RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
FAM3A-204ENST00000369643 A0A1W2PNN7 141 aa11.65□□□□□ -0.55
FAM3A-204ENST00000369643 DLEU1O43261 78 aa11.65□□□□□ -0.55
FAM3A-204ENST00000369643 Q8NDZ9 215 aa11.65□□□□□ -0.55
FAM3A-204ENST00000369643 DAND5Q8N907 189 aa11.64□□□□□ -0.55
FAM3A-204ENST00000369643 A0A087WYN8 130 aa11.63□□□□□ -0.55
FAM3A-204ENST00000369643 A0A0J9YXY3 114 aa11.63□□□□□ -0.55
FAM3A-204ENST00000369643 BATFQ16520 125 aa11.63□□□□□ -0.55
FAM3A-204ENST00000369643 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
FAM3A-204ENST00000369643 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
FAM3A-204ENST00000369643 ZNF815PA8K554 130 aa11.61□□□□□ -0.55
FAM3A-204ENST00000369643 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
FAM3A-204ENST00000369643 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
FAM3A-204ENST00000369643 LITAFQ99732 161 aa11.61□□□□□ -0.55
FAM3A-204ENST00000369643 BOD1L2Q8IYS8 172 aa11.6□□□□□ -0.55
FAM3A-204ENST00000369643 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
FAM3A-204ENST00000369643 MEIG1Q5JSS6 88 aa11.59□□□□□ -0.55
FAM3A-204ENST00000369643 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
FAM3A-204ENST00000369643 SMR3BP02814 79 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-204ENST00000369643 LINC00158P58513 81 aa11.58□□□□□ -0.56
FAM3A-204ENST00000369643 HERV-K104P63124 156 aa11.58□□□□□ -0.56
FAM3A-204ENST00000369643 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
FAM3A-204ENST00000369643 PKHD1L1Q86WI1 4243 aa11.58□□□□□ -0.56
FAM3A-204ENST00000369643 CDK2AP2O75956 126 aa11.57□□□□□ -0.56
FAM3A-204ENST00000369643 FAM19A5Q7Z5A7 132 aaPredicted RBP11.57□□□□□ -0.56
FAM3A-204ENST00000369643 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
FAM3A-204ENST00000369643 EPM2AB3EWF7 344 aa11.56□□□□□ -0.56
FAM3A-204ENST00000369643 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
FAM3A-204ENST00000369643 KRTAP11-1Q8IUC1 163 aa11.56□□□□□ -0.56
FAM3A-204ENST00000369643 ABCA13Q86UQ4 5058 aa11.56□□□□□ -0.56
FAM3A-204ENST00000369643 C2orf91Q6ZV80 131 aa11.55□□□□□ -0.56
FAM3A-204ENST00000369643 NPC2P61916 151 aa11.55□□□□□ -0.56
FAM3A-204ENST00000369643 COX17Q14061 63 aa11.55□□□□□ -0.56
FAM3A-204ENST00000369643 BVES-AS1Q5T3Y7 98 aa11.55□□□□□ -0.56
FAM3A-204ENST00000369643 SFTA2Q6UW10 78 aa11.55□□□□□ -0.56
FAM3A-204ENST00000369643 PHF5AQ7RTV0 110 aaKnown RBP11.55□□□□□ -0.56
FAM3A-204ENST00000369643 DPH3Q96FX2 82 aa11.54□□□□□ -0.56
FAM3A-204ENST00000369643 HIGD1BQ9P298 99 aa11.54□□□□□ -0.56
FAM3A-204ENST00000369643 HSD52Q0P140 79 aa11.53□□□□□ -0.56
FAM3A-204ENST00000369643 VPREB1P12018 145 aa11.5□□□□□ -0.57
FAM3A-204ENST00000369643 PRR3P79522 188 aaKnown RBP11.5□□□□□ -0.57
FAM3A-204ENST00000369643 LINC00474Q9P2X8 69 aa11.5□□□□□ -0.57
FAM3A-204ENST00000369643 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
FAM3A-204ENST00000369643 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
FAM3A-204ENST00000369643 A6NDN8 102 aa11.47□□□□□ -0.57
FAM3A-204ENST00000369643 M0QXV9 152 aa11.47□□□□□ -0.57
FAM3A-204ENST00000369643 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
FAM3A-204ENST00000369643 LINC00528Q8N1L1 170 aa11.47□□□□□ -0.57
FAM3A-204ENST00000369643 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
FAM3A-204ENST00000369643 TIMM17BO60830 172 aa11.46□□□□□ -0.57
FAM3A-204ENST00000369643 KRTAP10-4P60372 401 aaPredicted RBP11.46□□□□□ -0.57
FAM3A-204ENST00000369643 LINC00308Q8TCZ7 52 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 LOC107984156A0A0G2JMH3 177 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 TAL2Q16559 108 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 ARL17AQ8IVW1 177 aa11.45□□□□□ -0.58
FAM3A-204ENST00000369643 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
FAM3A-204ENST00000369643 NCR3O14931 201 aa11.44□□□□□ -0.58
FAM3A-204ENST00000369643 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
FAM3A-204ENST00000369643 SPANXDQ9BXN6 97 aa11.44□□□□□ -0.58
FAM3A-204ENST00000369643 SPANXCQ9NY87 97 aa11.44□□□□□ -0.58
FAM3A-204ENST00000369643 TAX1BP3O14907 124 aa11.42□□□□□ -0.58
FAM3A-204ENST00000369643 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
FAM3A-204ENST00000369643 RPL37AP8A6NKH3 93 aa11.4□□□□□ -0.58
FAM3A-204ENST00000369643 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
FAM3A-204ENST00000369643 TMEM238C9JI98 176 aa11.4□□□□□ -0.59
FAM3A-204ENST00000369643 Q5VSD8 79 aa11.4□□□□□ -0.59
FAM3A-204ENST00000369643 MRPL55Q7Z7F7 128 aaKnown RBP11.4□□□□□ -0.59
FAM3A-204ENST00000369643 Q8N1X5 172 aa11.4□□□□□ -0.59
FAM3A-204ENST00000369643 IGKV2-28A0A075B6P5 120 aa11.39□□□□□ -0.59
FAM3A-204ENST00000369643 IGKV2D-28P01615 120 aa11.39□□□□□ -0.59
FAM3A-204ENST00000369643 SPANXB1Q9NS25 103 aaPredicted RBP11.39□□□□□ -0.59
FAM3A-204ENST00000369643 PSORS1C2Q9UIG4 136 aa11.38□□□□□ -0.59
FAM3A-204ENST00000369643 UBE2V1Q13404 147 aa11.36□□□□□ -0.59
FAM3A-204ENST00000369643 CEND1Q8N111 149 aa11.36□□□□□ -0.59
FAM3A-204ENST00000369643 NKAPP1Q8N9T2 125 aa11.36□□□□□ -0.59
FAM3A-204ENST00000369643 PCLOQ9Y6V0 5065 aa11.36□□□□□ -0.59
FAM3A-204ENST00000369643 VAMP3Q15836 100 aa11.35□□□□□ -0.59
FAM3A-204ENST00000369643 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
FAM3A-204ENST00000369643 RPL37AP61513 92 aaKnown RBP11.34□□□□□ -0.59
FAM3A-204ENST00000369643 RPL24P83731 157 aaKnown RBP11.34□□□□□ -0.59
FAM3A-204ENST00000369643 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
FAM3A-204ENST00000369643 LRP1Q07954 4544 aaKnown RBP11.33□□□□□ -0.6
FAM3A-204ENST00000369643 IGLV1-50A0A075B6I6 118 aa11.33□□□□□ -0.6
FAM3A-204ENST00000369643 UBE2BP63146 152 aa11.33□□□□□ -0.6
FAM3A-204ENST00000369643 LINC00337Q8N6G1 96 aa11.33□□□□□ -0.6
FAM3A-204ENST00000369643 HIST1H4GQ99525 98 aa11.33□□□□□ -0.6
FAM3A-204ENST00000369643 MYCBP2O75592 4640 aa11.33□□□□□ -0.6
FAM3A-204ENST00000369643 TRBV10-3A0A0K0K1G6 114 aa11.32□□□□□ -0.6
FAM3A-204ENST00000369643 NDUFC2O95298 119 aa11.32□□□□□ -0.6
FAM3A-204ENST00000369643 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
FAM3A-204ENST00000369643 M0R378 163 aa11.31□□□□□ -0.6
FAM3A-204ENST00000369643 Q6ZVH6 145 aa11.31□□□□□ -0.6
FAM3A-204ENST00000369643 IFITM1P13164 125 aa11.3□□□□□ -0.6
FAM3A-204ENST00000369643 FXYD2P54710 66 aa11.3□□□□□ -0.6
FAM3A-204ENST00000369643 A4D1N5 150 aa11.3□□□□□ -0.6
FAM3A-204ENST00000369643 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
FAM3A-204ENST00000369643 A6NJY4 79 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms