RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 DAND5Q8N907 189 aa9.57□□□□□ -0.88
CSRP1-201ENST00000340006 SPANXDQ9BXN6 97 aa9.57□□□□□ -0.88
CSRP1-201ENST00000340006 SPANXCQ9NY87 97 aa9.57□□□□□ -0.88
CSRP1-201ENST00000340006 HECTD4Q9Y4D8 3996 aa9.57□□□□□ -0.88
CSRP1-201ENST00000340006 LINC00158P58513 81 aa9.55□□□□□ -0.88
CSRP1-201ENST00000340006 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
CSRP1-201ENST00000340006 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
CSRP1-201ENST00000340006 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
CSRP1-201ENST00000340006 GHRHP01286 108 aa9.54□□□□□ -0.88
CSRP1-201ENST00000340006 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
CSRP1-201ENST00000340006 A6NDN8 102 aa9.54□□□□□ -0.88
CSRP1-201ENST00000340006 NPC2P61916 151 aa9.54□□□□□ -0.88
CSRP1-201ENST00000340006 PKD1P98161 4303 aa9.53□□□□□ -0.88
CSRP1-201ENST00000340006 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
CSRP1-201ENST00000340006 COX17Q14061 63 aa9.53□□□□□ -0.88
CSRP1-201ENST00000340006 MIR7-3HGQ8N6C7 128 aa9.53□□□□□ -0.88
CSRP1-201ENST00000340006 LOC107984640A0A0U1RRK4 108 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 GAGE2EQ4V326 116 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 J3QR89 54 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 IFITM1P13164 125 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 GAGE2BQ13066 116 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 DPH3Q96FX2 82 aa9.52□□□□□ -0.89
CSRP1-201ENST00000340006 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
CSRP1-201ENST00000340006 RPL24P83731 157 aaKnown RBP9.51□□□□□ -0.89
CSRP1-201ENST00000340006 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
CSRP1-201ENST00000340006 Q6ZRP5 223 aa9.5□□□□□ -0.89
CSRP1-201ENST00000340006 NHP2Q9NX24 153 aaKnown RBP9.5□□□□□ -0.89
CSRP1-201ENST00000340006 A0A1B0GVY2 172 aa9.5□□□□□ -0.89
CSRP1-201ENST00000340006 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
CSRP1-201ENST00000340006 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
CSRP1-201ENST00000340006 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
CSRP1-201ENST00000340006 A4D1N5 150 aa9.49□□□□□ -0.89
CSRP1-201ENST00000340006 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
CSRP1-201ENST00000340006 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
CSRP1-201ENST00000340006 TLX1NBP0CAT3 122 aa9.48□□□□□ -0.89
CSRP1-201ENST00000340006 DNAH11Q96DT5 4516 aa9.48□□□□□ -0.89
CSRP1-201ENST00000340006 K7ERJ3 54 aa9.48□□□□□ -0.89
CSRP1-201ENST00000340006 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
CSRP1-201ENST00000340006 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
CSRP1-201ENST00000340006 A0A1B0GWB2 263 aa9.46□□□□□ -0.89
CSRP1-201ENST00000340006 A0A1W2PPM0 123 aa9.46□□□□□ -0.89
CSRP1-201ENST00000340006 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.89
CSRP1-201ENST00000340006 RAB37Q96AX2 223 aa9.46□□□□□ -0.89
CSRP1-201ENST00000340006 A0A096LNI7 61 aa9.46□□□□□ -0.9
CSRP1-201ENST00000340006 H3BUT2 72 aa9.46□□□□□ -0.9
CSRP1-201ENST00000340006 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
CSRP1-201ENST00000340006 CFC1P0CG37 223 aa9.46□□□□□ -0.9
CSRP1-201ENST00000340006 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.9
CSRP1-201ENST00000340006 SPCS1Q9Y6A9 102 aa9.46□□□□□ -0.9
CSRP1-201ENST00000340006 PPDPFQ9H3Y8 114 aa9.45□□□□□ -0.9
CSRP1-201ENST00000340006 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
CSRP1-201ENST00000340006 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
CSRP1-201ENST00000340006 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
CSRP1-201ENST00000340006 KRTAP10-1P60331 282 aa9.43□□□□□ -0.9
CSRP1-201ENST00000340006 A0A0B4J2C4 111 aa9.42□□□□□ -0.9
CSRP1-201ENST00000340006 LOC107984156A0A0G2JMH3 177 aa9.42□□□□□ -0.9
CSRP1-201ENST00000340006 F8W1H4 67 aa9.42□□□□□ -0.9
CSRP1-201ENST00000340006 FABP2P12104 132 aa9.42□□□□□ -0.9
CSRP1-201ENST00000340006 ARL17AQ8IVW1 177 aa9.42□□□□□ -0.9
CSRP1-201ENST00000340006 NAA38Q9BRA0 125 aaKnown RBP9.42□□□□□ -0.9
CSRP1-201ENST00000340006 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
CSRP1-201ENST00000340006 PKHD1P08F94 4074 aa9.41□□□□□ -0.9
CSRP1-201ENST00000340006 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.41□□□□□ -0.9
CSRP1-201ENST00000340006 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
CSRP1-201ENST00000340006 PANO1I0J062 215 aa9.4□□□□□ -0.9
CSRP1-201ENST00000340006 J3QL48 77 aa9.4□□□□□ -0.9
CSRP1-201ENST00000340006 PRO1854Q9UHT4 67 aa9.4□□□□□ -0.9
CSRP1-201ENST00000340006 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
CSRP1-201ENST00000340006 FAM168BA1KXE4 195 aa9.39□□□□□ -0.91
CSRP1-201ENST00000340006 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
CSRP1-201ENST00000340006 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
CSRP1-201ENST00000340006 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
CSRP1-201ENST00000340006 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
CSRP1-201ENST00000340006 NDUFC2O95298 119 aa9.37□□□□□ -0.91
CSRP1-201ENST00000340006 A0A087WYN8 130 aa9.36□□□□□ -0.91
CSRP1-201ENST00000340006 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
CSRP1-201ENST00000340006 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
CSRP1-201ENST00000340006 Q8NDZ9 215 aa9.36□□□□□ -0.91
CSRP1-201ENST00000340006 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
CSRP1-201ENST00000340006 H7C2G1 150 aa9.35□□□□□ -0.91
CSRP1-201ENST00000340006 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
CSRP1-201ENST00000340006 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
CSRP1-201ENST00000340006 TRAV13-2A0A0B4J235 113 aa9.34□□□□□ -0.91
CSRP1-201ENST00000340006 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
CSRP1-201ENST00000340006 SMIM20Q8N5G0 67 aa9.34□□□□□ -0.91
CSRP1-201ENST00000340006 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
CSRP1-201ENST00000340006 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
CSRP1-201ENST00000340006 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
CSRP1-201ENST00000340006 HAMPP81172 84 aa9.33□□□□□ -0.92
CSRP1-201ENST00000340006 Q1RN00 199 aa9.33□□□□□ -0.92
CSRP1-201ENST00000340006 Q6ZSA8 131 aa9.33□□□□□ -0.92
CSRP1-201ENST00000340006 ANAPC13Q9BS18 74 aa9.33□□□□□ -0.92
CSRP1-201ENST00000340006 B5MCH6 92 aa9.32□□□□□ -0.92
CSRP1-201ENST00000340006 NCR3O14931 201 aa9.32□□□□□ -0.92
CSRP1-201ENST00000340006 CIRBP-AS1Q8TBR5 109 aa9.32□□□□□ -0.92
CSRP1-201ENST00000340006 VPREB1P12018 145 aa9.32□□□□□ -0.92
CSRP1-201ENST00000340006 M0QXV9 152 aa9.31□□□□□ -0.92
CSRP1-201ENST00000340006 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms