RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 C6orf223Q8N319 242 aa11.53□□□□□ -0.56
UBE3D-203ENST00000369747 PPDPFLQ8WWR9 84 aa11.52□□□□□ -0.56
UBE3D-203ENST00000369747 RPL28P46779 137 aaKnown RBP11.52□□□□□ -0.57
UBE3D-203ENST00000369747 C10orf25Q5T742 122 aa11.52□□□□□ -0.57
UBE3D-203ENST00000369747 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.57
UBE3D-203ENST00000369747 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
UBE3D-203ENST00000369747 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
UBE3D-203ENST00000369747 UNQ6190/PRO20217Q6UXQ8 127 aa11.5□□□□□ -0.57
UBE3D-203ENST00000369747 LY6G6CO95867 125 aa11.5□□□□□ -0.57
UBE3D-203ENST00000369747 DNAH10Q8IVF4 4471 aa11.5□□□□□ -0.57
UBE3D-203ENST00000369747 SMIM11BQ8TCY0 68 aa11.49□□□□□ -0.57
UBE3D-203ENST00000369747 LINC00476Q8WZB0 136 aa11.49□□□□□ -0.57
UBE3D-203ENST00000369747 H3BT86 120 aa11.48□□□□□ -0.57
UBE3D-203ENST00000369747 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
UBE3D-203ENST00000369747 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
UBE3D-203ENST00000369747 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
UBE3D-203ENST00000369747 Q9HAA7 133 aa11.47□□□□□ -0.57
UBE3D-203ENST00000369747 NBDYA0A0U1RRE5 68 aa11.46□□□□□ -0.58
UBE3D-203ENST00000369747 NDUFC2O95298 119 aa11.46□□□□□ -0.58
UBE3D-203ENST00000369747 ALMS1Q8TCU4 4167 aa11.46□□□□□ -0.58
UBE3D-203ENST00000369747 M0R2N4 97 aa11.45□□□□□ -0.58
UBE3D-203ENST00000369747 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
UBE3D-203ENST00000369747 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
UBE3D-203ENST00000369747 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
UBE3D-203ENST00000369747 GVQW2A0A096LPI5 108 aaPredicted RBP11.45□□□□□ -0.58
UBE3D-203ENST00000369747 TRACP01848 142 aa11.45□□□□□ -0.58
UBE3D-203ENST00000369747 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
UBE3D-203ENST00000369747 DNAH2Q9P225 4427 aa11.44□□□□□ -0.58
UBE3D-203ENST00000369747 Q8NDZ9 215 aa11.43□□□□□ -0.58
UBE3D-203ENST00000369747 TEX49A0A1B0GTD5 131 aa11.43□□□□□ -0.58
UBE3D-203ENST00000369747 C6orf48Q9UBA6 75 aa11.43□□□□□ -0.58
UBE3D-203ENST00000369747 IGKV2D-24A0A075B6R9 120 aa11.41□□□□□ -0.58
UBE3D-203ENST00000369747 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
UBE3D-203ENST00000369747 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
UBE3D-203ENST00000369747 TTC32Q5I0X7 151 aa11.41□□□□□ -0.58
UBE3D-203ENST00000369747 C1orf43Q9BWL3 253 aa11.41□□□□□ -0.58
UBE3D-203ENST00000369747 H0YGX0 51 aa11.39□□□□□ -0.59
UBE3D-203ENST00000369747 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
UBE3D-203ENST00000369747 CDIP1Q9H305 208 aa11.39□□□□□ -0.59
UBE3D-203ENST00000369747 A0A087WYN8 130 aa11.39□□□□□ -0.59
UBE3D-203ENST00000369747 Q6ZR54 194 aa11.39□□□□□ -0.59
UBE3D-203ENST00000369747 NCR3O14931 201 aa11.37□□□□□ -0.59
UBE3D-203ENST00000369747 CAMK2N2Q96S95 79 aa11.37□□□□□ -0.59
UBE3D-203ENST00000369747 PCP4P48539 62 aa11.37□□□□□ -0.59
UBE3D-203ENST00000369747 TMEM126AQ9H061 195 aa11.37□□□□□ -0.59
UBE3D-203ENST00000369747 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
UBE3D-203ENST00000369747 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
UBE3D-203ENST00000369747 Q6ZRU5 148 aa11.35□□□□□ -0.59
UBE3D-203ENST00000369747 C2orf48Q96LS8 159 aa11.35□□□□□ -0.59
UBE3D-203ENST00000369747 C22orf24Q9Y442 160 aa11.35□□□□□ -0.59
UBE3D-203ENST00000369747 SIGMAR1Q99720 223 aa11.35□□□□□ -0.59
UBE3D-203ENST00000369747 LCE6AA0A183 80 aa11.33□□□□□ -0.6
UBE3D-203ENST00000369747 RMI2Q96E14 147 aa11.33□□□□□ -0.6
UBE3D-203ENST00000369747 LECT2O14960 151 aa11.32□□□□□ -0.6
UBE3D-203ENST00000369747 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
UBE3D-203ENST00000369747 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
UBE3D-203ENST00000369747 DNAL4O96015 105 aa11.31□□□□□ -0.6
UBE3D-203ENST00000369747 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
UBE3D-203ENST00000369747 RYR2Q92736 4967 aa11.3□□□□□ -0.6
UBE3D-203ENST00000369747 F8WDY8 70 aa11.29□□□□□ -0.6
UBE3D-203ENST00000369747 PSCAO43653 123 aa11.29□□□□□ -0.6
UBE3D-203ENST00000369747 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
UBE3D-203ENST00000369747 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
UBE3D-203ENST00000369747 FRAS1Q86XX4 4008 aa11.27□□□□□ -0.6
UBE3D-203ENST00000369747 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.6
UBE3D-203ENST00000369747 XGP55808 180 aa11.27□□□□□ -0.6
UBE3D-203ENST00000369747 C6orf99Q4VX62 202 aa11.27□□□□□ -0.6
UBE3D-203ENST00000369747 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.6
UBE3D-203ENST00000369747 SYCNQ0VAF6 134 aa11.27□□□□□ -0.61
UBE3D-203ENST00000369747 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
UBE3D-203ENST00000369747 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
UBE3D-203ENST00000369747 A0A1B0GX51 115 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 SLPIP03973 132 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 MT-ATP8P03928 68 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 VPREB1P12018 145 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 Q6ZRP5 223 aa11.25□□□□□ -0.61
UBE3D-203ENST00000369747 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
UBE3D-203ENST00000369747 Q8N814 137 aa11.24□□□□□ -0.61
UBE3D-203ENST00000369747 RYR3Q15413 4870 aa11.23□□□□□ -0.61
UBE3D-203ENST00000369747 FAM240AA0A1B0GVK7 77 aa11.23□□□□□ -0.61
UBE3D-203ENST00000369747 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
UBE3D-203ENST00000369747 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
UBE3D-203ENST00000369747 LRCOL1A6NCL2 159 aa11.22□□□□□ -0.61
UBE3D-203ENST00000369747 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
UBE3D-203ENST00000369747 ORMDL1Q9P0S3 153 aa11.22□□□□□ -0.61
UBE3D-203ENST00000369747 RTL8CO15255 209 aa11.21□□□□□ -0.62
UBE3D-203ENST00000369747 LINC00575Q6W349 94 aa11.21□□□□□ -0.62
UBE3D-203ENST00000369747 FAT2Q9NYQ8 4349 aa11.2□□□□□ -0.62
UBE3D-203ENST00000369747 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
UBE3D-203ENST00000369747 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
UBE3D-203ENST00000369747 OBSCN-AS1Q96MR7 158 aa11.19□□□□□ -0.62
UBE3D-203ENST00000369747 INAFM2P0DMQ5 153 aa11.19□□□□□ -0.62
UBE3D-203ENST00000369747 M0R378 163 aa11.18□□□□□ -0.62
UBE3D-203ENST00000369747 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
UBE3D-203ENST00000369747 TNP2Q05952 138 aa11.17□□□□□ -0.62
UBE3D-203ENST00000369747 A0A087WTM6 91 aa11.16□□□□□ -0.62
UBE3D-203ENST00000369747 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
UBE3D-203ENST00000369747 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms