RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 Q6ZTC4 211 aa14.4□□□□□ -0.1
CCDC38-201ENST00000344280 ORMDL1Q9P0S3 153 aa14.4□□□□□ -0.1
CCDC38-201ENST00000344280 A0A0J9YWU9 116 aa14.39□□□□□ -0.11
CCDC38-201ENST00000344280 KPRPQ5T749 579 aaPredicted RBP14.39□□□□□ -0.11
CCDC38-201ENST00000344280 LINC00643Q86TS7 51 aa14.39□□□□□ -0.11
CCDC38-201ENST00000344280 Q8N814 137 aa14.39□□□□□ -0.11
CCDC38-201ENST00000344280 C6orf99Q4VX62 202 aa14.38□□□□□ -0.11
CCDC38-201ENST00000344280 LINC00167Q96N53 147 aa14.37□□□□□ -0.11
CCDC38-201ENST00000344280 S100A7L2Q5SY68 101 aa14.36□□□□□ -0.11
CCDC38-201ENST00000344280 C6orf48Q9UBA6 75 aa14.36□□□□□ -0.11
CCDC38-201ENST00000344280 CCDC179H3BU77 68 aa14.35□□□□□ -0.11
CCDC38-201ENST00000344280 KRTAP24-1Q3LI83 254 aa14.35□□□□□ -0.11
CCDC38-201ENST00000344280 RPL18AQ02543 176 aaKnown RBP14.33□□□□□ -0.12
CCDC38-201ENST00000344280 XAGE1AQ9HD64 81 aa14.32□□□□□ -0.12
CCDC38-201ENST00000344280 MAST4O15021 2626 aa14.32□□□□□ -0.12
CCDC38-201ENST00000344280 HIGD2BQ4VC39 106 aa14.32□□□□□ -0.12
CCDC38-201ENST00000344280 NOTCH1P46531 2555 aa14.32□□□□□ -0.12
CCDC38-201ENST00000344280 FAM236AA0A1B0GUQ0 79 aa14.31□□□□□ -0.12
CCDC38-201ENST00000344280 FAM236BA0A1B0GV22 79 aa14.31□□□□□ -0.12
CCDC38-201ENST00000344280 IMUPQ9GZP8 106 aa14.31□□□□□ -0.12
CCDC38-201ENST00000344280 LINC00846Q9NV44 126 aa14.31□□□□□ -0.12
CCDC38-201ENST00000344280 A0A1B0GX51 115 aa14.31□□□□□ -0.12
CCDC38-201ENST00000344280 ESRGQ1W209 222 aa14.3□□□□□ -0.12
CCDC38-201ENST00000344280 KRTAP26-1Q6PEX3 210 aa14.3□□□□□ -0.12
CCDC38-201ENST00000344280 GVQW2A0A096LPI5 108 aaPredicted RBP14.3□□□□□ -0.12
CCDC38-201ENST00000344280 H3BNG1 76 aa14.3□□□□□ -0.12
CCDC38-201ENST00000344280 EGFEM1PQ0D2K5 195 aa14.3□□□□□ -0.12
CCDC38-201ENST00000344280 SMIM20Q8N5G0 67 aa14.29□□□□□ -0.12
CCDC38-201ENST00000344280 IGLV6-57P01721 117 aa14.29□□□□□ -0.12
CCDC38-201ENST00000344280 LINC00575Q6W349 94 aa14.28□□□□□ -0.12
CCDC38-201ENST00000344280 MUC7Q8TAX7 377 aa14.27□□□□□ -0.12
CCDC38-201ENST00000344280 DNAH3Q8TD57 4116 aa14.26□□□□□ -0.13
CCDC38-201ENST00000344280 TMEM256-PLSCR3K7ERE1 68 aa14.26□□□□□ -0.13
CCDC38-201ENST00000344280 TRBV10-3A0A0K0K1G6 114 aa14.25□□□□□ -0.13
CCDC38-201ENST00000344280 ZNF561-AS1K7EIQ3 104 aa14.25□□□□□ -0.13
CCDC38-201ENST00000344280 C3orf56Q8N813 242 aa14.24□□□□□ -0.13
CCDC38-201ENST00000344280 C15orf56Q8N910 161 aa14.24□□□□□ -0.13
CCDC38-201ENST00000344280 CAMK2N2Q96S95 79 aa14.24□□□□□ -0.13
CCDC38-201ENST00000344280 CCKP06307 115 aa14.22□□□□□ -0.13
CCDC38-201ENST00000344280 IGKV3D-7A0A0C4DH55 119 aa14.22□□□□□ -0.13
CCDC38-201ENST00000344280 Q6ZRU5 148 aa14.22□□□□□ -0.13
CCDC38-201ENST00000344280 DEFB131BA0A096LNP1 70 aa14.21□□□□□ -0.13
CCDC38-201ENST00000344280 hADV29S1A0JD25 119 aa14.21□□□□□ -0.13
CCDC38-201ENST00000344280 JMJD7-PLA2G4BH0Y9G9 81 aa14.21□□□□□ -0.14
CCDC38-201ENST00000344280 C11orf45Q8TAV5 145 aa14.19□□□□□ -0.14
CCDC38-201ENST00000344280 TRAV23DV6A0A075B6W5 121 aa14.18□□□□□ -0.14
CCDC38-201ENST00000344280 COL6A5A8TX70 2615 aa14.17□□□□□ -0.14
CCDC38-201ENST00000344280 NBEAL1Q6ZS30 2694 aa14.16□□□□□ -0.14
CCDC38-201ENST00000344280 VPREB1P12018 145 aa14.16□□□□□ -0.14
CCDC38-201ENST00000344280 IGKV2D-24A0A075B6R9 120 aa14.15□□□□□ -0.14
CCDC38-201ENST00000344280 Q6JHZ5 121 aa14.15□□□□□ -0.14
CCDC38-201ENST00000344280 Q6ZQY7 126 aa14.15□□□□□ -0.14
CCDC38-201ENST00000344280 C1orf43Q9BWL3 253 aa14.15□□□□□ -0.14
CCDC38-201ENST00000344280 PRB2P02812 416 aaPredicted RBP14.15□□□□□ -0.14
CCDC38-201ENST00000344280 LINC01556Q5JQF7 62 aa14.15□□□□□ -0.14
CCDC38-201ENST00000344280 ZNF73O43830 326 aaPredicted RBP14.13□□□□□ -0.15
CCDC38-201ENST00000344280 DIRC1Q969H9 104 aa14.13□□□□□ -0.15
CCDC38-201ENST00000344280 A0A087WVE0 104 aa14.12□□□□□ -0.15
CCDC38-201ENST00000344280 NDUFC2-KCTD14E9PQ53 114 aa14.12□□□□□ -0.15
CCDC38-201ENST00000344280 Q6ZRP5 223 aa14.12□□□□□ -0.15
CCDC38-201ENST00000344280 HIST1H4AP62805 103 aaKnown RBP14.11□□□□□ -0.15
CCDC38-201ENST00000344280 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
CCDC38-201ENST00000344280 LAMTOR3Q9UHA4 124 aa14.11□□□□□ -0.15
CCDC38-201ENST00000344280 RBM3P98179 157 aaKnown RBP14.1□□□□□ -0.15
CCDC38-201ENST00000344280 BAHCC1Q9P281 2608 aa14.09□□□□□ -0.15
CCDC38-201ENST00000344280 M0R2N4 97 aa14.09□□□□□ -0.15
CCDC38-201ENST00000344280 Q6ZQT0 140 aa14.08□□□□□ -0.16
CCDC38-201ENST00000344280 COX7BP24311 80 aa14.07□□□□□ -0.16
CCDC38-201ENST00000344280 ELOF1P60002 83 aaKnown RBP14.07□□□□□ -0.16
CCDC38-201ENST00000344280 M0R378 163 aa14.06□□□□□ -0.16
CCDC38-201ENST00000344280 DNAH10OSP0CZ25 163 aa14.05□□□□□ -0.16
CCDC38-201ENST00000344280 SYCNQ0VAF6 134 aa14.04□□□□□ -0.16
CCDC38-201ENST00000344280 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
CCDC38-201ENST00000344280 C3orf22Q8N5N4 141 aa14.03□□□□□ -0.16
CCDC38-201ENST00000344280 UQCRQO14949 82 aa14.03□□□□□ -0.16
CCDC38-201ENST00000344280 LINC00588Q9Y4M8 146 aa14.03□□□□□ -0.16
CCDC38-201ENST00000344280 LOC110117498A0A087WWA1 95 aa14.02□□□□□ -0.16
CCDC38-201ENST00000344280 CASC10Q5T4H9 136 aa14.01□□□□□ -0.17
CCDC38-201ENST00000344280 MRAPQ8TCY5 172 aa14.01□□□□□ -0.17
CCDC38-201ENST00000344280 DNAH1Q9P2D7 4330 aa14□□□□□ -0.17
CCDC38-201ENST00000344280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14□□□□□ -0.17
CCDC38-201ENST00000344280 SERTAD4-AS1Q5TG53 156 aa13.99□□□□□ -0.17
CCDC38-201ENST00000344280 DSCR8Q96T75 97 aa13.99□□□□□ -0.17
CCDC38-201ENST00000344280 TRBV7-6A0A0J9YX20 115 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 ATOX1O00244 68 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 C9orf153Q5TBE3 101 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 LINC00528Q8N1L1 170 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 TRAV10A0A0B4J240 114 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 FAM19A1Q7Z5A9 133 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 UBL5Q9BZL1 73 aa13.98□□□□□ -0.17
CCDC38-201ENST00000344280 LYSTQ99698 3801 aa13.97□□□□□ -0.17
CCDC38-201ENST00000344280 MGAM2Q2M2H8 2515 aa13.96□□□□□ -0.17
CCDC38-201ENST00000344280 COX7CP15954 63 aa13.96□□□□□ -0.17
CCDC38-201ENST00000344280 USP17L23D6RBM5 183 aa13.95□□□□□ -0.18
CCDC38-201ENST00000344280 K7EIL1 84 aa13.94□□□□□ -0.18
CCDC38-201ENST00000344280 TM2D3Q9BRN9 247 aa13.94□□□□□ -0.18
CCDC38-201ENST00000344280 F8WDY8 70 aa13.93□□□□□ -0.18
CCDC38-201ENST00000344280 ATP5EP2Q5VTU8 51 aa13.93□□□□□ -0.18
CCDC38-201ENST00000344280 H3BQ85 93 aa13.92□□□□□ -0.18
CCDC38-201ENST00000344280 C7orf33Q8WU49 177 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms