RNA–Protein interactions for RNA: ENST00000332598.6

TMED9-201, Transcript of transmembrane p24 trafficking protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED9, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-201ENST00000332598 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
TMED9-201ENST00000332598 PTTG1IPP53801 180 aa10.77□□□□□ -0.69
TMED9-201ENST00000332598 KRTAP10-4P60372 401 aaPredicted RBP10.77□□□□□ -0.69
TMED9-201ENST00000332598 CKS1BP61024 79 aa10.77□□□□□ -0.69
TMED9-201ENST00000332598 DNAH8Q96JB1 4490 aa10.76□□□□□ -0.69
TMED9-201ENST00000332598 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
TMED9-201ENST00000332598 ZNF561-AS1K7EIQ3 104 aa10.75□□□□□ -0.69
TMED9-201ENST00000332598 SPACA4Q8TDM5 124 aa10.75□□□□□ -0.69
TMED9-201ENST00000332598 A0A087WYN8 130 aa10.74□□□□□ -0.69
TMED9-201ENST00000332598 VAMP3Q15836 100 aa10.74□□□□□ -0.69
TMED9-201ENST00000332598 HIST1H4GQ99525 98 aa10.74□□□□□ -0.69
TMED9-201ENST00000332598 LITAFQ99732 161 aa10.74□□□□□ -0.69
TMED9-201ENST00000332598 SPANXDQ9BXN6 97 aa10.74□□□□□ -0.69
TMED9-201ENST00000332598 SPANXCQ9NY87 97 aa10.74□□□□□ -0.69
TMED9-201ENST00000332598 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMED9-201ENST00000332598 FLG2Q5D862 2391 aaPredicted RBP10.73□□□□□ -0.69
TMED9-201ENST00000332598 IGKV2-24A0A0C4DH68 120 aa10.73□□□□□ -0.69
TMED9-201ENST00000332598 SYCNQ0VAF6 134 aa10.73□□□□□ -0.69
TMED9-201ENST00000332598 COX17Q14061 63 aa10.73□□□□□ -0.69
TMED9-201ENST00000332598 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
TMED9-201ENST00000332598 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
TMED9-201ENST00000332598 IFITM1P13164 125 aa10.72□□□□□ -0.69
TMED9-201ENST00000332598 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
TMED9-201ENST00000332598 COPS9Q8WXC6 57 aa10.72□□□□□ -0.69
TMED9-201ENST00000332598 A0A096LNI7 61 aa10.71□□□□□ -0.69
TMED9-201ENST00000332598 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
TMED9-201ENST00000332598 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
TMED9-201ENST00000332598 C2orf82Q6UX34 121 aa10.71□□□□□ -0.69
TMED9-201ENST00000332598 CEND1Q8N111 149 aa10.71□□□□□ -0.69
TMED9-201ENST00000332598 TRBV30A0A0K0K1B3 111 aa10.7□□□□□ -0.7
TMED9-201ENST00000332598 Q6ZRU5 148 aa10.7□□□□□ -0.7
TMED9-201ENST00000332598 GTF2H5Q6ZYL4 71 aa10.7□□□□□ -0.7
TMED9-201ENST00000332598 PLAC8Q9NZF1 115 aa10.7□□□□□ -0.7
TMED9-201ENST00000332598 ERG28Q9UKR5 140 aa10.7□□□□□ -0.7
TMED9-201ENST00000332598 SMIM13P0DJ93 91 aa10.68□□□□□ -0.7
TMED9-201ENST00000332598 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
TMED9-201ENST00000332598 CAMK2N2Q96S95 79 aa10.68□□□□□ -0.7
TMED9-201ENST00000332598 TMEM238LA0A1B0GVL6 79 aa10.68□□□□□ -0.7
TMED9-201ENST00000332598 A6NJY4 79 aa10.68□□□□□ -0.7
TMED9-201ENST00000332598 UNQ6190/PRO20217Q6UXQ8 127 aa10.68□□□□□ -0.7
TMED9-201ENST00000332598 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
TMED9-201ENST00000332598 LINC00158P58513 81 aa10.66□□□□□ -0.7
TMED9-201ENST00000332598 RPL24P83731 157 aaKnown RBP10.66□□□□□ -0.7
TMED9-201ENST00000332598 VPS13BQ7Z7G8 4022 aa10.66□□□□□ -0.7
TMED9-201ENST00000332598 MYCBP2O75592 4640 aa10.66□□□□□ -0.7
TMED9-201ENST00000332598 C10orf25Q5T742 122 aa10.65□□□□□ -0.7
TMED9-201ENST00000332598 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.7
TMED9-201ENST00000332598 FXYD2P54710 66 aa10.64□□□□□ -0.71
TMED9-201ENST00000332598 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
TMED9-201ENST00000332598 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
TMED9-201ENST00000332598 LINC00308Q8TCZ7 52 aa10.64□□□□□ -0.71
TMED9-201ENST00000332598 C6orf48Q9UBA6 75 aa10.64□□□□□ -0.71
TMED9-201ENST00000332598 LOC107984156A0A0G2JMH3 177 aa10.63□□□□□ -0.71
TMED9-201ENST00000332598 LOC107984640A0A0U1RRK4 108 aa10.63□□□□□ -0.71
TMED9-201ENST00000332598 GAGE2BQ13066 116 aa10.63□□□□□ -0.71
TMED9-201ENST00000332598 ARL17AQ8IVW1 177 aa10.63□□□□□ -0.71
TMED9-201ENST00000332598 PKIGQ9Y2B9 76 aa10.63□□□□□ -0.71
TMED9-201ENST00000332598 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
TMED9-201ENST00000332598 K7EP34 96 aa10.62□□□□□ -0.71
TMED9-201ENST00000332598 PFN2P35080 140 aa10.62□□□□□ -0.71
TMED9-201ENST00000332598 A0A0U1RRA0 63 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 FABP2P12104 132 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
TMED9-201ENST00000332598 J3QL48 77 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 DAND5Q8N907 189 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 C7orf33Q8WU49 177 aa10.61□□□□□ -0.71
TMED9-201ENST00000332598 DMBT1Q9UGM3 2413 aaPredicted RBP10.6□□□□□ -0.71
TMED9-201ENST00000332598 H3BUT2 72 aa10.6□□□□□ -0.71
TMED9-201ENST00000332598 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
TMED9-201ENST00000332598 C9orf116Q5BN46 136 aaPredicted RBP10.6□□□□□ -0.71
TMED9-201ENST00000332598 A4D1N5 150 aa10.59□□□□□ -0.71
TMED9-201ENST00000332598 NDUFC2-KCTD14E9PQ53 114 aa10.59□□□□□ -0.71
TMED9-201ENST00000332598 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
TMED9-201ENST00000332598 A0A1W2PNN7 141 aa10.58□□□□□ -0.72
TMED9-201ENST00000332598 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
TMED9-201ENST00000332598 CBY1Q9Y3M2 126 aa10.58□□□□□ -0.72
TMED9-201ENST00000332598 A0A0B4J2C4 111 aa10.57□□□□□ -0.72
TMED9-201ENST00000332598 SND1-IT1Q9HBX3 110 aa10.57□□□□□ -0.72
TMED9-201ENST00000332598 NHP2Q9NX24 153 aaKnown RBP10.57□□□□□ -0.72
TMED9-201ENST00000332598 SPCS1Q9Y6A9 102 aa10.56□□□□□ -0.72
TMED9-201ENST00000332598 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
TMED9-201ENST00000332598 NDUFC2O95298 119 aa10.55□□□□□ -0.72
TMED9-201ENST00000332598 NPC2P61916 151 aa10.55□□□□□ -0.72
TMED9-201ENST00000332598 CFC1BP0CG36 223 aa10.55□□□□□ -0.72
TMED9-201ENST00000332598 CFC1P0CG37 223 aa10.55□□□□□ -0.72
TMED9-201ENST00000332598 HERC1Q15751 4861 aa10.54□□□□□ -0.72
TMED9-201ENST00000332598 OXTP01178 125 aa10.54□□□□□ -0.72
TMED9-201ENST00000332598 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
TMED9-201ENST00000332598 Q6ZRP5 223 aa10.54□□□□□ -0.72
TMED9-201ENST00000332598 RAB37Q96AX2 223 aa10.54□□□□□ -0.72
TMED9-201ENST00000332598 K7ERU9 68 aa10.53□□□□□ -0.72
TMED9-201ENST00000332598 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
TMED9-201ENST00000332598 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.73
TMED9-201ENST00000332598 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
TMED9-201ENST00000332598 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
TMED9-201ENST00000332598 OCIAD2Q56VL3 154 aa10.5□□□□□ -0.73
TMED9-201ENST00000332598 TRAV13-2A0A0B4J235 113 aa10.49□□□□□ -0.73
TMED9-201ENST00000332598 FAM168BA1KXE4 195 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms