RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 KRTAP7-1Q8IUC3 87 aa12.83□□□□□ -0.36
MRPL40-201ENST00000333130 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
MRPL40-201ENST00000333130 ZNF815PA8K554 130 aa12.82□□□□□ -0.36
MRPL40-201ENST00000333130 PHF5AQ7RTV0 110 aaKnown RBP12.81□□□□□ -0.36
MRPL40-201ENST00000333130 PLA2G2DQ9UNK4 145 aa12.81□□□□□ -0.36
MRPL40-201ENST00000333130 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
MRPL40-201ENST00000333130 UBE2BP63146 152 aa12.8□□□□□ -0.36
MRPL40-201ENST00000333130 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
MRPL40-201ENST00000333130 PCP2Q8IVA1 136 aa12.8□□□□□ -0.36
MRPL40-201ENST00000333130 MIR7-3HGQ8N6C7 128 aa12.8□□□□□ -0.36
MRPL40-201ENST00000333130 LBHQ53QV2 105 aaPredicted RBP12.79□□□□□ -0.36
MRPL40-201ENST00000333130 SERTAD4-AS1Q5TG53 156 aa12.79□□□□□ -0.36
MRPL40-201ENST00000333130 NKAPP1Q8N9T2 125 aa12.79□□□□□ -0.36
MRPL40-201ENST00000333130 TIMM17BO60830 172 aa12.78□□□□□ -0.36
MRPL40-201ENST00000333130 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
MRPL40-201ENST00000333130 LITAFQ99732 161 aa12.78□□□□□ -0.36
MRPL40-201ENST00000333130 TP73-AS1Q9UF72 201 aa12.78□□□□□ -0.36
MRPL40-201ENST00000333130 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
MRPL40-201ENST00000333130 KRTAP10-4P60372 401 aaPredicted RBP12.76□□□□□ -0.37
MRPL40-201ENST00000333130 RPL24P83731 157 aaKnown RBP12.76□□□□□ -0.37
MRPL40-201ENST00000333130 C22orf24Q9Y442 160 aa12.76□□□□□ -0.37
MRPL40-201ENST00000333130 LOC107984156A0A0G2JMH3 177 aa12.75□□□□□ -0.37
MRPL40-201ENST00000333130 ADAMTSL4-AS1Q5T5F5 129 aa12.75□□□□□ -0.37
MRPL40-201ENST00000333130 MRPL55Q7Z7F7 128 aaKnown RBP12.75□□□□□ -0.37
MRPL40-201ENST00000333130 ARL17AQ8IVW1 177 aa12.75□□□□□ -0.37
MRPL40-201ENST00000333130 DAND5Q8N907 189 aa12.75□□□□□ -0.37
MRPL40-201ENST00000333130 ABCA13Q86UQ4 5058 aa12.75□□□□□ -0.37
MRPL40-201ENST00000333130 VAMP8Q9BV40 100 aa12.74□□□□□ -0.37
MRPL40-201ENST00000333130 VPREB1P12018 145 aa12.73□□□□□ -0.37
MRPL40-201ENST00000333130 Q8NDZ9 215 aa12.73□□□□□ -0.37
MRPL40-201ENST00000333130 SCGB1D4Q6XE38 83 aa12.72□□□□□ -0.37
MRPL40-201ENST00000333130 PSORS1C2Q9UIG4 136 aa12.72□□□□□ -0.37
MRPL40-201ENST00000333130 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
MRPL40-201ENST00000333130 FLG2Q5D862 2391 aaPredicted RBP12.71□□□□□ -0.37
MRPL40-201ENST00000333130 COX8AP10176 69 aa12.7□□□□□ -0.38
MRPL40-201ENST00000333130 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
MRPL40-201ENST00000333130 C1orf137Q5JT78 98 aa12.7□□□□□ -0.38
MRPL40-201ENST00000333130 BOD1L2Q8IYS8 172 aa12.7□□□□□ -0.38
MRPL40-201ENST00000333130 MIEN1Q9BRT3 115 aa12.7□□□□□ -0.38
MRPL40-201ENST00000333130 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
MRPL40-201ENST00000333130 PCLOQ9Y6V0 5065 aa12.69□□□□□ -0.38
MRPL40-201ENST00000333130 DLEU1O43261 78 aa12.69□□□□□ -0.38
MRPL40-201ENST00000333130 SOSTDC1Q6X4U4 206 aa12.69□□□□□ -0.38
MRPL40-201ENST00000333130 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
MRPL40-201ENST00000333130 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
MRPL40-201ENST00000333130 EIF4EBP3O60516 100 aaPredicted RBP12.67□□□□□ -0.38
MRPL40-201ENST00000333130 LINC00167Q96N53 147 aa12.67□□□□□ -0.38
MRPL40-201ENST00000333130 GAGE10A6NGK3 116 aa12.66□□□□□ -0.38
MRPL40-201ENST00000333130 KRTAP11-1Q8IUC1 163 aa12.66□□□□□ -0.38
MRPL40-201ENST00000333130 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
MRPL40-201ENST00000333130 Q6ZVH6 145 aa12.65□□□□□ -0.38
MRPL40-201ENST00000333130 LOC105371267A0A1B0GV96 52 aa12.64□□□□□ -0.39
MRPL40-201ENST00000333130 NDUFC2O95298 119 aa12.64□□□□□ -0.39
MRPL40-201ENST00000333130 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
MRPL40-201ENST00000333130 C14orf144Q96I85 54 aa12.64□□□□□ -0.39
MRPL40-201ENST00000333130 PPDPFQ9H3Y8 114 aa12.64□□□□□ -0.39
MRPL40-201ENST00000333130 RPL37AP8A6NKH3 93 aa12.63□□□□□ -0.39
MRPL40-201ENST00000333130 NPC2P61916 151 aa12.63□□□□□ -0.39
MRPL40-201ENST00000333130 SPINK6Q6UWN8 80 aa12.63□□□□□ -0.39
MRPL40-201ENST00000333130 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
MRPL40-201ENST00000333130 PKHD1L1Q86WI1 4243 aa12.63□□□□□ -0.39
MRPL40-201ENST00000333130 M0R378 163 aa12.61□□□□□ -0.39
MRPL40-201ENST00000333130 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
MRPL40-201ENST00000333130 IFITM1P13164 125 aa12.61□□□□□ -0.39
MRPL40-201ENST00000333130 IGKV2-28A0A075B6P5 120 aa12.6□□□□□ -0.39
MRPL40-201ENST00000333130 IGKV2D-28P01615 120 aa12.6□□□□□ -0.39
MRPL40-201ENST00000333130 SMIM6P0DI80 62 aa12.6□□□□□ -0.39
MRPL40-201ENST00000333130 SLC25A34Q6PIV7 304 aa12.6□□□□□ -0.39
MRPL40-201ENST00000333130 TRBV10-2A0A0K0K1G8 114 aa12.59□□□□□ -0.39
MRPL40-201ENST00000333130 NCR3O14931 201 aa12.59□□□□□ -0.39
MRPL40-201ENST00000333130 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
MRPL40-201ENST00000333130 IGLV1-50A0A075B6I6 118 aa12.58□□□□□ -0.4
MRPL40-201ENST00000333130 OXTP01178 125 aa12.57□□□□□ -0.4
MRPL40-201ENST00000333130 S100A12P80511 92 aa12.57□□□□□ -0.4
MRPL40-201ENST00000333130 REG3GQ6UW15 175 aa12.57□□□□□ -0.4
MRPL40-201ENST00000333130 MYCBP2O75592 4640 aa12.57□□□□□ -0.4
MRPL40-201ENST00000333130 BCE1O60756 84 aa12.56□□□□□ -0.4
MRPL40-201ENST00000333130 DIRC1Q969H9 104 aa12.56□□□□□ -0.4
MRPL40-201ENST00000333130 HIGD1BQ9P298 99 aa12.56□□□□□ -0.4
MRPL40-201ENST00000333130 SRSF9Q13242 221 aaKnown RBP eCLIP12.56□□□□□ -0.4
MRPL40-201ENST00000333130 C2orf91Q6ZV80 131 aa12.56□□□□□ -0.4
MRPL40-201ENST00000333130 MUSTN1Q8IVN3 82 aa12.56□□□□□ -0.4
MRPL40-201ENST00000333130 J3QL48 77 aa12.55□□□□□ -0.4
MRPL40-201ENST00000333130 RPL28P46779 137 aaKnown RBP12.55□□□□□ -0.4
MRPL40-201ENST00000333130 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
MRPL40-201ENST00000333130 KRTAP29-1A8MX34 341 aaPredicted RBP12.54□□□□□ -0.4
MRPL40-201ENST00000333130 UBE2AP49459 152 aa12.53□□□□□ -0.4
MRPL40-201ENST00000333130 TRBV10-3A0A0K0K1G6 114 aa12.52□□□□□ -0.41
MRPL40-201ENST00000333130 ZNF861PO60384 105 aa12.52□□□□□ -0.41
MRPL40-201ENST00000333130 IGLV6-57P01721 117 aa12.51□□□□□ -0.41
MRPL40-201ENST00000333130 TMEM126AQ9H061 195 aa12.51□□□□□ -0.41
MRPL40-201ENST00000333130 PRYO14603 147 aa12.5□□□□□ -0.41
MRPL40-201ENST00000333130 S100A7L2Q5SY68 101 aa12.5□□□□□ -0.41
MRPL40-201ENST00000333130 LINC00518Q8N0U6 118 aa12.5□□□□□ -0.41
MRPL40-201ENST00000333130 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
MRPL40-201ENST00000333130 H0Y9J4 135 aa12.49□□□□□ -0.41
MRPL40-201ENST00000333130 DDTP30046 118 aa12.49□□□□□ -0.41
MRPL40-201ENST00000333130 HIST1H4GQ99525 98 aa12.49□□□□□ -0.41
MRPL40-201ENST00000333130 FAM19A1Q7Z5A9 133 aa12.48□□□□□ -0.41
MRPL40-201ENST00000333130 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms