RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 HSBP1L1C9JCN9 74 aa11.23□□□□□ -0.61
CLK2-202ENST00000361168 LITAFQ99732 161 aa11.23□□□□□ -0.61
CLK2-202ENST00000361168 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
CLK2-202ENST00000361168 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
CLK2-202ENST00000361168 NPC2P61916 151 aa11.21□□□□□ -0.61
CLK2-202ENST00000361168 EPM2AB3EWF7 344 aa11.21□□□□□ -0.62
CLK2-202ENST00000361168 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
CLK2-202ENST00000361168 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
CLK2-202ENST00000361168 C14orf144Q96I85 54 aa11.2□□□□□ -0.62
CLK2-202ENST00000361168 LOC105371267A0A1B0GV96 52 aa11.19□□□□□ -0.62
CLK2-202ENST00000361168 VAMP8Q9BV40 100 aa11.19□□□□□ -0.62
CLK2-202ENST00000361168 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
CLK2-202ENST00000361168 SOSTDC1Q6X4U4 206 aa11.19□□□□□ -0.62
CLK2-202ENST00000361168 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
CLK2-202ENST00000361168 KRTAP4-5Q9BYR2 181 aa11.18□□□□□ -0.62
CLK2-202ENST00000361168 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
CLK2-202ENST00000361168 M0QXV9 152 aa11.17□□□□□ -0.62
CLK2-202ENST00000361168 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
CLK2-202ENST00000361168 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
CLK2-202ENST00000361168 VPREB1P12018 145 aa11.15□□□□□ -0.62
CLK2-202ENST00000361168 BOD1L2Q8IYS8 172 aa11.15□□□□□ -0.62
CLK2-202ENST00000361168 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
CLK2-202ENST00000361168 COX8AP10176 69 aa11.15□□□□□ -0.62
CLK2-202ENST00000361168 ABCA13Q86UQ4 5058 aa11.14□□□□□ -0.63
CLK2-202ENST00000361168 Q8N1X5 172 aa11.13□□□□□ -0.63
CLK2-202ENST00000361168 Q5VSD8 79 aa11.13□□□□□ -0.63
CLK2-202ENST00000361168 PLA2G2DQ9UNK4 145 aa11.13□□□□□ -0.63
CLK2-202ENST00000361168 TIMM17BO60830 172 aa11.12□□□□□ -0.63
CLK2-202ENST00000361168 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
CLK2-202ENST00000361168 KRTAP10-4P60372 401 aaPredicted RBP11.11□□□□□ -0.63
CLK2-202ENST00000361168 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
CLK2-202ENST00000361168 MRPL55Q7Z7F7 128 aaKnown RBP11.11□□□□□ -0.63
CLK2-202ENST00000361168 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
CLK2-202ENST00000361168 LINC00167Q96N53 147 aa11.1□□□□□ -0.63
CLK2-202ENST00000361168 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CLK2-202ENST00000361168 NCR3O14931 201 aa11.09□□□□□ -0.63
CLK2-202ENST00000361168 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CLK2-202ENST00000361168 IGLV5-37A0A075B6J1 123 aa11.09□□□□□ -0.63
CLK2-202ENST00000361168 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
CLK2-202ENST00000361168 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
CLK2-202ENST00000361168 IGKV2-28A0A075B6P5 120 aa11.08□□□□□ -0.64
CLK2-202ENST00000361168 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
CLK2-202ENST00000361168 IGKV2D-28P01615 120 aa11.08□□□□□ -0.64
CLK2-202ENST00000361168 PSORS1C2Q9UIG4 136 aa11.08□□□□□ -0.64
CLK2-202ENST00000361168 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
CLK2-202ENST00000361168 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
CLK2-202ENST00000361168 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
CLK2-202ENST00000361168 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
CLK2-202ENST00000361168 UBE2BP63146 152 aa11.07□□□□□ -0.64
CLK2-202ENST00000361168 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
CLK2-202ENST00000361168 C2orf91Q6ZV80 131 aa11.07□□□□□ -0.64
CLK2-202ENST00000361168 DLEU1O43261 78 aa11.06□□□□□ -0.64
CLK2-202ENST00000361168 SLC25A34Q6PIV7 304 aa11.06□□□□□ -0.64
CLK2-202ENST00000361168 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
CLK2-202ENST00000361168 PCLOQ9Y6V0 5065 aa11.06□□□□□ -0.64
CLK2-202ENST00000361168 RPL37AP61513 92 aaKnown RBP11.05□□□□□ -0.64
CLK2-202ENST00000361168 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
CLK2-202ENST00000361168 S100A12P80511 92 aa11.03□□□□□ -0.64
CLK2-202ENST00000361168 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLK2-202ENST00000361168 SMIM6P0DI80 62 aa11.03□□□□□ -0.64
CLK2-202ENST00000361168 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
CLK2-202ENST00000361168 SPANXB1Q9NS25 103 aaPredicted RBP11.02□□□□□ -0.65
CLK2-202ENST00000361168 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
CLK2-202ENST00000361168 IGLV1-50A0A075B6I6 118 aa11.01□□□□□ -0.65
CLK2-202ENST00000361168 M0R378 163 aa11.01□□□□□ -0.65
CLK2-202ENST00000361168 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
CLK2-202ENST00000361168 TRBV10-3A0A0K0K1G6 114 aa11.01□□□□□ -0.65
CLK2-202ENST00000361168 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
CLK2-202ENST00000361168 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
CLK2-202ENST00000361168 NDUFC2O95298 119 aa11□□□□□ -0.65
CLK2-202ENST00000361168 Q6ZVH6 145 aa10.99□□□□□ -0.65
CLK2-202ENST00000361168 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
CLK2-202ENST00000361168 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
CLK2-202ENST00000361168 IFITM1P13164 125 aa10.98□□□□□ -0.65
CLK2-202ENST00000361168 LINC00337Q8N6G1 96 aa10.98□□□□□ -0.65
CLK2-202ENST00000361168 C12orf57Q99622 126 aa10.97□□□□□ -0.65
CLK2-202ENST00000361168 HIGD1BQ9P298 99 aa10.97□□□□□ -0.65
CLK2-202ENST00000361168 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.66
CLK2-202ENST00000361168 A4D1N5 150 aa10.96□□□□□ -0.66
CLK2-202ENST00000361168 DDTP30046 118 aa10.96□□□□□ -0.66
CLK2-202ENST00000361168 TMEM126AQ9H061 195 aa10.96□□□□□ -0.66
CLK2-202ENST00000361168 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
CLK2-202ENST00000361168 UQCR10Q9UDW1 63 aa10.95□□□□□ -0.66
CLK2-202ENST00000361168 PKHD1L1Q86WI1 4243 aa10.94□□□□□ -0.66
CLK2-202ENST00000361168 IGLV7-43P04211 117 aa10.93□□□□□ -0.66
CLK2-202ENST00000361168 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
CLK2-202ENST00000361168 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
CLK2-202ENST00000361168 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
CLK2-202ENST00000361168 PPDPFQ9H3Y8 114 aa10.92□□□□□ -0.66
CLK2-202ENST00000361168 KCNQ1DNQ9H478 68 aa10.92□□□□□ -0.66
CLK2-202ENST00000361168 PRLHP81277 87 aa10.91□□□□□ -0.66
CLK2-202ENST00000361168 LINC00518Q8N0U6 118 aa10.91□□□□□ -0.66
CLK2-202ENST00000361168 BCE1O60756 84 aa10.9□□□□□ -0.66
CLK2-202ENST00000361168 COPS9Q8WXC6 57 aa10.9□□□□□ -0.66
CLK2-202ENST00000361168 A6NDN8 102 aa10.89□□□□□ -0.67
CLK2-202ENST00000361168 FXYD2P54710 66 aa10.89□□□□□ -0.67
CLK2-202ENST00000361168 KRTAP4-16G5E9R7 235 aaPredicted RBP10.88□□□□□ -0.67
CLK2-202ENST00000361168 CEND1Q8N111 149 aa10.88□□□□□ -0.67
CLK2-202ENST00000361168 TRAV23DV6A0A075B6W5 121 aa10.88□□□□□ -0.67
CLK2-202ENST00000361168 SPRR1AP35321 89 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms