RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 LINC01546A6NGU7 62 aa10.72□□□□□ -0.69
PDE3A-201ENST00000359062 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
PDE3A-201ENST00000359062 KIF25-AS1Q9Y6Z4 181 aa10.72□□□□□ -0.69
PDE3A-201ENST00000359062 GOLGB1Q14789 3259 aaKnown RBP10.71□□□□□ -0.69
PDE3A-201ENST00000359062 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
PDE3A-201ENST00000359062 RPL37AP61513 92 aaKnown RBP10.7□□□□□ -0.7
PDE3A-201ENST00000359062 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
PDE3A-201ENST00000359062 LINC00476Q8WZB0 136 aa10.68□□□□□ -0.7
PDE3A-201ENST00000359062 NAV2Q8IVL1 2488 aa10.68□□□□□ -0.7
PDE3A-201ENST00000359062 ELOF1P60002 83 aaKnown RBP10.67□□□□□ -0.7
PDE3A-201ENST00000359062 TYMSOSQ8TAI1 123 aa10.67□□□□□ -0.7
PDE3A-201ENST00000359062 PRO0628Q9UI54 55 aa10.67□□□□□ -0.7
PDE3A-201ENST00000359062 SPINT4Q6UDR6 99 aa10.66□□□□□ -0.7
PDE3A-201ENST00000359062 FN1P02751 2386 aaKnown RBP10.66□□□□□ -0.7
PDE3A-201ENST00000359062 Q6ZQT0 140 aa10.65□□□□□ -0.7
PDE3A-201ENST00000359062 ATP11AUNQ6ZP68 121 aa10.65□□□□□ -0.7
PDE3A-201ENST00000359062 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
PDE3A-201ENST00000359062 ZFYVE26Q68DK2 2539 aa10.64□□□□□ -0.71
PDE3A-201ENST00000359062 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
PDE3A-201ENST00000359062 EPM2AB3EWF7 344 aa10.64□□□□□ -0.71
PDE3A-201ENST00000359062 RTL8CO15255 209 aa10.64□□□□□ -0.71
PDE3A-201ENST00000359062 COL4A2P08572 1712 aa10.64□□□□□ -0.71
PDE3A-201ENST00000359062 ST20-AS1Q8NBB2 130 aa10.63□□□□□ -0.71
PDE3A-201ENST00000359062 Q96NJ1 140 aa10.63□□□□□ -0.71
PDE3A-201ENST00000359062 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
PDE3A-201ENST00000359062 TM2D3Q9BRN9 247 aa10.61□□□□□ -0.71
PDE3A-201ENST00000359062 LINC00315P59091 139 aa10.61□□□□□ -0.71
PDE3A-201ENST00000359062 Q6ZRX8 168 aa10.61□□□□□ -0.71
PDE3A-201ENST00000359062 CENPFP49454 3210 aa10.61□□□□□ -0.71
PDE3A-201ENST00000359062 IGF2RP11717 2491 aa10.6□□□□□ -0.71
PDE3A-201ENST00000359062 TRAV22A0A0B4J277 110 aa10.6□□□□□ -0.71
PDE3A-201ENST00000359062 Q8NBF4 154 aa10.59□□□□□ -0.71
PDE3A-201ENST00000359062 MYO9AB2RTY4 2548 aa10.59□□□□□ -0.71
PDE3A-201ENST00000359062 C16orf90A8MZG2 172 aa10.58□□□□□ -0.72
PDE3A-201ENST00000359062 LOC110117498A0A087WWA1 95 aa10.58□□□□□ -0.72
PDE3A-201ENST00000359062 C8orf87E5RJ46 101 aa10.57□□□□□ -0.72
PDE3A-201ENST00000359062 IGLV5-45A0A087WSX0 123 aa10.56□□□□□ -0.72
PDE3A-201ENST00000359062 Q6ZRP5 223 aa10.56□□□□□ -0.72
PDE3A-201ENST00000359062 FAM168BA1KXE4 195 aa10.56□□□□□ -0.72
PDE3A-201ENST00000359062 C10orf142B7Z368 130 aa10.55□□□□□ -0.72
PDE3A-201ENST00000359062 H3BPC8 53 aa10.53□□□□□ -0.72
PDE3A-201ENST00000359062 BCE1O60756 84 aa10.53□□□□□ -0.72
PDE3A-201ENST00000359062 A0A1B0GW54 56 aa10.53□□□□□ -0.72
PDE3A-201ENST00000359062 H3BNG1 76 aa10.52□□□□□ -0.72
PDE3A-201ENST00000359062 SSBP3-AS1Q7Z2R9 100 aa10.52□□□□□ -0.72
PDE3A-201ENST00000359062 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.72
PDE3A-201ENST00000359062 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
PDE3A-201ENST00000359062 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
PDE3A-201ENST00000359062 ANKRD17O75179 2603 aaKnown RBP10.5□□□□□ -0.73
PDE3A-201ENST00000359062 TRBV7-4A0A0J9YYF1 115 aa10.49□□□□□ -0.73
PDE3A-201ENST00000359062 ABCA12Q86UK0 2595 aa10.49□□□□□ -0.73
PDE3A-201ENST00000359062 RPS28P62857 69 aaKnown RBP10.49□□□□□ -0.73
PDE3A-201ENST00000359062 K7EQZ3 153 aa10.48□□□□□ -0.73
PDE3A-201ENST00000359062 TLN2Q9Y4G6 2542 aa10.47□□□□□ -0.73
PDE3A-201ENST00000359062 GVQW2A0A096LPI5 108 aaPredicted RBP10.47□□□□□ -0.73
PDE3A-201ENST00000359062 A8MWP4 228 aa10.46□□□□□ -0.73
PDE3A-201ENST00000359062 Q8NAQ8 132 aa10.46□□□□□ -0.73
PDE3A-201ENST00000359062 COA5Q86WW8 74 aa10.45□□□□□ -0.74
PDE3A-201ENST00000359062 TLN1Q9Y490 2541 aaKnown RBP10.44□□□□□ -0.74
PDE3A-201ENST00000359062 APLNQ9ULZ1 77 aa10.44□□□□□ -0.74
PDE3A-201ENST00000359062 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
PDE3A-201ENST00000359062 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
PDE3A-201ENST00000359062 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
PDE3A-201ENST00000359062 KRTAP24-1Q3LI83 254 aa10.42□□□□□ -0.74
PDE3A-201ENST00000359062 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
PDE3A-201ENST00000359062 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
PDE3A-201ENST00000359062 J3QL48 77 aa10.4□□□□□ -0.75
PDE3A-201ENST00000359062 DSCR10P59022 87 aa10.4□□□□□ -0.75
PDE3A-201ENST00000359062 C9orf92A6NGG3 77 aa10.38□□□□□ -0.75
PDE3A-201ENST00000359062 VPREB1P12018 145 aa10.38□□□□□ -0.75
PDE3A-201ENST00000359062 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
PDE3A-201ENST00000359062 A8MUN3 132 aa10.37□□□□□ -0.75
PDE3A-201ENST00000359062 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
PDE3A-201ENST00000359062 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
PDE3A-201ENST00000359062 LITAFQ99732 161 aa10.35□□□□□ -0.75
PDE3A-201ENST00000359062 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
PDE3A-201ENST00000359062 UQCR11O14957 56 aa10.34□□□□□ -0.75
PDE3A-201ENST00000359062 IGLV1-50A0A075B6I6 118 aa10.33□□□□□ -0.76
PDE3A-201ENST00000359062 CRIPTQ9P021 101 aa10.33□□□□□ -0.76
PDE3A-201ENST00000359062 IGFL1Q6UW32 110 aa10.32□□□□□ -0.76
PDE3A-201ENST00000359062 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
PDE3A-201ENST00000359062 DNAH12Q6ZR08 3092 aa10.31□□□□□ -0.76
PDE3A-201ENST00000359062 MIR22HGQ0VDD5 57 aa10.31□□□□□ -0.76
PDE3A-201ENST00000359062 CYP4F30PQ9H0H9 118 aa10.28□□□□□ -0.76
PDE3A-201ENST00000359062 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
PDE3A-201ENST00000359062 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
PDE3A-201ENST00000359062 ERC2-IT1O76042 136 aa10.28□□□□□ -0.76
PDE3A-201ENST00000359062 WWC2-AS2Q96NR7 200 aa10.28□□□□□ -0.76
PDE3A-201ENST00000359062 KCNQ1DNQ9H478 68 aa10.27□□□□□ -0.76
PDE3A-201ENST00000359062 LINC00304Q8N9R0 145 aa10.27□□□□□ -0.77
PDE3A-201ENST00000359062 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
PDE3A-201ENST00000359062 USP9XQ93008 2570 aaPredicted RBP10.25□□□□□ -0.77
PDE3A-201ENST00000359062 CR1P17927 2039 aa10.25□□□□□ -0.77
PDE3A-201ENST00000359062 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
PDE3A-201ENST00000359062 ACANP16112 2415 aa10.24□□□□□ -0.77
PDE3A-201ENST00000359062 KRTAP10-11P60412 298 aa10.24□□□□□ -0.77
PDE3A-201ENST00000359062 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
PDE3A-201ENST00000359062 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
PDE3A-201ENST00000359062 ANKRD11Q6UB99 2663 aaPredicted RBP10.23□□□□□ -0.77
PDE3A-201ENST00000359062 ANAPC11Q9NYG5 84 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms