RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 M0QXV9 152 aa10.02□□□□□ -0.81
LRRC28-202ENST00000331450 TIMM17BO60830 172 aa10.01□□□□□ -0.81
LRRC28-202ENST00000331450 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-202ENST00000331450 Q5VSD8 79 aa10.01□□□□□ -0.81
LRRC28-202ENST00000331450 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
LRRC28-202ENST00000331450 Q8NDZ9 215 aa10.01□□□□□ -0.81
LRRC28-202ENST00000331450 LOC107984156A0A0G2JMH3 177 aa10□□□□□ -0.81
LRRC28-202ENST00000331450 VPREB1P12018 145 aa10□□□□□ -0.81
LRRC28-202ENST00000331450 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
LRRC28-202ENST00000331450 ARL17AQ8IVW1 177 aa10□□□□□ -0.81
LRRC28-202ENST00000331450 DAND5Q8N907 189 aa10□□□□□ -0.81
LRRC28-202ENST00000331450 TP73-AS1Q9UF72 201 aa10□□□□□ -0.81
LRRC28-202ENST00000331450 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
LRRC28-202ENST00000331450 C7orf33Q8WU49 177 aa9.99□□□□□ -0.81
LRRC28-202ENST00000331450 C22orf24Q9Y442 160 aa9.99□□□□□ -0.81
LRRC28-202ENST00000331450 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
LRRC28-202ENST00000331450 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
LRRC28-202ENST00000331450 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
LRRC28-202ENST00000331450 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
LRRC28-202ENST00000331450 SOSTDC1Q6X4U4 206 aa9.96□□□□□ -0.82
LRRC28-202ENST00000331450 SCGB1D4Q6XE38 83 aa9.96□□□□□ -0.82
LRRC28-202ENST00000331450 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.82
LRRC28-202ENST00000331450 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.82
LRRC28-202ENST00000331450 EIF4EBP3O60516 100 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-202ENST00000331450 PLA2G1BP04054 148 aaKnown RBP9.95□□□□□ -0.82
LRRC28-202ENST00000331450 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
LRRC28-202ENST00000331450 SPATA45Q537H7 98 aa9.95□□□□□ -0.82
LRRC28-202ENST00000331450 BOD1L2Q8IYS8 172 aa9.95□□□□□ -0.82
LRRC28-202ENST00000331450 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
LRRC28-202ENST00000331450 TMEM238C9JI98 176 aa9.94□□□□□ -0.82
LRRC28-202ENST00000331450 COX8AP10176 69 aa9.94□□□□□ -0.82
LRRC28-202ENST00000331450 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
LRRC28-202ENST00000331450 SPANXDQ9BXN6 97 aa9.94□□□□□ -0.82
LRRC28-202ENST00000331450 SPANXCQ9NY87 97 aa9.94□□□□□ -0.82
LRRC28-202ENST00000331450 FAT1Q14517 4588 aa9.94□□□□□ -0.82
LRRC28-202ENST00000331450 LBHQ53QV2 105 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-202ENST00000331450 LINC00308Q8TCZ7 52 aa9.93□□□□□ -0.82
LRRC28-202ENST00000331450 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
LRRC28-202ENST00000331450 DLEU1O43261 78 aa9.92□□□□□ -0.82
LRRC28-202ENST00000331450 NPC2P61916 151 aa9.92□□□□□ -0.82
LRRC28-202ENST00000331450 MIEN1Q9BRT3 115 aa9.92□□□□□ -0.82
LRRC28-202ENST00000331450 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
LRRC28-202ENST00000331450 NDUFC2O95298 119 aa9.91□□□□□ -0.82
LRRC28-202ENST00000331450 UBE2BP63146 152 aa9.91□□□□□ -0.82
LRRC28-202ENST00000331450 PPDPFQ9H3Y8 114 aa9.91□□□□□ -0.82
LRRC28-202ENST00000331450 Q6ZVH6 145 aa9.9□□□□□ -0.82
LRRC28-202ENST00000331450 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-202ENST00000331450 GAGE10A6NGK3 116 aa9.89□□□□□ -0.83
LRRC28-202ENST00000331450 M0R378 163 aa9.89□□□□□ -0.83
LRRC28-202ENST00000331450 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
LRRC28-202ENST00000331450 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
LRRC28-202ENST00000331450 LOC105371267A0A1B0GV96 52 aa9.88□□□□□ -0.83
LRRC28-202ENST00000331450 RPL37AP8A6NKH3 93 aa9.88□□□□□ -0.83
LRRC28-202ENST00000331450 NCR3O14931 201 aa9.88□□□□□ -0.83
LRRC28-202ENST00000331450 SRRM2Q9UQ35 2752 aaKnown RBP9.87□□□□□ -0.83
LRRC28-202ENST00000331450 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
LRRC28-202ENST00000331450 IFITM1P13164 125 aa9.87□□□□□ -0.83
LRRC28-202ENST00000331450 HNRNPA3P51991 378 aaKnown RBP9.87□□□□□ -0.83
LRRC28-202ENST00000331450 IGKV2-28A0A075B6P5 120 aa9.86□□□□□ -0.83
LRRC28-202ENST00000331450 IGKV2D-28P01615 120 aa9.86□□□□□ -0.83
LRRC28-202ENST00000331450 SLC25A34Q6PIV7 304 aa9.86□□□□□ -0.83
LRRC28-202ENST00000331450 VPS13BQ7Z7G8 4022 aa9.86□□□□□ -0.83
LRRC28-202ENST00000331450 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
LRRC28-202ENST00000331450 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
LRRC28-202ENST00000331450 SMIM6P0DI80 62 aa9.84□□□□□ -0.83
LRRC28-202ENST00000331450 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
LRRC28-202ENST00000331450 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
LRRC28-202ENST00000331450 HIGD1BQ9P298 99 aa9.84□□□□□ -0.83
LRRC28-202ENST00000331450 TRBV10-3A0A0K0K1G6 114 aa9.82□□□□□ -0.84
LRRC28-202ENST00000331450 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
LRRC28-202ENST00000331450 S100A12P80511 92 aa9.82□□□□□ -0.84
LRRC28-202ENST00000331450 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRRC28-202ENST00000331450 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
LRRC28-202ENST00000331450 BCE1O60756 84 aa9.81□□□□□ -0.84
LRRC28-202ENST00000331450 IGLV6-57P01721 117 aa9.81□□□□□ -0.84
LRRC28-202ENST00000331450 PRYO14603 147 aa9.8□□□□□ -0.84
LRRC28-202ENST00000331450 INAFM2P0DMQ5 153 aa9.8□□□□□ -0.84
LRRC28-202ENST00000331450 DDTP30046 118 aa9.8□□□□□ -0.84
LRRC28-202ENST00000331450 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
LRRC28-202ENST00000331450 KCNQ1DNQ9H478 68 aa9.8□□□□□ -0.84
LRRC28-202ENST00000331450 SPRR1AP35321 89 aa9.79□□□□□ -0.84
LRRC28-202ENST00000331450 LINC00518Q8N0U6 118 aa9.79□□□□□ -0.84
LRRC28-202ENST00000331450 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
LRRC28-202ENST00000331450 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
LRRC28-202ENST00000331450 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
LRRC28-202ENST00000331450 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
LRRC28-202ENST00000331450 S100A7L2Q5SY68 101 aa9.77□□□□□ -0.85
LRRC28-202ENST00000331450 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
LRRC28-202ENST00000331450 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-202ENST00000331450 UQCR10Q9UDW1 63 aa9.76□□□□□ -0.85
LRRC28-202ENST00000331450 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
LRRC28-202ENST00000331450 A4D1N5 150 aa9.75□□□□□ -0.85
LRRC28-202ENST00000331450 ZNF861PO60384 105 aa9.75□□□□□ -0.85
LRRC28-202ENST00000331450 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
LRRC28-202ENST00000331450 TAL2Q16559 108 aa9.74□□□□□ -0.85
LRRC28-202ENST00000331450 RPL28P46779 137 aaKnown RBP9.73□□□□□ -0.85
LRRC28-202ENST00000331450 PRLHP81277 87 aa9.73□□□□□ -0.85
LRRC28-202ENST00000331450 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
LRRC28-202ENST00000331450 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
LRRC28-202ENST00000331450 H0Y9J4 135 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms