RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 Q6ZTC4 211 aa6.2□□□□□ -1.42
USF3-201ENST00000316407 SMCR5Q8TEV8 140 aa6.2□□□□□ -1.42
USF3-201ENST00000316407 EGFEM1PQ0D2K5 195 aa6.19□□□□□ -1.42
USF3-201ENST00000316407 LINC01556Q5JQF7 62 aa6.18□□□□□ -1.42
USF3-201ENST00000316407 ZNF702PQ9H963 129 aa6.18□□□□□ -1.42
USF3-201ENST00000316407 PCNTO95613 3336 aa6.18□□□□□ -1.42
USF3-201ENST00000316407 KIAA0087Q14695 138 aa6.18□□□□□ -1.42
USF3-201ENST00000316407 MRGPRG-AS1Q2M3A8 158 aa6.17□□□□□ -1.42
USF3-201ENST00000316407 FHL3Q13643 280 aa6.17□□□□□ -1.42
USF3-201ENST00000316407 INAFM1C9JVW0 142 aa6.16□□□□□ -1.42
USF3-201ENST00000316407 RPL37AP61513 92 aaKnown RBP6.16□□□□□ -1.42
USF3-201ENST00000316407 A8MUN3 132 aa6.16□□□□□ -1.42
USF3-201ENST00000316407 LINC01006Q8NI28 216 aa6.16□□□□□ -1.42
USF3-201ENST00000316407 ACYP2P14621 99 aa6.16□□□□□ -1.42
USF3-201ENST00000316407 LINC00336Q6ZUF6 198 aa6.16□□□□□ -1.42
USF3-201ENST00000316407 Q8NA96 180 aa6.16□□□□□ -1.42
USF3-201ENST00000316407 LY6G6CO95867 125 aa6.15□□□□□ -1.42
USF3-201ENST00000316407 BRI3O95415 125 aa6.14□□□□□ -1.43
USF3-201ENST00000316407 IGLV1-40P01703 118 aa6.14□□□□□ -1.43
USF3-201ENST00000316407 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
USF3-201ENST00000316407 Q6ZQT0 140 aa6.13□□□□□ -1.43
USF3-201ENST00000316407 AKAP13Q12802 2813 aa6.12□□□□□ -1.43
USF3-201ENST00000316407 Q6ZRU5 148 aa6.11□□□□□ -1.43
USF3-201ENST00000316407 ODF3L2Q3SX64 289 aa6.11□□□□□ -1.43
USF3-201ENST00000316407 SPACA4Q8TDM5 124 aa6.11□□□□□ -1.43
USF3-201ENST00000316407 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
USF3-201ENST00000316407 EPG5Q9HCE0 2579 aa6.11□□□□□ -1.43
USF3-201ENST00000316407 LINC01600Q96MT4 127 aa6.11□□□□□ -1.43
USF3-201ENST00000316407 MOBPQ13875 183 aa6.1□□□□□ -1.43
USF3-201ENST00000316407 COA5Q86WW8 74 aa6.1□□□□□ -1.43
USF3-201ENST00000316407 CD164Q04900 197 aa6.1□□□□□ -1.43
USF3-201ENST00000316407 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
USF3-201ENST00000316407 C11orf71Q6IPW1 123 aa6.09□□□□□ -1.43
USF3-201ENST00000316407 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.43
USF3-201ENST00000316407 EP400Q96L91 3159 aa6.09□□□□□ -1.43
USF3-201ENST00000316407 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
USF3-201ENST00000316407 FBXL19-AS1Q494R0 122 aa6.09□□□□□ -1.44
USF3-201ENST00000316407 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
USF3-201ENST00000316407 TP53AIP1Q9HCN2 124 aa6.07□□□□□ -1.44
USF3-201ENST00000316407 A0A1B0GUV1 79 aa6.07□□□□□ -1.44
USF3-201ENST00000316407 CHTF8P0CG12 524 aa6.07□□□□□ -1.44
USF3-201ENST00000316407 LOC110117498A0A087WWA1 95 aa6.07□□□□□ -1.44
USF3-201ENST00000316407 F8WDY8 70 aa6.05□□□□□ -1.44
USF3-201ENST00000316407 C22orf24Q9Y442 160 aa6.05□□□□□ -1.44
USF3-201ENST00000316407 CDSNQ15517 529 aa6.05□□□□□ -1.44
USF3-201ENST00000316407 LY6G6DO95868 133 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 AVPP01185 164 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 CEP350Q5VT06 3117 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 K7EQZ3 153 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 ELOF1P60002 83 aaKnown RBP6.04□□□□□ -1.44
USF3-201ENST00000316407 C11orf72Q8NBR9 251 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 APLNQ9ULZ1 77 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 SMR3AQ99954 134 aa6.04□□□□□ -1.44
USF3-201ENST00000316407 DNAH12Q6ZR08 3092 aa6.03□□□□□ -1.44
USF3-201ENST00000316407 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
USF3-201ENST00000316407 ST20-AS1Q8NBB2 130 aa6.03□□□□□ -1.44
USF3-201ENST00000316407 H3BS24 57 aa6.02□□□□□ -1.45
USF3-201ENST00000316407 NUPR2A6NF83 97 aa6.02□□□□□ -1.45
USF3-201ENST00000316407 TRBV7-4A0A0J9YYF1 115 aa6.02□□□□□ -1.45
USF3-201ENST00000316407 ATRQ13535 2644 aa6.02□□□□□ -1.45
USF3-201ENST00000316407 CENPEQ02224 2701 aa6.01□□□□□ -1.45
USF3-201ENST00000316407 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
USF3-201ENST00000316407 Q6ZRX8 168 aa6.01□□□□□ -1.45
USF3-201ENST00000316407 LINC00167Q96N53 147 aa6.01□□□□□ -1.45
USF3-201ENST00000316407 HECTD1Q9ULT8 2610 aa6.01□□□□□ -1.45
USF3-201ENST00000316407 LINC00313P59037 77 aa6□□□□□ -1.45
USF3-201ENST00000316407 C5orf42Q9H799 3197 aa6□□□□□ -1.45
USF3-201ENST00000316407 BCE1O60756 84 aa6□□□□□ -1.45
USF3-201ENST00000316407 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 H7BZZ5 65 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 Q8NBF4 154 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 KIF25-AS1Q9Y6Z4 181 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 UQCR11O14957 56 aa5.99□□□□□ -1.45
USF3-201ENST00000316407 IGLV1-51P01701 117 aa5.98□□□□□ -1.45
USF3-201ENST00000316407 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
USF3-201ENST00000316407 EPM2AB3EWF7 344 aa5.98□□□□□ -1.45
USF3-201ENST00000316407 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
USF3-201ENST00000316407 IGLV5-45A0A087WSX0 123 aa5.97□□□□□ -1.45
USF3-201ENST00000316407 LCA10Q71F78 164 aa5.97□□□□□ -1.45
USF3-201ENST00000316407 A0A0D9SG42 100 aa5.97□□□□□ -1.45
USF3-201ENST00000316407 Q96NJ1 140 aa5.96□□□□□ -1.46
USF3-201ENST00000316407 LITAFQ99732 161 aa5.96□□□□□ -1.46
USF3-201ENST00000316407 IGLV6-57P01721 117 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 LINC00315P59091 139 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
USF3-201ENST00000316407 ERC2-IT1O76042 136 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 H3BPC8 53 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 COL4A2P08572 1712 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 A0A0G2JQZ4 141 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 A0A1W2PNN7 141 aa5.95□□□□□ -1.46
USF3-201ENST00000316407 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
USF3-201ENST00000316407 C1orf134Q5TEV5 83 aa5.94□□□□□ -1.46
USF3-201ENST00000316407 MGAM2Q2M2H8 2515 aa5.94□□□□□ -1.46
USF3-201ENST00000316407 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms