RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 LINC01620Q4KN68 170 aa11.7□□□□□ -0.54
RAB39A-201ENST00000320578 SMIM11BQ8TCY0 68 aa11.7□□□□□ -0.54
RAB39A-201ENST00000320578 CARD19Q96LW7 228 aa11.7□□□□□ -0.54
RAB39A-201ENST00000320578 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
RAB39A-201ENST00000320578 WFDC2Q14508 124 aa11.69□□□□□ -0.54
RAB39A-201ENST00000320578 OR13C6PQ8NH95 151 aa11.69□□□□□ -0.54
RAB39A-201ENST00000320578 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
RAB39A-201ENST00000320578 H0YGX0 51 aa11.68□□□□□ -0.54
RAB39A-201ENST00000320578 Q8NDZ9 215 aa11.67□□□□□ -0.54
RAB39A-201ENST00000320578 SMCPP49901 116 aaPredicted RBP11.67□□□□□ -0.54
RAB39A-201ENST00000320578 SLPIP03973 132 aa11.66□□□□□ -0.54
RAB39A-201ENST00000320578 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
RAB39A-201ENST00000320578 TRACP01848 142 aa11.65□□□□□ -0.54
RAB39A-201ENST00000320578 PRR3P79522 188 aaKnown RBP11.65□□□□□ -0.54
RAB39A-201ENST00000320578 C9JAW5 83 aa11.65□□□□□ -0.55
RAB39A-201ENST00000320578 SLC25A20O43772 301 aa11.64□□□□□ -0.55
RAB39A-201ENST00000320578 IGLV6-57P01721 117 aa11.64□□□□□ -0.55
RAB39A-201ENST00000320578 C14orf177Q52M58 125 aa11.64□□□□□ -0.55
RAB39A-201ENST00000320578 Q6ZRP5 223 aa11.64□□□□□ -0.55
RAB39A-201ENST00000320578 XAGE1AQ9HD64 81 aa11.64□□□□□ -0.55
RAB39A-201ENST00000320578 OCIAD2Q56VL3 154 aa11.63□□□□□ -0.55
RAB39A-201ENST00000320578 CSMD3Q7Z407 3707 aa11.63□□□□□ -0.55
RAB39A-201ENST00000320578 PSCAO43653 123 aa11.63□□□□□ -0.55
RAB39A-201ENST00000320578 VPREB1P12018 145 aa11.63□□□□□ -0.55
RAB39A-201ENST00000320578 S100A7L2Q5SY68 101 aa11.63□□□□□ -0.55
RAB39A-201ENST00000320578 PLECQ15149 4684 aaKnown RBP11.62□□□□□ -0.55
RAB39A-201ENST00000320578 H3BT86 120 aa11.62□□□□□ -0.55
RAB39A-201ENST00000320578 NCR3O14931 201 aa11.62□□□□□ -0.55
RAB39A-201ENST00000320578 MTURNQ8N3F0 131 aa11.62□□□□□ -0.55
RAB39A-201ENST00000320578 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
RAB39A-201ENST00000320578 CNBPP62633 177 aaKnown RBP11.61□□□□□ -0.55
RAB39A-201ENST00000320578 K7ERU9 68 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 ETDBQ3ZM63 59 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 ANKRD29Q8N6D5 301 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 M0R378 163 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
RAB39A-201ENST00000320578 A0A1B0GX51 115 aa11.59□□□□□ -0.55
RAB39A-201ENST00000320578 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
RAB39A-201ENST00000320578 TEN1Q86WV5 123 aa11.59□□□□□ -0.55
RAB39A-201ENST00000320578 C9orf129Q5T035 196 aaKnown RBP11.58□□□□□ -0.56
RAB39A-201ENST00000320578 FAM218AQ96MZ4 157 aa11.58□□□□□ -0.56
RAB39A-201ENST00000320578 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
RAB39A-201ENST00000320578 LECT2O14960 151 aa11.58□□□□□ -0.56
RAB39A-201ENST00000320578 Q6ZRN7 208 aaPredicted RBP11.58□□□□□ -0.56
RAB39A-201ENST00000320578 FBN3Q75N90 2809 aa11.57□□□□□ -0.56
RAB39A-201ENST00000320578 WWC2-AS2Q96NR7 200 aa11.56□□□□□ -0.56
RAB39A-201ENST00000320578 VPS13DQ5THJ4 4388 aa11.56□□□□□ -0.56
RAB39A-201ENST00000320578 IGLV5-37A0A075B6J1 123 aa11.56□□□□□ -0.56
RAB39A-201ENST00000320578 STARD9Q9P2P6 4700 aa11.55□□□□□ -0.56
RAB39A-201ENST00000320578 LRCOL1A6NCL2 159 aa11.55□□□□□ -0.56
RAB39A-201ENST00000320578 TRBV10-3A0A0K0K1G6 114 aa11.54□□□□□ -0.56
RAB39A-201ENST00000320578 J3QR89 54 aa11.53□□□□□ -0.56
RAB39A-201ENST00000320578 TRBV7-6A0A0J9YX20 115 aa11.53□□□□□ -0.56
RAB39A-201ENST00000320578 C6orf99Q4VX62 202 aa11.53□□□□□ -0.56
RAB39A-201ENST00000320578 Q6ZR54 194 aa11.53□□□□□ -0.56
RAB39A-201ENST00000320578 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
RAB39A-201ENST00000320578 TRAV23DV6A0A075B6W5 121 aa11.52□□□□□ -0.57
RAB39A-201ENST00000320578 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
RAB39A-201ENST00000320578 A0A087WYN8 130 aa11.51□□□□□ -0.57
RAB39A-201ENST00000320578 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
RAB39A-201ENST00000320578 SNCGO76070 127 aa11.51□□□□□ -0.57
RAB39A-201ENST00000320578 DNAL4O96015 105 aa11.51□□□□□ -0.57
RAB39A-201ENST00000320578 LYSTQ99698 3801 aa11.51□□□□□ -0.57
RAB39A-201ENST00000320578 NKAPP1Q8N9T2 125 aa11.5□□□□□ -0.57
RAB39A-201ENST00000320578 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
RAB39A-201ENST00000320578 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
RAB39A-201ENST00000320578 BAALC-AS2P0C853 105 aa11.49□□□□□ -0.57
RAB39A-201ENST00000320578 GAGE2BQ13066 116 aa11.49□□□□□ -0.57
RAB39A-201ENST00000320578 C16orf90A8MZG2 172 aa11.48□□□□□ -0.57
RAB39A-201ENST00000320578 ZNF73O43830 326 aaPredicted RBP11.48□□□□□ -0.57
RAB39A-201ENST00000320578 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
RAB39A-201ENST00000320578 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
RAB39A-201ENST00000320578 Q8N814 137 aa11.47□□□□□ -0.57
RAB39A-201ENST00000320578 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
RAB39A-201ENST00000320578 C3orf84H3BNL1 204 aa11.46□□□□□ -0.58
RAB39A-201ENST00000320578 C9orf163Q8N9P6 203 aa11.46□□□□□ -0.58
RAB39A-201ENST00000320578 M0R2N4 97 aa11.45□□□□□ -0.58
RAB39A-201ENST00000320578 C7orf33Q8WU49 177 aa11.45□□□□□ -0.58
RAB39A-201ENST00000320578 ELOF1P60002 83 aaKnown RBP11.44□□□□□ -0.58
RAB39A-201ENST00000320578 COX7BP24311 80 aa11.43□□□□□ -0.58
RAB39A-201ENST00000320578 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
RAB39A-201ENST00000320578 hADV29S1A0JD25 119 aa11.42□□□□□ -0.58
RAB39A-201ENST00000320578 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
RAB39A-201ENST00000320578 C22orf24Q9Y442 160 aa11.42□□□□□ -0.58
RAB39A-201ENST00000320578 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
RAB39A-201ENST00000320578 H3BQ85 93 aa11.42□□□□□ -0.58
RAB39A-201ENST00000320578 LINC00476Q8WZB0 136 aa11.42□□□□□ -0.58
RAB39A-201ENST00000320578 DNAH10Q8IVF4 4471 aa11.41□□□□□ -0.58
RAB39A-201ENST00000320578 A0A087WTM6 91 aa11.41□□□□□ -0.58
RAB39A-201ENST00000320578 A0A096LNI7 61 aa11.41□□□□□ -0.58
RAB39A-201ENST00000320578 TEX49A0A1B0GTD5 131 aa11.41□□□□□ -0.58
RAB39A-201ENST00000320578 IGLV1-50A0A075B6I6 118 aa11.4□□□□□ -0.58
RAB39A-201ENST00000320578 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
RAB39A-201ENST00000320578 PRYO14603 147 aa11.4□□□□□ -0.58
RAB39A-201ENST00000320578 MRPL55Q7Z7F7 128 aaKnown RBP11.39□□□□□ -0.59
RAB39A-201ENST00000320578 LY6G6CO95867 125 aa11.39□□□□□ -0.59
RAB39A-201ENST00000320578 C1orf134Q5TEV5 83 aa11.39□□□□□ -0.59
RAB39A-201ENST00000320578 LINC00474Q9P2X8 69 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms