RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 KRTAP4-5Q9BYR2 181 aa7.91□□□□□ -1.14
NIF3L1-201ENST00000359683 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
NIF3L1-201ENST00000359683 HSPG2P98160 4391 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 PANO1I0J062 215 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 DLEU1O43261 78 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 TIMM17BO60830 172 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 S100A12P80511 92 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 GAGE2EQ4V326 116 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 LINC00474Q9P2X8 69 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 GAGE2DQ9UEU5 116 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.14
NIF3L1-201ENST00000359683 ABCA13Q86UQ4 5058 aa7.9□□□□□ -1.15
NIF3L1-201ENST00000359683 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
NIF3L1-201ENST00000359683 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
NIF3L1-201ENST00000359683 C14orf144Q96I85 54 aa7.89□□□□□ -1.15
NIF3L1-201ENST00000359683 LITAFQ99732 161 aa7.89□□□□□ -1.15
NIF3L1-201ENST00000359683 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
NIF3L1-201ENST00000359683 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
NIF3L1-201ENST00000359683 C9orf129Q5T035 196 aaKnown RBP7.88□□□□□ -1.15
NIF3L1-201ENST00000359683 SCGB1D4Q6XE38 83 aa7.88□□□□□ -1.15
NIF3L1-201ENST00000359683 MIR7-3HGQ8N6C7 128 aa7.88□□□□□ -1.15
NIF3L1-201ENST00000359683 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
NIF3L1-201ENST00000359683 XAGE1AQ9HD64 81 aa7.88□□□□□ -1.15
NIF3L1-201ENST00000359683 SLC25A34Q6PIV7 304 aa7.86□□□□□ -1.15
NIF3L1-201ENST00000359683 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
NIF3L1-201ENST00000359683 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 EPM2AB3EWF7 344 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 DAND5Q8N907 189 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 DPH3Q96FX2 82 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 C12orf57Q99622 126 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 A0A087WYN8 130 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 TMEM238C9JI98 176 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 SPANXDQ9BXN6 97 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 SPANXCQ9NY87 97 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 PLAC8Q9NZF1 115 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
NIF3L1-201ENST00000359683 Q6ZVH6 145 aa7.84□□□□□ -1.15
NIF3L1-201ENST00000359683 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
NIF3L1-201ENST00000359683 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
NIF3L1-201ENST00000359683 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
NIF3L1-201ENST00000359683 XGP55808 180 aa7.83□□□□□ -1.16
NIF3L1-201ENST00000359683 SPANXB1Q9NS25 103 aaPredicted RBP7.83□□□□□ -1.16
NIF3L1-201ENST00000359683 HIGD1BQ9P298 99 aa7.83□□□□□ -1.16
NIF3L1-201ENST00000359683 SOSTDC1Q6X4U4 206 aa7.82□□□□□ -1.16
NIF3L1-201ENST00000359683 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
NIF3L1-201ENST00000359683 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
NIF3L1-201ENST00000359683 APOBP04114 4563 aaKnown RBP7.82□□□□□ -1.16
NIF3L1-201ENST00000359683 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 C2orf91Q6ZV80 131 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 UQCR10Q9UDW1 63 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 VPREB1P12018 145 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 IFITM1P13164 125 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 Q8NDZ9 215 aa7.81□□□□□ -1.16
NIF3L1-201ENST00000359683 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 NPC2P61916 151 aa7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 RPL24P83731 157 aaKnown RBP7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 SRSF9Q13242 221 aaKnown RBP eCLIP7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 FAM19A5Q7Z5A7 132 aaPredicted RBP7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 PRO1933Q9H354 126 aa7.8□□□□□ -1.16
NIF3L1-201ENST00000359683 HAMPP81172 84 aa7.79□□□□□ -1.16
NIF3L1-201ENST00000359683 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
NIF3L1-201ENST00000359683 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
NIF3L1-201ENST00000359683 NDUFC2O95298 119 aa7.78□□□□□ -1.16
NIF3L1-201ENST00000359683 Q8N1X5 172 aa7.78□□□□□ -1.16
NIF3L1-201ENST00000359683 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
NIF3L1-201ENST00000359683 PCP4L1A6NKN8 68 aa7.78□□□□□ -1.16
NIF3L1-201ENST00000359683 M0QXV9 152 aa7.77□□□□□ -1.17
NIF3L1-201ENST00000359683 HIST1H4GQ99525 98 aa7.77□□□□□ -1.17
NIF3L1-201ENST00000359683 PRR3P79522 188 aaKnown RBP7.76□□□□□ -1.17
NIF3L1-201ENST00000359683 TAL2Q16559 108 aa7.76□□□□□ -1.17
NIF3L1-201ENST00000359683 PHF5AQ7RTV0 110 aaKnown RBP7.76□□□□□ -1.17
NIF3L1-201ENST00000359683 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
NIF3L1-201ENST00000359683 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
NIF3L1-201ENST00000359683 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
NIF3L1-201ENST00000359683 TRBV10-2A0A0K0K1G8 114 aa7.74□□□□□ -1.17
NIF3L1-201ENST00000359683 M0R378 163 aa7.74□□□□□ -1.17
NIF3L1-201ENST00000359683 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
NIF3L1-201ENST00000359683 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
NIF3L1-201ENST00000359683 TSTD3H0UI37 97 aa7.74□□□□□ -1.17
NIF3L1-201ENST00000359683 HNRNPA3P51991 378 aaKnown RBP7.74□□□□□ -1.17
NIF3L1-201ENST00000359683 IGKV2-28A0A075B6P5 120 aa7.73□□□□□ -1.17
NIF3L1-201ENST00000359683 NCR3O14931 201 aa7.73□□□□□ -1.17
NIF3L1-201ENST00000359683 IGKV2D-28P01615 120 aa7.73□□□□□ -1.17
NIF3L1-201ENST00000359683 CEND1Q8N111 149 aa7.73□□□□□ -1.17
NIF3L1-201ENST00000359683 A4D1N5 150 aa7.72□□□□□ -1.17
NIF3L1-201ENST00000359683 HSD52Q0P140 79 aa7.72□□□□□ -1.17
NIF3L1-201ENST00000359683 GAGE10A6NGK3 116 aa7.71□□□□□ -1.17
NIF3L1-201ENST00000359683 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.17
NIF3L1-201ENST00000359683 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.17
NIF3L1-201ENST00000359683 IGLV1-50A0A075B6I6 118 aa7.7□□□□□ -1.18
NIF3L1-201ENST00000359683 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms