RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SERTAD4-AS1Q5TG53 156 aa11.35□□□□□ -0.59
HLA-F-217ENST00000334668 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
HLA-F-217ENST00000334668 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
HLA-F-217ENST00000334668 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
HLA-F-217ENST00000334668 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
HLA-F-217ENST00000334668 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
HLA-F-217ENST00000334668 IGKCP01834 107 aa11.33□□□□□ -0.6
HLA-F-217ENST00000334668 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
HLA-F-217ENST00000334668 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
HLA-F-217ENST00000334668 PFN2P35080 140 aa11.32□□□□□ -0.6
HLA-F-217ENST00000334668 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
HLA-F-217ENST00000334668 LCE1DQ5T752 114 aa11.32□□□□□ -0.6
HLA-F-217ENST00000334668 C22orf24Q9Y442 160 aa11.32□□□□□ -0.6
HLA-F-217ENST00000334668 OXTP01178 125 aa11.31□□□□□ -0.6
HLA-F-217ENST00000334668 IGLV5-37A0A075B6J1 123 aa11.3□□□□□ -0.6
HLA-F-217ENST00000334668 LEPROTO15243 131 aa11.3□□□□□ -0.6
HLA-F-217ENST00000334668 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
HLA-F-217ENST00000334668 HERC1Q15751 4861 aa11.29□□□□□ -0.6
HLA-F-217ENST00000334668 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
HLA-F-217ENST00000334668 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
HLA-F-217ENST00000334668 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
HLA-F-217ENST00000334668 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
HLA-F-217ENST00000334668 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
HLA-F-217ENST00000334668 HERV-K104P63124 156 aa11.28□□□□□ -0.6
HLA-F-217ENST00000334668 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
HLA-F-217ENST00000334668 C3orf79P0CE67 100 aa11.27□□□□□ -0.61
HLA-F-217ENST00000334668 HERVK_113P61574 105 aa11.27□□□□□ -0.61
HLA-F-217ENST00000334668 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
HLA-F-217ENST00000334668 C1orf137Q5JT78 98 aa11.27□□□□□ -0.61
HLA-F-217ENST00000334668 MYMXA0A1B0GTQ4 84 aa11.26□□□□□ -0.61
HLA-F-217ENST00000334668 UBE2BP63146 152 aa11.26□□□□□ -0.61
HLA-F-217ENST00000334668 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
HLA-F-217ENST00000334668 J3QQQ9 107 aa11.25□□□□□ -0.61
HLA-F-217ENST00000334668 LINC00158P58513 81 aa11.24□□□□□ -0.61
HLA-F-217ENST00000334668 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 E9PLD3 99 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 VPREB1P12018 145 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 NMUP48645 174 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 LINC00167Q96N53 147 aa11.23□□□□□ -0.61
HLA-F-217ENST00000334668 H3BS24 57 aa11.22□□□□□ -0.61
HLA-F-217ENST00000334668 TNXBP22105 4242 aa11.21□□□□□ -0.61
HLA-F-217ENST00000334668 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
HLA-F-217ENST00000334668 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.61
HLA-F-217ENST00000334668 Q8NDZ9 215 aa11.21□□□□□ -0.61
HLA-F-217ENST00000334668 KRTAP4-7Q9BYR0 210 aa11.21□□□□□ -0.61
HLA-F-217ENST00000334668 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
HLA-F-217ENST00000334668 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
HLA-F-217ENST00000334668 KRTDAPP60985 99 aa11.2□□□□□ -0.62
HLA-F-217ENST00000334668 RPL24P83731 157 aaKnown RBP11.2□□□□□ -0.62
HLA-F-217ENST00000334668 MT1HL1P0DM35 61 aa11.19□□□□□ -0.62
HLA-F-217ENST00000334668 HIST3H2BBQ8N257 126 aa11.19□□□□□ -0.62
HLA-F-217ENST00000334668 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
HLA-F-217ENST00000334668 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
HLA-F-217ENST00000334668 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
HLA-F-217ENST00000334668 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
HLA-F-217ENST00000334668 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
HLA-F-217ENST00000334668 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
HLA-F-217ENST00000334668 REG3GQ6UW15 175 aa11.16□□□□□ -0.62
HLA-F-217ENST00000334668 DIRC1Q969H9 104 aa11.15□□□□□ -0.62
HLA-F-217ENST00000334668 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.62
HLA-F-217ENST00000334668 IGLV1-50A0A075B6I6 118 aa11.14□□□□□ -0.63
HLA-F-217ENST00000334668 C20orf202A1L168 122 aa11.14□□□□□ -0.63
HLA-F-217ENST00000334668 BCE1O60756 84 aa11.14□□□□□ -0.63
HLA-F-217ENST00000334668 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
HLA-F-217ENST00000334668 A0A0J9YXY3 114 aa11.13□□□□□ -0.63
HLA-F-217ENST00000334668 H0Y9J4 135 aa11.13□□□□□ -0.63
HLA-F-217ENST00000334668 ZNF861PO60384 105 aa11.13□□□□□ -0.63
HLA-F-217ENST00000334668 S100A6P06703 90 aa11.12□□□□□ -0.63
HLA-F-217ENST00000334668 AKR1D1P51857 326 aa11.12□□□□□ -0.63
HLA-F-217ENST00000334668 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
HLA-F-217ENST00000334668 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
HLA-F-217ENST00000334668 M0R378 163 aa11.11□□□□□ -0.63
HLA-F-217ENST00000334668 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
HLA-F-217ENST00000334668 S100A2P29034 98 aa11.11□□□□□ -0.63
HLA-F-217ENST00000334668 LCE4AQ5TA78 99 aa11.11□□□□□ -0.63
HLA-F-217ENST00000334668 DAND5Q8N907 189 aa11.11□□□□□ -0.63
HLA-F-217ENST00000334668 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
HLA-F-217ENST00000334668 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
HLA-F-217ENST00000334668 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
HLA-F-217ENST00000334668 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
HLA-F-217ENST00000334668 SNRPEP62304 92 aaKnown RBP11.08□□□□□ -0.64
HLA-F-217ENST00000334668 LITAFQ99732 161 aa11.08□□□□□ -0.64
HLA-F-217ENST00000334668 TIMM17BO60830 172 aa11.07□□□□□ -0.64
HLA-F-217ENST00000334668 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
HLA-F-217ENST00000334668 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
HLA-F-217ENST00000334668 ATOH7Q8N100 152 aa11.07□□□□□ -0.64
HLA-F-217ENST00000334668 TTTY13Q9BZ97 58 aa11.07□□□□□ -0.64
HLA-F-217ENST00000334668 TMEM126AQ9H061 195 aa11.07□□□□□ -0.64
HLA-F-217ENST00000334668 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
HLA-F-217ENST00000334668 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
HLA-F-217ENST00000334668 KRTAP1-4P0C5Y4 121 aa11.06□□□□□ -0.64
HLA-F-217ENST00000334668 KRTAP19-4Q3LI73 84 aa11.05□□□□□ -0.64
HLA-F-217ENST00000334668 SOSTDC1Q6X4U4 206 aa11.05□□□□□ -0.64
HLA-F-217ENST00000334668 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
HLA-F-217ENST00000334668 NCR3O14931 201 aa11.04□□□□□ -0.64
HLA-F-217ENST00000334668 NDUFC2O95298 119 aa11.04□□□□□ -0.64
HLA-F-217ENST00000334668 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
HLA-F-217ENST00000334668 KCNQ1DNQ9H478 68 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms