RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
CHMP2A-201ENST00000312547 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
CHMP2A-201ENST00000312547 FAM168BA1KXE4 195 aa7.98□□□□□ -1.13
CHMP2A-201ENST00000312547 SMIM6P0DI80 62 aa7.98□□□□□ -1.13
CHMP2A-201ENST00000312547 HAMPP81172 84 aa7.98□□□□□ -1.13
CHMP2A-201ENST00000312547 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
CHMP2A-201ENST00000312547 LOC107984156A0A0G2JMH3 177 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 ARL17AQ8IVW1 177 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 DAND5Q8N907 189 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 C14orf144Q96I85 54 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 TP73-AS1Q9UF72 201 aa7.97□□□□□ -1.13
CHMP2A-201ENST00000312547 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
CHMP2A-201ENST00000312547 HERC1Q15751 4861 aa7.96□□□□□ -1.14
CHMP2A-201ENST00000312547 SOSTDC1Q6X4U4 206 aa7.95□□□□□ -1.14
CHMP2A-201ENST00000312547 Q8NDZ9 215 aa7.95□□□□□ -1.14
CHMP2A-201ENST00000312547 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 EIF4EBP3O60516 100 aaPredicted RBP7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 VPREB1P12018 145 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 S100A12P80511 92 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 SLC25A34Q6PIV7 304 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 FAM19A5Q7Z5A7 132 aaPredicted RBP7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 SPANXDQ9BXN6 97 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 SPANXCQ9NY87 97 aa7.94□□□□□ -1.14
CHMP2A-201ENST00000312547 Q6ZVH6 145 aa7.93□□□□□ -1.14
CHMP2A-201ENST00000312547 LINC00308Q8TCZ7 52 aa7.92□□□□□ -1.14
CHMP2A-201ENST00000312547 PPDPFQ9H3Y8 114 aa7.92□□□□□ -1.14
CHMP2A-201ENST00000312547 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
CHMP2A-201ENST00000312547 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
CHMP2A-201ENST00000312547 M0QXV9 152 aa7.91□□□□□ -1.14
CHMP2A-201ENST00000312547 RPL24P83731 157 aaKnown RBP7.91□□□□□ -1.14
CHMP2A-201ENST00000312547 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
CHMP2A-201ENST00000312547 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
CHMP2A-201ENST00000312547 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
CHMP2A-201ENST00000312547 FAT1Q14517 4588 aa7.9□□□□□ -1.14
CHMP2A-201ENST00000312547 IFITM1P13164 125 aa7.9□□□□□ -1.14
CHMP2A-201ENST00000312547 NPC2P61916 151 aa7.9□□□□□ -1.14
CHMP2A-201ENST00000312547 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
CHMP2A-201ENST00000312547 NDUFC2O95298 119 aa7.89□□□□□ -1.15
CHMP2A-201ENST00000312547 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
CHMP2A-201ENST00000312547 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 LBHQ53QV2 105 aaPredicted RBP7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 C7orf33Q8WU49 177 aa7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 C12orf57Q99622 126 aa7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
CHMP2A-201ENST00000312547 TRBV10-2A0A0K0K1G8 114 aa7.87□□□□□ -1.15
CHMP2A-201ENST00000312547 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHMP2A-201ENST00000312547 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
CHMP2A-201ENST00000312547 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
CHMP2A-201ENST00000312547 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
CHMP2A-201ENST00000312547 LINC00167Q96N53 147 aa7.87□□□□□ -1.15
CHMP2A-201ENST00000312547 M0R378 163 aa7.86□□□□□ -1.15
CHMP2A-201ENST00000312547 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
CHMP2A-201ENST00000312547 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
CHMP2A-201ENST00000312547 GAGE10A6NGK3 116 aa7.85□□□□□ -1.15
CHMP2A-201ENST00000312547 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
CHMP2A-201ENST00000312547 PRO1933Q9H354 126 aa7.85□□□□□ -1.15
CHMP2A-201ENST00000312547 NCR3O14931 201 aa7.84□□□□□ -1.15
CHMP2A-201ENST00000312547 TAL2Q16559 108 aa7.84□□□□□ -1.15
CHMP2A-201ENST00000312547 Q8N1X5 172 aa7.84□□□□□ -1.15
CHMP2A-201ENST00000312547 HIST1H4GQ99525 98 aa7.84□□□□□ -1.15
CHMP2A-201ENST00000312547 IGLV1-50A0A075B6I6 118 aa7.83□□□□□ -1.16
CHMP2A-201ENST00000312547 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
CHMP2A-201ENST00000312547 UBE2BP63146 152 aa7.83□□□□□ -1.16
CHMP2A-201ENST00000312547 RPL37AP8A6NKH3 93 aa7.82□□□□□ -1.16
CHMP2A-201ENST00000312547 IGLV6-57P01721 117 aa7.82□□□□□ -1.16
CHMP2A-201ENST00000312547 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
CHMP2A-201ENST00000312547 TRBV10-3A0A0K0K1G6 114 aa7.81□□□□□ -1.16
CHMP2A-201ENST00000312547 A4D1N5 150 aa7.81□□□□□ -1.16
CHMP2A-201ENST00000312547 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
CHMP2A-201ENST00000312547 RPL37AP61513 92 aaKnown RBP7.81□□□□□ -1.16
CHMP2A-201ENST00000312547 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
CHMP2A-201ENST00000312547 HSD52Q0P140 79 aa7.8□□□□□ -1.16
CHMP2A-201ENST00000312547 Q5VSD8 79 aa7.8□□□□□ -1.16
CHMP2A-201ENST00000312547 CEND1Q8N111 149 aa7.8□□□□□ -1.16
CHMP2A-201ENST00000312547 LINC00337Q8N6G1 96 aa7.8□□□□□ -1.16
CHMP2A-201ENST00000312547 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
CHMP2A-201ENST00000312547 TSTD3H0UI37 97 aa7.79□□□□□ -1.16
CHMP2A-201ENST00000312547 DDTP30046 118 aa7.79□□□□□ -1.16
CHMP2A-201ENST00000312547 KCNQ1DNQ9H478 68 aa7.79□□□□□ -1.16
CHMP2A-201ENST00000312547 MYCBP2O75592 4640 aa7.78□□□□□ -1.16
CHMP2A-201ENST00000312547 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
CHMP2A-201ENST00000312547 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
CHMP2A-201ENST00000312547 PRYO14603 147 aa7.77□□□□□ -1.17
CHMP2A-201ENST00000312547 SPRR1AP35321 89 aa7.77□□□□□ -1.17
CHMP2A-201ENST00000312547 FXYD2P54710 66 aa7.77□□□□□ -1.17
CHMP2A-201ENST00000312547 C1orf137Q5JT78 98 aa7.77□□□□□ -1.17
CHMP2A-201ENST00000312547 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
CHMP2A-201ENST00000312547 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
CHMP2A-201ENST00000312547 BCE1O60756 84 aa7.76□□□□□ -1.17
CHMP2A-201ENST00000312547 REG3GQ6UW15 175 aa7.76□□□□□ -1.17
CHMP2A-201ENST00000312547 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
CHMP2A-201ENST00000312547 KRTAP4-16G5E9R7 235 aaPredicted RBP7.75□□□□□ -1.17
CHMP2A-201ENST00000312547 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
CHMP2A-201ENST00000312547 CFC1BP0CG36 223 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 219.9 ms