RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 SND1-IT1Q9HBX3 110 aa5.67□□□□□ -1.5
PDE4D-201ENST00000309641 PCLOQ9Y6V0 5065 aa5.67□□□□□ -1.5
PDE4D-201ENST00000309641 LGALS3P17931 250 aaKnown RBP5.67□□□□□ -1.5
PDE4D-201ENST00000309641 LINC00158P58513 81 aa5.67□□□□□ -1.5
PDE4D-201ENST00000309641 MYMXA0A1B0GTQ4 84 aa5.66□□□□□ -1.5
PDE4D-201ENST00000309641 SFTA2Q6UW10 78 aa5.66□□□□□ -1.5
PDE4D-201ENST00000309641 DAND5Q8N907 189 aa5.66□□□□□ -1.5
PDE4D-201ENST00000309641 FLG2Q5D862 2391 aaPredicted RBP5.66□□□□□ -1.5
PDE4D-201ENST00000309641 M0QXV9 152 aa5.65□□□□□ -1.5
PDE4D-201ENST00000309641 HERV-K104P63124 156 aa5.65□□□□□ -1.5
PDE4D-201ENST00000309641 COX17Q14061 63 aa5.65□□□□□ -1.5
PDE4D-201ENST00000309641 MEIG1Q5JSS6 88 aa5.65□□□□□ -1.5
PDE4D-201ENST00000309641 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
PDE4D-201ENST00000309641 HNRNPA3P51991 378 aaKnown RBP5.65□□□□□ -1.51
PDE4D-201ENST00000309641 RPL37AP61513 92 aaKnown RBP5.65□□□□□ -1.51
PDE4D-201ENST00000309641 C22orf24Q9Y442 160 aa5.65□□□□□ -1.51
PDE4D-201ENST00000309641 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 A0A0J9YXY3 114 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
PDE4D-201ENST00000309641 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 NMUP48645 174 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 ADAMTSL4-AS1Q5T5F5 129 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 C7orf33Q8WU49 177 aa5.64□□□□□ -1.51
PDE4D-201ENST00000309641 ZNF815PA8K554 130 aa5.63□□□□□ -1.51
PDE4D-201ENST00000309641 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
PDE4D-201ENST00000309641 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 VPREB1P12018 145 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 PRR3P79522 188 aaKnown RBP5.62□□□□□ -1.51
PDE4D-201ENST00000309641 LITAFQ99732 161 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 NPC2P61916 151 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
PDE4D-201ENST00000309641 RPL37AP8A6NKH3 93 aa5.61□□□□□ -1.51
PDE4D-201ENST00000309641 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
PDE4D-201ENST00000309641 MRPL55Q7Z7F7 128 aaKnown RBP5.61□□□□□ -1.51
PDE4D-201ENST00000309641 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
PDE4D-201ENST00000309641 IGLV5-37A0A075B6J1 123 aa5.6□□□□□ -1.51
PDE4D-201ENST00000309641 BOD1L2Q8IYS8 172 aa5.6□□□□□ -1.51
PDE4D-201ENST00000309641 LINC00587B1AMM8 73 aa5.6□□□□□ -1.51
PDE4D-201ENST00000309641 INAFM2P0DMQ5 153 aa5.6□□□□□ -1.51
PDE4D-201ENST00000309641 UBE2BP63146 152 aa5.6□□□□□ -1.51
PDE4D-201ENST00000309641 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
PDE4D-201ENST00000309641 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
PDE4D-201ENST00000309641 AKR1D1P51857 326 aa5.59□□□□□ -1.51
PDE4D-201ENST00000309641 PYY3Q5JQD4 70 aa5.59□□□□□ -1.51
PDE4D-201ENST00000309641 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
PDE4D-201ENST00000309641 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 HSBP1L1C9JCN9 74 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 NCR3O14931 201 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 SCGB1D4Q6XE38 83 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
PDE4D-201ENST00000309641 LOC107984156A0A0G2JMH3 177 aa5.57□□□□□ -1.52
PDE4D-201ENST00000309641 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
PDE4D-201ENST00000309641 LBHQ53QV2 105 aaPredicted RBP5.57□□□□□ -1.52
PDE4D-201ENST00000309641 ARL17AQ8IVW1 177 aa5.57□□□□□ -1.52
PDE4D-201ENST00000309641 TIMM17BO60830 172 aa5.57□□□□□ -1.52
PDE4D-201ENST00000309641 LINC00308Q8TCZ7 52 aa5.57□□□□□ -1.52
PDE4D-201ENST00000309641 SRSF9Q13242 221 aaKnown RBP eCLIP5.56□□□□□ -1.52
PDE4D-201ENST00000309641 C14orf144Q96I85 54 aa5.56□□□□□ -1.52
PDE4D-201ENST00000309641 PKHD1L1Q86WI1 4243 aa5.56□□□□□ -1.52
PDE4D-201ENST00000309641 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 TMEM238C9JI98 176 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 SPATA45Q537H7 98 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 MIEN1Q9BRT3 115 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 M0R378 163 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
PDE4D-201ENST00000309641 COX8AP10176 69 aa5.54□□□□□ -1.52
PDE4D-201ENST00000309641 SPANXDQ9BXN6 97 aa5.54□□□□□ -1.52
PDE4D-201ENST00000309641 SPANXCQ9NY87 97 aa5.54□□□□□ -1.52
PDE4D-201ENST00000309641 TRBV10-3A0A0K0K1G6 114 aa5.53□□□□□ -1.52
PDE4D-201ENST00000309641 TMEM126AQ9H061 195 aa5.53□□□□□ -1.52
PDE4D-201ENST00000309641 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
PDE4D-201ENST00000309641 NDUFC2O95298 119 aa5.52□□□□□ -1.53
PDE4D-201ENST00000309641 MUSTN1Q8IVN3 82 aa5.52□□□□□ -1.53
PDE4D-201ENST00000309641 BCE1O60756 84 aa5.52□□□□□ -1.53
PDE4D-201ENST00000309641 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
PDE4D-201ENST00000309641 SPANXB1Q9NS25 103 aaPredicted RBP5.52□□□□□ -1.53
PDE4D-201ENST00000309641 PRLHP81277 87 aa5.51□□□□□ -1.53
PDE4D-201ENST00000309641 SPINK6Q6UWN8 80 aa5.51□□□□□ -1.53
PDE4D-201ENST00000309641 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 DDTP30046 118 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 C2orf91Q6ZV80 131 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 DMBT1Q9UGM3 2413 aaPredicted RBP5.5□□□□□ -1.53
PDE4D-201ENST00000309641 DLEU1O43261 78 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 ZNF861PO60384 105 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
PDE4D-201ENST00000309641 IFITM1P13164 125 aa5.49□□□□□ -1.53
PDE4D-201ENST00000309641 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
PDE4D-201ENST00000309641 SLC25A34Q6PIV7 304 aa5.49□□□□□ -1.53
PDE4D-201ENST00000309641 Q6ZVH6 145 aa5.49□□□□□ -1.53
PDE4D-201ENST00000309641 FAM19A1Q7Z5A9 133 aa5.49□□□□□ -1.53
PDE4D-201ENST00000309641 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms