RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 TM2D3Q9BRN9 247 aa12.79□□□□□ -0.36
CD55-201ENST00000314754 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
CD55-201ENST00000314754 KRTAP26-1Q6PEX3 210 aa12.78□□□□□ -0.36
CD55-201ENST00000314754 C15orf53Q8NAA6 179 aa12.78□□□□□ -0.36
CD55-201ENST00000314754 BAALC-AS2P0C853 105 aa12.78□□□□□ -0.36
CD55-201ENST00000314754 A0A087WYN8 130 aa12.77□□□□□ -0.37
CD55-201ENST00000314754 K7EIL1 84 aa12.77□□□□□ -0.37
CD55-201ENST00000314754 TMEM126AQ9H061 195 aa12.77□□□□□ -0.37
CD55-201ENST00000314754 SMIM20Q8N5G0 67 aa12.76□□□□□ -0.37
CD55-201ENST00000314754 TRAV10A0A0B4J240 114 aa12.76□□□□□ -0.37
CD55-201ENST00000314754 FAM240AA0A1B0GVK7 77 aa12.76□□□□□ -0.37
CD55-201ENST00000314754 DNAL4O96015 105 aa12.76□□□□□ -0.37
CD55-201ENST00000314754 Q8NDZ9 215 aa12.76□□□□□ -0.37
CD55-201ENST00000314754 Q9HAA7 133 aa12.76□□□□□ -0.37
CD55-201ENST00000314754 MRAPQ8TCY5 172 aa12.74□□□□□ -0.37
CD55-201ENST00000314754 C6orf48Q9UBA6 75 aa12.74□□□□□ -0.37
CD55-201ENST00000314754 ZNF561-AS1K7EIQ3 104 aa12.73□□□□□ -0.37
CD55-201ENST00000314754 C1orf43Q9BWL3 253 aa12.73□□□□□ -0.37
CD55-201ENST00000314754 MGAM2Q2M2H8 2515 aa12.73□□□□□ -0.37
CD55-201ENST00000314754 C22orf24Q9Y442 160 aa12.73□□□□□ -0.37
CD55-201ENST00000314754 NCR3O14931 201 aa12.72□□□□□ -0.37
CD55-201ENST00000314754 DNAH10OSP0CZ25 163 aa12.72□□□□□ -0.37
CD55-201ENST00000314754 LECT2O14960 151 aa12.71□□□□□ -0.37
CD55-201ENST00000314754 HIGD2BQ4VC39 106 aa12.71□□□□□ -0.37
CD55-201ENST00000314754 TRBV7-7A0A0K0K1E9 115 aa12.7□□□□□ -0.38
CD55-201ENST00000314754 C15orf56Q8N910 161 aa12.7□□□□□ -0.38
CD55-201ENST00000314754 CAMK2N2Q96S95 79 aa12.7□□□□□ -0.38
CD55-201ENST00000314754 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
CD55-201ENST00000314754 S100A7L2Q5SY68 101 aa12.69□□□□□ -0.38
CD55-201ENST00000314754 IGKV2D-24A0A075B6R9 120 aa12.68□□□□□ -0.38
CD55-201ENST00000314754 C2orf48Q96LS8 159 aa12.68□□□□□ -0.38
CD55-201ENST00000314754 A0A1B0GX51 115 aa12.67□□□□□ -0.38
CD55-201ENST00000314754 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
CD55-201ENST00000314754 Q6ZRU5 148 aa12.65□□□□□ -0.38
CD55-201ENST00000314754 LINC00588Q9Y4M8 146 aa12.65□□□□□ -0.38
CD55-201ENST00000314754 IGLV6-57P01721 117 aa12.64□□□□□ -0.39
CD55-201ENST00000314754 C6orf99Q4VX62 202 aa12.64□□□□□ -0.39
CD55-201ENST00000314754 IMUPQ9GZP8 106 aa12.64□□□□□ -0.39
CD55-201ENST00000314754 XAGE1AQ9HD64 81 aa12.64□□□□□ -0.39
CD55-201ENST00000314754 F8WDY8 70 aa12.64□□□□□ -0.39
CD55-201ENST00000314754 RPL18AQ02543 176 aaKnown RBP12.64□□□□□ -0.39
CD55-201ENST00000314754 DNAH1Q9P2D7 4330 aa12.63□□□□□ -0.39
CD55-201ENST00000314754 ACYP1P07311 99 aa12.63□□□□□ -0.39
CD55-201ENST00000314754 LINC00167Q96N53 147 aa12.63□□□□□ -0.39
CD55-201ENST00000314754 ORMDL1Q9P0S3 153 aa12.63□□□□□ -0.39
CD55-201ENST00000314754 LYSTQ99698 3801 aa12.63□□□□□ -0.39
CD55-201ENST00000314754 Q8N814 137 aa12.62□□□□□ -0.39
CD55-201ENST00000314754 NDUFC2-KCTD14E9PQ53 114 aa12.61□□□□□ -0.39
CD55-201ENST00000314754 SLPIP03973 132 aa12.61□□□□□ -0.39
CD55-201ENST00000314754 OBSCN-AS1Q96MR7 158 aa12.6□□□□□ -0.39
CD55-201ENST00000314754 DNAH9Q9NYC9 4486 aa12.59□□□□□ -0.39
CD55-201ENST00000314754 MDFIQ99750 246 aa12.59□□□□□ -0.39
CD55-201ENST00000314754 C9orf129Q5T035 196 aaKnown RBP12.58□□□□□ -0.4
CD55-201ENST00000314754 SYCNQ0VAF6 134 aa12.57□□□□□ -0.4
CD55-201ENST00000314754 TRBV10-3A0A0K0K1G6 114 aa12.57□□□□□ -0.4
CD55-201ENST00000314754 LINC00575Q6W349 94 aa12.57□□□□□ -0.4
CD55-201ENST00000314754 STAB2Q8WWQ8 2551 aa12.57□□□□□ -0.4
CD55-201ENST00000314754 VPREB1P12018 145 aa12.56□□□□□ -0.4
CD55-201ENST00000314754 UPK3BQ9BT76 320 aa12.56□□□□□ -0.4
CD55-201ENST00000314754 TRAV23DV6A0A075B6W5 121 aa12.54□□□□□ -0.4
CD55-201ENST00000314754 TMEM256-PLSCR3K7ERE1 68 aa12.54□□□□□ -0.4
CD55-201ENST00000314754 FAM236AA0A1B0GUQ0 79 aa12.53□□□□□ -0.4
CD55-201ENST00000314754 FAM236BA0A1B0GV22 79 aa12.53□□□□□ -0.4
CD55-201ENST00000314754 Q6ZRP5 223 aa12.53□□□□□ -0.4
CD55-201ENST00000314754 C14orf132Q9NPU4 83 aa12.53□□□□□ -0.4
CD55-201ENST00000314754 GAGE2AQ6NT46 116 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 RMI2Q96E14 147 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 hADV29S1A0JD25 119 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 M0R378 163 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 LINC00643Q86TS7 51 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 C3orf22Q8N5N4 141 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 DIRC1Q969H9 104 aa12.52□□□□□ -0.41
CD55-201ENST00000314754 CASC10Q5T4H9 136 aa12.51□□□□□ -0.41
CD55-201ENST00000314754 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
CD55-201ENST00000314754 UQCRQO14949 82 aa12.5□□□□□ -0.41
CD55-201ENST00000314754 ZNF73O43830 326 aaPredicted RBP12.5□□□□□ -0.41
CD55-201ENST00000314754 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
CD55-201ENST00000314754 JMJD7-PLA2G4BH0Y9G9 81 aa12.49□□□□□ -0.41
CD55-201ENST00000314754 C9orf153Q5TBE3 101 aa12.49□□□□□ -0.41
CD55-201ENST00000314754 SMCR5Q8TEV8 140 aa12.48□□□□□ -0.41
CD55-201ENST00000314754 DNAH10Q8IVF4 4471 aa12.48□□□□□ -0.41
CD55-201ENST00000314754 CSMD3Q7Z407 3707 aa12.48□□□□□ -0.41
CD55-201ENST00000314754 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
CD55-201ENST00000314754 TLX1NBP0CAT3 122 aa12.47□□□□□ -0.41
CD55-201ENST00000314754 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
CD55-201ENST00000314754 ELOF1P60002 83 aaKnown RBP12.45□□□□□ -0.42
CD55-201ENST00000314754 DNAH7Q8WXX0 4024 aa12.44□□□□□ -0.42
CD55-201ENST00000314754 COX7BP24311 80 aa12.44□□□□□ -0.42
CD55-201ENST00000314754 DYNC2H1Q8NCM8 4307 aaKnown RBP12.43□□□□□ -0.42
CD55-201ENST00000314754 Q6ZQY7 126 aa12.42□□□□□ -0.42
CD55-201ENST00000314754 H3BQ85 93 aa12.42□□□□□ -0.42
CD55-201ENST00000314754 CCKP06307 115 aa12.41□□□□□ -0.42
CD55-201ENST00000314754 NKAPP1Q8N9T2 125 aa12.41□□□□□ -0.42
CD55-201ENST00000314754 J3KT08 172 aa12.4□□□□□ -0.42
CD55-201ENST00000314754 COX7CP15954 63 aa12.4□□□□□ -0.42
CD55-201ENST00000314754 TENM2Q9NT68 2774 aa12.4□□□□□ -0.43
CD55-201ENST00000314754 PLA2G2DQ9UNK4 145 aa12.39□□□□□ -0.43
CD55-201ENST00000314754 HIST1H4AP62805 103 aaKnown RBP12.39□□□□□ -0.43
CD55-201ENST00000314754 SERTAD4-AS1Q5TG53 156 aa12.39□□□□□ -0.43
CD55-201ENST00000314754 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms