
HMGCL-203ENST00000374490 HIST1H4AP62805 103 aaKnown RBP9.33□□□□□ -0.92
HMGCL-203ENST00000374490 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
HMGCL-203ENST00000374490 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
HMGCL-203ENST00000374490 TRBV7-6A0A0J9YX20 115 aa9.32□□□□□ -0.92
HMGCL-203ENST00000374490 DIRC1Q969H9 104 aa9.32□□□□□ -0.92
HMGCL-203ENST00000374490 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
HMGCL-203ENST00000374490 DNAH3Q8TD57 4116 aa9.32□□□□□ -0.92
HMGCL-203ENST00000374490 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 SS18L2Q9UHA2 77 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 NBEAL2Q6ZNJ1 2754 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 LOC110117498A0A087WWA1 95 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 UQCRQO14949 82 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 C3orf22Q8N5N4 141 aa9.31□□□□□ -0.92
HMGCL-203ENST00000374490 PDE6GP18545 87 aa9.3□□□□□ -0.92
HMGCL-203ENST00000374490 Q6ZTC4 211 aa9.3□□□□□ -0.92
HMGCL-203ENST00000374490 TRBV10-3A0A0K0K1G6 114 aa9.29□□□□□ -0.92
HMGCL-203ENST00000374490 RBM3P98179 157 aaKnown RBP9.29□□□□□ -0.92
HMGCL-203ENST00000374490 LINC01556Q5JQF7 62 aa9.29□□□□□ -0.92
HMGCL-203ENST00000374490 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
HMGCL-203ENST00000374490 COX7BP24311 80 aa9.28□□□□□ -0.92
HMGCL-203ENST00000374490 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.28□□□□□ -0.92
HMGCL-203ENST00000374490 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
HMGCL-203ENST00000374490 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
HMGCL-203ENST00000374490 M0R378 163 aa9.27□□□□□ -0.92
HMGCL-203ENST00000374490 UBL5Q9BZL1 73 aa9.27□□□□□ -0.92
HMGCL-203ENST00000374490 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
HMGCL-203ENST00000374490 VPREB1P12018 145 aa9.27□□□□□ -0.93
HMGCL-203ENST00000374490 COX7CP15954 63 aa9.27□□□□□ -0.93
HMGCL-203ENST00000374490 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.93
HMGCL-203ENST00000374490 XAGE1AQ9HD64 81 aa9.27□□□□□ -0.93
HMGCL-203ENST00000374490 LAMTOR3Q9UHA4 124 aa9.27□□□□□ -0.93
HMGCL-203ENST00000374490 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
HMGCL-203ENST00000374490 ESRGQ1W209 222 aa9.26□□□□□ -0.93
HMGCL-203ENST00000374490 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
HMGCL-203ENST00000374490 C15orf56Q8N910 161 aa9.26□□□□□ -0.93
HMGCL-203ENST00000374490 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
HMGCL-203ENST00000374490 ELOF1P60002 83 aaKnown RBP9.25□□□□□ -0.93
HMGCL-203ENST00000374490 Q6ZQT0 140 aa9.25□□□□□ -0.93
HMGCL-203ENST00000374490 Q6ZRU5 148 aa9.25□□□□□ -0.93
HMGCL-203ENST00000374490 Q6ZQY7 126 aa9.24□□□□□ -0.93
HMGCL-203ENST00000374490 C11orf45Q8TAV5 145 aa9.24□□□□□ -0.93
HMGCL-203ENST00000374490 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
HMGCL-203ENST00000374490 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
HMGCL-203ENST00000374490 DSCR8Q96T75 97 aa9.23□□□□□ -0.93
HMGCL-203ENST00000374490 TENM3Q9P273 2699 aa9.21□□□□□ -0.93
HMGCL-203ENST00000374490 IGKV2D-24A0A075B6R9 120 aa9.2□□□□□ -0.94
HMGCL-203ENST00000374490 DNAH10OSP0CZ25 163 aa9.2□□□□□ -0.94
HMGCL-203ENST00000374490 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
HMGCL-203ENST00000374490 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms