RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 UPK3BQ9BT76 320 aa5.9□□□□□ -1.46
SNRNP40-202ENST00000373720 F8P00451 2351 aa5.89□□□□□ -1.47
SNRNP40-202ENST00000373720 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
SNRNP40-202ENST00000373720 TMEM256-PLSCR3K7ERE1 68 aa5.89□□□□□ -1.47
SNRNP40-202ENST00000373720 BAALC-AS2P0C853 105 aa5.89□□□□□ -1.47
SNRNP40-202ENST00000373720 SMIM11BQ8TCY0 68 aa5.89□□□□□ -1.47
SNRNP40-202ENST00000373720 Q6Q795 121 aa5.88□□□□□ -1.47
SNRNP40-202ENST00000373720 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
SNRNP40-202ENST00000373720 CLEC2BQ92478 149 aa5.88□□□□□ -1.47
SNRNP40-202ENST00000373720 LINC00167Q96N53 147 aa5.88□□□□□ -1.47
SNRNP40-202ENST00000373720 IMUPQ9GZP8 106 aa5.88□□□□□ -1.47
SNRNP40-202ENST00000373720 PKIGQ9Y2B9 76 aa5.88□□□□□ -1.47
SNRNP40-202ENST00000373720 PDE6GP18545 87 aa5.87□□□□□ -1.47
SNRNP40-202ENST00000373720 ESRGQ1W209 222 aa5.87□□□□□ -1.47
SNRNP40-202ENST00000373720 S100A7L2Q5SY68 101 aa5.87□□□□□ -1.47
SNRNP40-202ENST00000373720 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
SNRNP40-202ENST00000373720 TENM1Q9UKZ4 2725 aa5.87□□□□□ -1.47
SNRNP40-202ENST00000373720 IGLV10-54A0A075B6I4 117 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 NDUFC2-KCTD14E9PQ53 114 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 IGLV6-57P01721 117 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 TLX1NBP0CAT3 122 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 NHLRC4P0CG21 123 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 CLPSL2Q6UWE3 100 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 CAMK2N2Q96S95 79 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 VWFP04275 2813 aa5.86□□□□□ -1.47
SNRNP40-202ENST00000373720 TEX49A0A1B0GTD5 131 aa5.85□□□□□ -1.47
SNRNP40-202ENST00000373720 KRTAP26-1Q6PEX3 210 aa5.85□□□□□ -1.47
SNRNP40-202ENST00000373720 OBSCN-AS1Q96MR7 158 aa5.85□□□□□ -1.47
SNRNP40-202ENST00000373720 PLA2G2DQ9UNK4 145 aa5.85□□□□□ -1.47
SNRNP40-202ENST00000373720 NANOS2P60321 138 aaKnown RBP5.84□□□□□ -1.47
SNRNP40-202ENST00000373720 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.47
SNRNP40-202ENST00000373720 WFDC10BQ8IUB3 73 aa5.84□□□□□ -1.47
SNRNP40-202ENST00000373720 Q8N814 137 aa5.84□□□□□ -1.47
SNRNP40-202ENST00000373720 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
SNRNP40-202ENST00000373720 M0R378 163 aa5.83□□□□□ -1.48
SNRNP40-202ENST00000373720 SYCNQ0VAF6 134 aa5.82□□□□□ -1.48
SNRNP40-202ENST00000373720 SDIM1Q6ZPB5 146 aa5.82□□□□□ -1.48
SNRNP40-202ENST00000373720 LINC00643Q86TS7 51 aa5.82□□□□□ -1.48
SNRNP40-202ENST00000373720 RETNQ9HD89 108 aa5.82□□□□□ -1.48
SNRNP40-202ENST00000373720 C6orf48Q9UBA6 75 aa5.82□□□□□ -1.48
SNRNP40-202ENST00000373720 A0A1B0GV72 72 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 K7EIL1 84 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 LECT2O14960 151 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 GAGE2BQ13066 116 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 GAGE2EQ4V326 116 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 C14orf177Q52M58 125 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 LINC00575Q6W349 94 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 MRAPQ8TCY5 172 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 B9D2Q9BPU9 175 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 GAGE2DQ9UEU5 116 aa5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-202ENST00000373720 IGKV2D-24A0A075B6R9 120 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 NBEAL2Q6ZNJ1 2754 aa5.8□□□□□ -1.48
SNRNP40-202ENST00000373720 IGLV5-37A0A075B6J1 123 aa5.79□□□□□ -1.48
SNRNP40-202ENST00000373720 A0A087WYN8 130 aa5.79□□□□□ -1.48
SNRNP40-202ENST00000373720 TRBV7-7A0A0K0K1E9 115 aa5.79□□□□□ -1.48
SNRNP40-202ENST00000373720 A0A1B0GW54 56 aa5.79□□□□□ -1.48
SNRNP40-202ENST00000373720 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
SNRNP40-202ENST00000373720 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
SNRNP40-202ENST00000373720 ZNF73O43830 326 aaPredicted RBP5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 XGP55808 180 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 C6orf99Q4VX62 202 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 TTC32Q5I0X7 151 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 C6orf223Q8N319 242 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 LINC00588Q9Y4M8 146 aa5.78□□□□□ -1.48
SNRNP40-202ENST00000373720 NUPR2A6NF83 97 aa5.77□□□□□ -1.49
SNRNP40-202ENST00000373720 VPREB1P12018 145 aa5.77□□□□□ -1.49
SNRNP40-202ENST00000373720 COX7BP24311 80 aa5.77□□□□□ -1.49
SNRNP40-202ENST00000373720 C9orf116Q5BN46 136 aaPredicted RBP5.77□□□□□ -1.49
SNRNP40-202ENST00000373720 LOC110117498A0A087WWA1 95 aa5.76□□□□□ -1.49
SNRNP40-202ENST00000373720 CCKP06307 115 aa5.76□□□□□ -1.49
SNRNP40-202ENST00000373720 ELOF1P60002 83 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-202ENST00000373720 Q6ZRU5 148 aa5.76□□□□□ -1.49
SNRNP40-202ENST00000373720 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
SNRNP40-202ENST00000373720 TRBV10-3A0A0K0K1G6 114 aa5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 LOC107984640A0A0U1RRK4 108 aa5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 RPL18AQ02543 176 aaKnown RBP5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 NKAPP1Q8N9T2 125 aa5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 Q9HAA7 133 aa5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 DHRS4-AS1Q9P1J3 65 aa5.75□□□□□ -1.49
SNRNP40-202ENST00000373720 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
SNRNP40-202ENST00000373720 NCR3O14931 201 aa5.74□□□□□ -1.49
SNRNP40-202ENST00000373720 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
SNRNP40-202ENST00000373720 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-202ENST00000373720 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
SNRNP40-202ENST00000373720 PRYO14603 147 aa5.73□□□□□ -1.49
SNRNP40-202ENST00000373720 HIGD2BQ4VC39 106 aa5.73□□□□□ -1.49
SNRNP40-202ENST00000373720 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
SNRNP40-202ENST00000373720 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
SNRNP40-202ENST00000373720 PRR3P79522 188 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms