RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 H7C2G1 150 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 MT-ATP8P03928 68 aa8.3□□□□□ -1.08
PRPF4-202ENST00000374199 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
PRPF4-202ENST00000374199 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
PRPF4-202ENST00000374199 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
PRPF4-202ENST00000374199 CLEC2BQ92478 149 aa8.3□□□□□ -1.08
PRPF4-202ENST00000374199 FAM218AQ96MZ4 157 aa8.3□□□□□ -1.08
PRPF4-202ENST00000374199 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
PRPF4-202ENST00000374199 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
PRPF4-202ENST00000374199 C9JAW5 83 aa8.28□□□□□ -1.08
PRPF4-202ENST00000374199 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
PRPF4-202ENST00000374199 TLX1NBP0CAT3 122 aa8.28□□□□□ -1.08
PRPF4-202ENST00000374199 PPDPFLQ8WWR9 84 aa8.28□□□□□ -1.08
PRPF4-202ENST00000374199 NHLRC4P0CG21 123 aaPredicted RBP8.28□□□□□ -1.08
PRPF4-202ENST00000374199 XGP55808 180 aa8.27□□□□□ -1.08
PRPF4-202ENST00000374199 KRTAP21-3Q3LHN1 58 aa8.27□□□□□ -1.08
PRPF4-202ENST00000374199 MRAPQ8TCY5 172 aa8.27□□□□□ -1.09
PRPF4-202ENST00000374199 H0YGX0 51 aa8.27□□□□□ -1.09
PRPF4-202ENST00000374199 C1orf43Q9BWL3 253 aa8.26□□□□□ -1.09
PRPF4-202ENST00000374199 A0A1B0GX51 115 aa8.26□□□□□ -1.09
PRPF4-202ENST00000374199 OBSCN-AS1Q96MR7 158 aa8.25□□□□□ -1.09
PRPF4-202ENST00000374199 Q6ZRU5 148 aa8.24□□□□□ -1.09
PRPF4-202ENST00000374199 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
PRPF4-202ENST00000374199 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
PRPF4-202ENST00000374199 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
PRPF4-202ENST00000374199 MEGF8Q7Z7M0 2845 aa8.23□□□□□ -1.09
PRPF4-202ENST00000374199 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
PRPF4-202ENST00000374199 VPREB1P12018 145 aa8.23□□□□□ -1.09
PRPF4-202ENST00000374199 SLPIP03973 132 aa8.22□□□□□ -1.09
PRPF4-202ENST00000374199 A0A087WYN8 130 aa8.22□□□□□ -1.09
PRPF4-202ENST00000374199 ZNF561-AS1K7EIQ3 104 aa8.21□□□□□ -1.09
PRPF4-202ENST00000374199 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.09
PRPF4-202ENST00000374199 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.09
PRPF4-202ENST00000374199 IGLV5-37A0A075B6J1 123 aa8.21□□□□□ -1.1
PRPF4-202ENST00000374199 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.1
PRPF4-202ENST00000374199 MGAM2Q2M2H8 2515 aa8.2□□□□□ -1.1
PRPF4-202ENST00000374199 TRBV7-6A0A0J9YX20 115 aa8.2□□□□□ -1.1
PRPF4-202ENST00000374199 HIGD2BQ4VC39 106 aa8.2□□□□□ -1.1
PRPF4-202ENST00000374199 RMI2Q96E14 147 aa8.2□□□□□ -1.1
PRPF4-202ENST00000374199 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
PRPF4-202ENST00000374199 FAM240AA0A1B0GVK7 77 aa8.19□□□□□ -1.1
PRPF4-202ENST00000374199 CASC10Q5T4H9 136 aa8.19□□□□□ -1.1
PRPF4-202ENST00000374199 Q6ZRP5 223 aa8.19□□□□□ -1.1
PRPF4-202ENST00000374199 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
PRPF4-202ENST00000374199 TEX49A0A1B0GTD5 131 aa8.18□□□□□ -1.1
PRPF4-202ENST00000374199 SYCNQ0VAF6 134 aa8.18□□□□□ -1.1
PRPF4-202ENST00000374199 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
PRPF4-202ENST00000374199 ANAPC13Q9BS18 74 aa8.18□□□□□ -1.1
PRPF4-202ENST00000374199 STAB2Q8WWQ8 2551 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 NUPR2A6NF83 97 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 SS18L2Q9UHA2 77 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
PRPF4-202ENST00000374199 Q8N814 137 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 NCR3O14931 201 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
PRPF4-202ENST00000374199 LINC00575Q6W349 94 aa8.15□□□□□ -1.1
PRPF4-202ENST00000374199 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
PRPF4-202ENST00000374199 M0R378 163 aa8.14□□□□□ -1.11
PRPF4-202ENST00000374199 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
PRPF4-202ENST00000374199 B5MCH6 92 aa8.14□□□□□ -1.11
PRPF4-202ENST00000374199 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
PRPF4-202ENST00000374199 FRAS1Q86XX4 4008 aa8.13□□□□□ -1.11
PRPF4-202ENST00000374199 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
PRPF4-202ENST00000374199 ALMS1Q8TCU4 4167 aa8.13□□□□□ -1.11
PRPF4-202ENST00000374199 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
PRPF4-202ENST00000374199 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
PRPF4-202ENST00000374199 Q9HAA7 133 aa8.12□□□□□ -1.11
PRPF4-202ENST00000374199 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
PRPF4-202ENST00000374199 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
PRPF4-202ENST00000374199 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
PRPF4-202ENST00000374199 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
PRPF4-202ENST00000374199 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 LECT2O14960 151 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
PRPF4-202ENST00000374199 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 SNCGO76070 127 aa8.11□□□□□ -1.11
PRPF4-202ENST00000374199 KRTAP4-16G5E9R7 235 aaPredicted RBP8.1□□□□□ -1.11
PRPF4-202ENST00000374199 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
PRPF4-202ENST00000374199 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
PRPF4-202ENST00000374199 SPRR1AP35321 89 aa8.1□□□□□ -1.11
PRPF4-202ENST00000374199 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
PRPF4-202ENST00000374199 SERTAD4-AS1Q5TG53 156 aa8.09□□□□□ -1.11
PRPF4-202ENST00000374199 ZNF73O43830 326 aaPredicted RBP8.08□□□□□ -1.12
PRPF4-202ENST00000374199 H3BQ85 93 aa8.08□□□□□ -1.12
PRPF4-202ENST00000374199 TTC32Q5I0X7 151 aa8.08□□□□□ -1.12
PRPF4-202ENST00000374199 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
PRPF4-202ENST00000374199 ORMDL1Q9P0S3 153 aa8.08□□□□□ -1.12
PRPF4-202ENST00000374199 EPM2AB3EWF7 344 aa8.08□□□□□ -1.12
PRPF4-202ENST00000374199 ACYP1P07311 99 aa8.08□□□□□ -1.12
PRPF4-202ENST00000374199 CCDC179H3BU77 68 aa8.07□□□□□ -1.12
PRPF4-202ENST00000374199 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
PRPF4-202ENST00000374199 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms