RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
PTP4A1-201ENST00000370651 Q6ZQT0 140 aa11.87□□□□□ -0.51
PTP4A1-201ENST00000370651 FHL3Q13643 280 aa11.84□□□□□ -0.51
PTP4A1-201ENST00000370651 KLK9Q2XQG4 91 aa11.84□□□□□ -0.51
PTP4A1-201ENST00000370651 LOC110117498A0A087WWA1 95 aa11.83□□□□□ -0.52
PTP4A1-201ENST00000370651 C6orf48Q9UBA6 75 aa11.83□□□□□ -0.52
PTP4A1-201ENST00000370651 PRLHP81277 87 aa11.83□□□□□ -0.52
PTP4A1-201ENST00000370651 C22orf24Q9Y442 160 aa11.83□□□□□ -0.52
PTP4A1-201ENST00000370651 SMCR5Q8TEV8 140 aa11.82□□□□□ -0.52
PTP4A1-201ENST00000370651 C1orf64Q8NEQ6 169 aa11.82□□□□□ -0.52
PTP4A1-201ENST00000370651 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
PTP4A1-201ENST00000370651 POLQO75417 2590 aa11.8□□□□□ -0.52
PTP4A1-201ENST00000370651 ELOF1P60002 83 aaKnown RBP11.8□□□□□ -0.52
PTP4A1-201ENST00000370651 LIMD2Q9BT23 127 aa11.8□□□□□ -0.52
PTP4A1-201ENST00000370651 COL27A1Q8IZC6 1860 aaPredicted RBP11.78□□□□□ -0.52
PTP4A1-201ENST00000370651 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
PTP4A1-201ENST00000370651 A0A1B0GW54 56 aa11.77□□□□□ -0.52
PTP4A1-201ENST00000370651 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.52
PTP4A1-201ENST00000370651 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
PTP4A1-201ENST00000370651 LINC01556Q5JQF7 62 aa11.75□□□□□ -0.53
PTP4A1-201ENST00000370651 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
PTP4A1-201ENST00000370651 EIF4EBP3O60516 100 aaPredicted RBP11.73□□□□□ -0.53
PTP4A1-201ENST00000370651 Q8NBF4 154 aa11.72□□□□□ -0.53
PTP4A1-201ENST00000370651 X6R8D5 127 aa11.71□□□□□ -0.53
PTP4A1-201ENST00000370651 COL4A2P08572 1712 aa11.7□□□□□ -0.54
PTP4A1-201ENST00000370651 RETNLBQ9BQ08 111 aa11.7□□□□□ -0.54
PTP4A1-201ENST00000370651 LY6G6CO95867 125 aa11.7□□□□□ -0.54
PTP4A1-201ENST00000370651 PCSK5Q92824 1860 aa11.69□□□□□ -0.54
PTP4A1-201ENST00000370651 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
PTP4A1-201ENST00000370651 UTRNP46939 3433 aa11.69□□□□□ -0.54
PTP4A1-201ENST00000370651 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
PTP4A1-201ENST00000370651 ACANP16112 2415 aa11.68□□□□□ -0.54
PTP4A1-201ENST00000370651 Q6ZRX8 168 aa11.67□□□□□ -0.54
PTP4A1-201ENST00000370651 TP53AIP1Q9HCN2 124 aa11.65□□□□□ -0.54
PTP4A1-201ENST00000370651 DNAH12Q6ZR08 3092 aa11.65□□□□□ -0.54
PTP4A1-201ENST00000370651 SPINK1P00995 79 aa11.65□□□□□ -0.54
PTP4A1-201ENST00000370651 LINC00476Q8WZB0 136 aa11.64□□□□□ -0.55
PTP4A1-201ENST00000370651 IGLV5-52A0A0A0MRZ9 124 aa11.64□□□□□ -0.55
PTP4A1-201ENST00000370651 IGLV6-57P01721 117 aa11.63□□□□□ -0.55
PTP4A1-201ENST00000370651 H3BPC8 53 aa11.63□□□□□ -0.55
PTP4A1-201ENST00000370651 GVQW2A0A096LPI5 108 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-201ENST00000370651 H3BNG1 76 aa11.62□□□□□ -0.55
PTP4A1-201ENST00000370651 ST20-AS1Q8NBB2 130 aa11.6□□□□□ -0.55
PTP4A1-201ENST00000370651 ERC2-IT1O76042 136 aa11.59□□□□□ -0.55
PTP4A1-201ENST00000370651 VPREB1P12018 145 aa11.59□□□□□ -0.55
PTP4A1-201ENST00000370651 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.56
PTP4A1-201ENST00000370651 TRAV22A0A0B4J277 110 aa11.57□□□□□ -0.56
PTP4A1-201ENST00000370651 KLKP1Q107X0 134 aa11.55□□□□□ -0.56
PTP4A1-201ENST00000370651 A0A1B0GU69 56 aa11.55□□□□□ -0.56
PTP4A1-201ENST00000370651 Q8NAQ8 132 aa11.54□□□□□ -0.56
PTP4A1-201ENST00000370651 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
PTP4A1-201ENST00000370651 Q6ZRP5 223 aa11.54□□□□□ -0.56
PTP4A1-201ENST00000370651 FSHBP01225 129 aa11.53□□□□□ -0.56
PTP4A1-201ENST00000370651 ACYP2P14621 99 aa11.53□□□□□ -0.56
PTP4A1-201ENST00000370651 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
PTP4A1-201ENST00000370651 IGKV2-30P06310 120 aa11.53□□□□□ -0.56
PTP4A1-201ENST00000370651 MOBPQ13875 183 aa11.53□□□□□ -0.56
PTP4A1-201ENST00000370651 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
PTP4A1-201ENST00000370651 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.57
PTP4A1-201ENST00000370651 K7EQZ3 153 aa11.5□□□□□ -0.57
PTP4A1-201ENST00000370651 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
PTP4A1-201ENST00000370651 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
PTP4A1-201ENST00000370651 PHF5AQ7RTV0 110 aaKnown RBP11.48□□□□□ -0.57
PTP4A1-201ENST00000370651 EPM2AB3EWF7 344 aa11.48□□□□□ -0.57
PTP4A1-201ENST00000370651 CSNK1G2-AS1Q8NCQ2 148 aa11.47□□□□□ -0.57
PTP4A1-201ENST00000370651 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
PTP4A1-201ENST00000370651 H7BZZ5 65 aa11.47□□□□□ -0.57
PTP4A1-201ENST00000370651 A8MUN3 132 aa11.46□□□□□ -0.57
PTP4A1-201ENST00000370651 C7orf65Q6ZTY9 151 aa11.45□□□□□ -0.58
PTP4A1-201ENST00000370651 F8P00451 2351 aa11.45□□□□□ -0.58
PTP4A1-201ENST00000370651 C16orf90A8MZG2 172 aa11.45□□□□□ -0.58
PTP4A1-201ENST00000370651 C9orf129Q5T035 196 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-201ENST00000370651 KCNQ1DNQ9H478 68 aa11.45□□□□□ -0.58
PTP4A1-201ENST00000370651 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
PTP4A1-201ENST00000370651 SERTAD4-AS1Q5TG53 156 aa11.43□□□□□ -0.58
PTP4A1-201ENST00000370651 A8MWP4 228 aa11.42□□□□□ -0.58
PTP4A1-201ENST00000370651 LINC00588Q9Y4M8 146 aa11.41□□□□□ -0.58
PTP4A1-201ENST00000370651 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
PTP4A1-201ENST00000370651 IGLV1-50A0A075B6I6 118 aa11.4□□□□□ -0.59
PTP4A1-201ENST00000370651 MDFIQ99750 246 aa11.39□□□□□ -0.59
PTP4A1-201ENST00000370651 PRR34Q9NV39 138 aa11.39□□□□□ -0.59
PTP4A1-201ENST00000370651 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
PTP4A1-201ENST00000370651 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
PTP4A1-201ENST00000370651 CYP4F30PQ9H0H9 118 aa11.38□□□□□ -0.59
PTP4A1-201ENST00000370651 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
PTP4A1-201ENST00000370651 COA5Q86WW8 74 aa11.38□□□□□ -0.59
PTP4A1-201ENST00000370651 SPACA4Q8TDM5 124 aa11.38□□□□□ -0.59
PTP4A1-201ENST00000370651 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
PTP4A1-201ENST00000370651 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
PTP4A1-201ENST00000370651 Q8N377 158 aa11.36□□□□□ -0.59
PTP4A1-201ENST00000370651 LOC101927531A0A1B0GV80 90 aa11.36□□□□□ -0.59
PTP4A1-201ENST00000370651 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
PTP4A1-201ENST00000370651 IGFL1Q6UW32 110 aa11.34□□□□□ -0.59
PTP4A1-201ENST00000370651 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
PTP4A1-201ENST00000370651 LINC00313P59037 77 aa11.33□□□□□ -0.6
PTP4A1-201ENST00000370651 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
PTP4A1-201ENST00000370651 C19orf73Q9NVV2 129 aa11.31□□□□□ -0.6
PTP4A1-201ENST00000370651 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
PTP4A1-201ENST00000370651 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
PTP4A1-201ENST00000370651 PRR15Q8IV56 129 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms