RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
HLA-DRB1-201ENST00000360004 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
HLA-DRB1-201ENST00000360004 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
HLA-DRB1-201ENST00000360004 PRR3P79522 188 aaKnown RBP11.95□□□□□ -0.5
HLA-DRB1-201ENST00000360004 MRPL55Q7Z7F7 128 aaKnown RBP11.94□□□□□ -0.5
HLA-DRB1-201ENST00000360004 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
HLA-DRB1-201ENST00000360004 PLA2G2DQ9UNK4 145 aa11.94□□□□□ -0.5
HLA-DRB1-201ENST00000360004 KRTAP7-1Q8IUC3 87 aa11.93□□□□□ -0.5
HLA-DRB1-201ENST00000360004 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
HLA-DRB1-201ENST00000360004 IGKV2D-26A0A0A0MRZ7 120 aa11.92□□□□□ -0.5
HLA-DRB1-201ENST00000360004 A0A0J9YXY3 114 aa11.92□□□□□ -0.5
HLA-DRB1-201ENST00000360004 GAGE10A6NGK3 116 aa11.92□□□□□ -0.5
HLA-DRB1-201ENST00000360004 C1orf137Q5JT78 98 aa11.92□□□□□ -0.5
HLA-DRB1-201ENST00000360004 ANKRD39Q53RE8 183 aa11.91□□□□□ -0.5
HLA-DRB1-201ENST00000360004 BOD1L2Q8IYS8 172 aa11.91□□□□□ -0.5
HLA-DRB1-201ENST00000360004 DAND5Q8N907 189 aa11.91□□□□□ -0.5
HLA-DRB1-201ENST00000360004 PSORS1C2Q9UIG4 136 aa11.91□□□□□ -0.5
HLA-DRB1-201ENST00000360004 FAT1Q14517 4588 aa11.91□□□□□ -0.5
HLA-DRB1-201ENST00000360004 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.5
HLA-DRB1-201ENST00000360004 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.51
HLA-DRB1-201ENST00000360004 TTTY13Q9BZ97 58 aa11.89□□□□□ -0.51
HLA-DRB1-201ENST00000360004 IGLV5-37A0A075B6J1 123 aa11.88□□□□□ -0.51
HLA-DRB1-201ENST00000360004 RPL37AP8A6NKH3 93 aa11.88□□□□□ -0.51
HLA-DRB1-201ENST00000360004 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
HLA-DRB1-201ENST00000360004 LINC00167Q96N53 147 aa11.88□□□□□ -0.51
HLA-DRB1-201ENST00000360004 VPREB1P12018 145 aa11.87□□□□□ -0.51
HLA-DRB1-201ENST00000360004 NPC2P61916 151 aa11.86□□□□□ -0.51
HLA-DRB1-201ENST00000360004 VPS13BQ7Z7G8 4022 aa11.85□□□□□ -0.51
HLA-DRB1-201ENST00000360004 ABCA13Q86UQ4 5058 aa11.85□□□□□ -0.51
HLA-DRB1-201ENST00000360004 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
HLA-DRB1-201ENST00000360004 NCR3O14931 201 aa11.84□□□□□ -0.51
HLA-DRB1-201ENST00000360004 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
HLA-DRB1-201ENST00000360004 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
HLA-DRB1-201ENST00000360004 TIMM17BO60830 172 aa11.83□□□□□ -0.52
HLA-DRB1-201ENST00000360004 HNRNPA3P51991 378 aaKnown RBP11.83□□□□□ -0.52
HLA-DRB1-201ENST00000360004 KRTAP11-1Q8IUC1 163 aa11.83□□□□□ -0.52
HLA-DRB1-201ENST00000360004 M0R378 163 aa11.82□□□□□ -0.52
HLA-DRB1-201ENST00000360004 PCP2Q8IVA1 136 aa11.82□□□□□ -0.52
HLA-DRB1-201ENST00000360004 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
HLA-DRB1-201ENST00000360004 IGLV7-43P04211 117 aa11.8□□□□□ -0.52
HLA-DRB1-201ENST00000360004 S100A12P80511 92 aa11.8□□□□□ -0.52
HLA-DRB1-201ENST00000360004 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
HLA-DRB1-201ENST00000360004 Q8NDZ9 215 aa11.8□□□□□ -0.52
HLA-DRB1-201ENST00000360004 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
HLA-DRB1-201ENST00000360004 IGLV1-50A0A075B6I6 118 aa11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 LOC107984156A0A0G2JMH3 177 aa11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 JOSD1Q15040 202 aaPredicted RBP11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 ARL17AQ8IVW1 177 aa11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 LINC00308Q8TCZ7 52 aa11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 VAMP8Q9BV40 100 aa11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 SPANXB1Q9NS25 103 aaPredicted RBP11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.53
HLA-DRB1-201ENST00000360004 BCE1O60756 84 aa11.76□□□□□ -0.53
HLA-DRB1-201ENST00000360004 UBE2AP49459 152 aa11.76□□□□□ -0.53
HLA-DRB1-201ENST00000360004 S100A7L2Q5SY68 101 aa11.76□□□□□ -0.53
HLA-DRB1-201ENST00000360004 LITAFQ99732 161 aa11.76□□□□□ -0.53
HLA-DRB1-201ENST00000360004 NDUFC2O95298 119 aa11.75□□□□□ -0.53
HLA-DRB1-201ENST00000360004 REG3GQ6UW15 175 aa11.75□□□□□ -0.53
HLA-DRB1-201ENST00000360004 DIRC1Q969H9 104 aa11.75□□□□□ -0.53
HLA-DRB1-201ENST00000360004 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
HLA-DRB1-201ENST00000360004 J3QL48 77 aa11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 RPL28P46779 137 aaKnown RBP11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 SPATA45Q537H7 98 aa11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 SOSTDC1Q6X4U4 206 aa11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 SPANXDQ9BXN6 97 aa11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 SPANXCQ9NY87 97 aa11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 FLG2Q5D862 2391 aaPredicted RBP11.74□□□□□ -0.53
HLA-DRB1-201ENST00000360004 TRBV10-2A0A0K0K1G8 114 aa11.73□□□□□ -0.53
HLA-DRB1-201ENST00000360004 SRSF9Q13242 221 aaKnown RBP eCLIP11.73□□□□□ -0.53
HLA-DRB1-201ENST00000360004 FAM19A1Q7Z5A9 133 aa11.73□□□□□ -0.53
HLA-DRB1-201ENST00000360004 TMEM126AQ9H061 195 aa11.73□□□□□ -0.53
HLA-DRB1-201ENST00000360004 DDTP30046 118 aa11.72□□□□□ -0.53
HLA-DRB1-201ENST00000360004 Q6ZVH6 145 aa11.72□□□□□ -0.53
HLA-DRB1-201ENST00000360004 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.53
HLA-DRB1-201ENST00000360004 PRYO14603 147 aa11.71□□□□□ -0.53
HLA-DRB1-201ENST00000360004 ZNF861PO60384 105 aa11.71□□□□□ -0.53
HLA-DRB1-201ENST00000360004 IFITM1P13164 125 aa11.71□□□□□ -0.53
HLA-DRB1-201ENST00000360004 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
HLA-DRB1-201ENST00000360004 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
HLA-DRB1-201ENST00000360004 OXTP01178 125 aa11.69□□□□□ -0.54
HLA-DRB1-201ENST00000360004 COX8AP10176 69 aa11.69□□□□□ -0.54
HLA-DRB1-201ENST00000360004 H0Y9J4 135 aa11.68□□□□□ -0.54
HLA-DRB1-201ENST00000360004 CBY1Q9Y3M2 126 aa11.68□□□□□ -0.54
HLA-DRB1-201ENST00000360004 ETDCA0A1B0GVM5 59 aa11.67□□□□□ -0.54
HLA-DRB1-201ENST00000360004 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
HLA-DRB1-201ENST00000360004 LINC00518Q8N0U6 118 aa11.67□□□□□ -0.54
HLA-DRB1-201ENST00000360004 C14orf144Q96I85 54 aa11.67□□□□□ -0.54
HLA-DRB1-201ENST00000360004 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
HLA-DRB1-201ENST00000360004 PRLHP81277 87 aa11.66□□□□□ -0.54
HLA-DRB1-201ENST00000360004 PYY3Q5JQD4 70 aa11.66□□□□□ -0.54
HLA-DRB1-201ENST00000360004 SLC25A34Q6PIV7 304 aa11.65□□□□□ -0.54
HLA-DRB1-201ENST00000360004 KCNQ1DNQ9H478 68 aa11.65□□□□□ -0.54
HLA-DRB1-201ENST00000360004 TRAV23DV6A0A075B6W5 121 aa11.64□□□□□ -0.55
HLA-DRB1-201ENST00000360004 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
HLA-DRB1-201ENST00000360004 DLEU1O43261 78 aa11.63□□□□□ -0.55
HLA-DRB1-201ENST00000360004 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
HLA-DRB1-201ENST00000360004 HIGD2AQ9BW72 106 aa11.62□□□□□ -0.55
HLA-DRB1-201ENST00000360004 A6NDN8 102 aa11.61□□□□□ -0.55
HLA-DRB1-201ENST00000360004 HINT1P49773 126 aaPredicted RBP11.61□□□□□ -0.55
HLA-DRB1-201ENST00000360004 LINC00337Q8N6G1 96 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms