RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TMEM170BQ5T4T1 132 aa8.18□□□□□ -1.1
HLA-DQA1-201ENST00000343139 BATFQ16520 125 aa8.18□□□□□ -1.1
HLA-DQA1-201ENST00000343139 C2orf91Q6ZV80 131 aa8.18□□□□□ -1.1
HLA-DQA1-201ENST00000343139 NMUP48645 174 aa8.17□□□□□ -1.1
HLA-DQA1-201ENST00000343139 GAGE2EQ4V326 116 aa8.17□□□□□ -1.1
HLA-DQA1-201ENST00000343139 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
HLA-DQA1-201ENST00000343139 GAGE2DQ9UEU5 116 aa8.17□□□□□ -1.1
HLA-DQA1-201ENST00000343139 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
HLA-DQA1-201ENST00000343139 TMEM223A0PJW6 202 aa8.16□□□□□ -1.1
HLA-DQA1-201ENST00000343139 HINT1P49773 126 aaPredicted RBP8.16□□□□□ -1.1
HLA-DQA1-201ENST00000343139 HSD52Q0P140 79 aa8.15□□□□□ -1.1
HLA-DQA1-201ENST00000343139 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
HLA-DQA1-201ENST00000343139 BVES-AS1Q5T3Y7 98 aa8.15□□□□□ -1.1
HLA-DQA1-201ENST00000343139 E9PLD3 99 aa8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 HERVK_113P61574 105 aa8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 PRR3P79522 188 aaKnown RBP8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 COX17Q14061 63 aa8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 PCP2Q8IVA1 136 aa8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 ZNF625Q96I27 306 aaPredicted RBP8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
HLA-DQA1-201ENST00000343139 IGKV2D-26A0A0A0MRZ7 120 aa8.13□□□□□ -1.11
HLA-DQA1-201ENST00000343139 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
HLA-DQA1-201ENST00000343139 KRTAP7-1Q8IUC3 87 aa8.13□□□□□ -1.11
HLA-DQA1-201ENST00000343139 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
HLA-DQA1-201ENST00000343139 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
HLA-DQA1-201ENST00000343139 TAL2Q16559 108 aa8.11□□□□□ -1.11
HLA-DQA1-201ENST00000343139 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
HLA-DQA1-201ENST00000343139 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 M0QXV9 152 aa8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 OXTP01178 125 aa8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 XAGE1AQ9HD64 81 aa8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 ERG28Q9UKR5 140 aa8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 A6NDN8 102 aa8.1□□□□□ -1.11
HLA-DQA1-201ENST00000343139 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
HLA-DQA1-201ENST00000343139 HERV-K104P63124 156 aa8.09□□□□□ -1.11
HLA-DQA1-201ENST00000343139 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
HLA-DQA1-201ENST00000343139 IGLV5-37A0A075B6J1 123 aa8.08□□□□□ -1.12
HLA-DQA1-201ENST00000343139 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
HLA-DQA1-201ENST00000343139 LEPROTO15243 131 aa8.07□□□□□ -1.12
HLA-DQA1-201ENST00000343139 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
HLA-DQA1-201ENST00000343139 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
HLA-DQA1-201ENST00000343139 PLEKHB2Q96CS7 222 aa8.07□□□□□ -1.12
HLA-DQA1-201ENST00000343139 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
HLA-DQA1-201ENST00000343139 PFN2P35080 140 aa8.06□□□□□ -1.12
HLA-DQA1-201ENST00000343139 TAX1BP3O14907 124 aa8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 TTTY13Q9BZ97 58 aa8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 NDUFA12Q9UI09 145 aa8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 UBE2BP63146 152 aa8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
HLA-DQA1-201ENST00000343139 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
HLA-DQA1-201ENST00000343139 J3QQQ9 107 aa8.04□□□□□ -1.12
HLA-DQA1-201ENST00000343139 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
HLA-DQA1-201ENST00000343139 CEND1Q8N111 149 aa8.04□□□□□ -1.12
HLA-DQA1-201ENST00000343139 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
HLA-DQA1-201ENST00000343139 RPL24P83731 157 aaKnown RBP8.03□□□□□ -1.12
HLA-DQA1-201ENST00000343139 KRTAP11-1Q8IUC1 163 aa8.03□□□□□ -1.12
HLA-DQA1-201ENST00000343139 IGLV7-43P04211 117 aa8.02□□□□□ -1.13
HLA-DQA1-201ENST00000343139 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.13
HLA-DQA1-201ENST00000343139 LINC00158P58513 81 aa8.02□□□□□ -1.13
HLA-DQA1-201ENST00000343139 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
HLA-DQA1-201ENST00000343139 J3QL48 77 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 SCGB1D4Q6XE38 83 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 VPREB1P12018 145 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
HLA-DQA1-201ENST00000343139 HERC1Q15751 4861 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 C9orf118A6NHY6 69 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 A6NJY4 79 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 SMIM13P0DJ93 91 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 FXYD2P54710 66 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 REG3GQ6UW15 175 aa8□□□□□ -1.13
HLA-DQA1-201ENST00000343139 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
HLA-DQA1-201ENST00000343139 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
HLA-DQA1-201ENST00000343139 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
HLA-DQA1-201ENST00000343139 UBE2V1Q13404 147 aa7.98□□□□□ -1.13
HLA-DQA1-201ENST00000343139 MIR7-3HGQ8N6C7 128 aa7.98□□□□□ -1.13
HLA-DQA1-201ENST00000343139 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
HLA-DQA1-201ENST00000343139 LINC01600Q96MT4 127 aa7.98□□□□□ -1.13
HLA-DQA1-201ENST00000343139 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
HLA-DQA1-201ENST00000343139 VAMP3Q15836 100 aa7.97□□□□□ -1.13
HLA-DQA1-201ENST00000343139 A0A0U1RRA0 63 aa7.97□□□□□ -1.13
HLA-DQA1-201ENST00000343139 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 ZNF861PO60384 105 aa7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 BCE1O60756 84 aa7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 Q6ZVH6 145 aa7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 Q8NDZ9 215 aa7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.14
HLA-DQA1-201ENST00000343139 H0Y9J4 135 aa7.95□□□□□ -1.14
HLA-DQA1-201ENST00000343139 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
HLA-DQA1-201ENST00000343139 A0A0J9YXY3 114 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms