RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 Q6ZTC4 211 aa13.32□□□□□ -0.28
LRFN4-201ENST00000309602 OBSCN-AS1Q96MR7 158 aa13.31□□□□□ -0.28
LRFN4-201ENST00000309602 C14orf132Q9NPU4 83 aa13.31□□□□□ -0.28
LRFN4-201ENST00000309602 TRBV7-7A0A0K0K1E9 115 aa13.3□□□□□ -0.28
LRFN4-201ENST00000309602 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
LRFN4-201ENST00000309602 H3BNG1 76 aa13.3□□□□□ -0.28
LRFN4-201ENST00000309602 EGFEM1PQ0D2K5 195 aa13.3□□□□□ -0.28
LRFN4-201ENST00000309602 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
LRFN4-201ENST00000309602 PKD1L1Q8TDX9 2849 aa13.3□□□□□ -0.28
LRFN4-201ENST00000309602 LINC00167Q96N53 147 aa13.29□□□□□ -0.28
LRFN4-201ENST00000309602 Q8N814 137 aa13.28□□□□□ -0.28
LRFN4-201ENST00000309602 MUC7Q8TAX7 377 aa13.28□□□□□ -0.28
LRFN4-201ENST00000309602 C6orf99Q4VX62 202 aa13.27□□□□□ -0.29
LRFN4-201ENST00000309602 LINC00643Q86TS7 51 aa13.27□□□□□ -0.29
LRFN4-201ENST00000309602 A0A1B0GX51 115 aa13.27□□□□□ -0.29
LRFN4-201ENST00000309602 S100A7L2Q5SY68 101 aa13.27□□□□□ -0.29
LRFN4-201ENST00000309602 C6orf48Q9UBA6 75 aa13.27□□□□□ -0.29
LRFN4-201ENST00000309602 GVQW2A0A096LPI5 108 aaPredicted RBP13.25□□□□□ -0.29
LRFN4-201ENST00000309602 CMYA5Q8N3K9 4069 aa13.24□□□□□ -0.29
LRFN4-201ENST00000309602 ANK2Q01484 3957 aa13.24□□□□□ -0.29
LRFN4-201ENST00000309602 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
LRFN4-201ENST00000309602 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
LRFN4-201ENST00000309602 ESRGQ1W209 222 aa13.23□□□□□ -0.29
LRFN4-201ENST00000309602 RPL18AQ02543 176 aaKnown RBP13.22□□□□□ -0.29
LRFN4-201ENST00000309602 TENM3Q9P273 2699 aa13.22□□□□□ -0.29
LRFN4-201ENST00000309602 HIGD2BQ4VC39 106 aa13.22□□□□□ -0.29
LRFN4-201ENST00000309602 IMUPQ9GZP8 106 aa13.21□□□□□ -0.3
LRFN4-201ENST00000309602 IGLV6-57P01721 117 aa13.2□□□□□ -0.3
LRFN4-201ENST00000309602 XAGE1AQ9HD64 81 aa13.2□□□□□ -0.3
LRFN4-201ENST00000309602 LINC00575Q6W349 94 aa13.19□□□□□ -0.3
LRFN4-201ENST00000309602 ZNF561-AS1K7EIQ3 104 aa13.18□□□□□ -0.3
LRFN4-201ENST00000309602 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
LRFN4-201ENST00000309602 TMEM256-PLSCR3K7ERE1 68 aa13.17□□□□□ -0.3
LRFN4-201ENST00000309602 CAMK2N2Q96S95 79 aa13.17□□□□□ -0.3
LRFN4-201ENST00000309602 LINC00846Q9NV44 126 aa13.17□□□□□ -0.3
LRFN4-201ENST00000309602 C15orf56Q8N910 161 aa13.16□□□□□ -0.3
LRFN4-201ENST00000309602 C11orf45Q8TAV5 145 aa13.16□□□□□ -0.3
LRFN4-201ENST00000309602 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
LRFN4-201ENST00000309602 FAM236AA0A1B0GUQ0 79 aa13.15□□□□□ -0.3
LRFN4-201ENST00000309602 FAM236BA0A1B0GV22 79 aa13.15□□□□□ -0.3
LRFN4-201ENST00000309602 DNAH3Q8TD57 4116 aa13.14□□□□□ -0.31
LRFN4-201ENST00000309602 Q6ZRU5 148 aa13.14□□□□□ -0.31
LRFN4-201ENST00000309602 JMJD7-PLA2G4BH0Y9G9 81 aa13.13□□□□□ -0.31
LRFN4-201ENST00000309602 hADV29S1A0JD25 119 aa13.13□□□□□ -0.31
LRFN4-201ENST00000309602 CCKP06307 115 aa13.13□□□□□ -0.31
LRFN4-201ENST00000309602 LINC01556Q5JQF7 62 aa13.12□□□□□ -0.31
LRFN4-201ENST00000309602 C1orf43Q9BWL3 253 aa13.11□□□□□ -0.31
LRFN4-201ENST00000309602 TRAV23DV6A0A075B6W5 121 aa13.1□□□□□ -0.31
LRFN4-201ENST00000309602 IGKV2D-24A0A075B6R9 120 aa13.09□□□□□ -0.31
LRFN4-201ENST00000309602 VPREB1P12018 145 aa13.09□□□□□ -0.31
LRFN4-201ENST00000309602 C2orf48Q96LS8 159 aa13.09□□□□□ -0.31
LRFN4-201ENST00000309602 NOTCH1P46531 2555 aa13.09□□□□□ -0.31
LRFN4-201ENST00000309602 DIRC1Q969H9 104 aa13.08□□□□□ -0.32
LRFN4-201ENST00000309602 Q6JHZ5 121 aa13.07□□□□□ -0.32
LRFN4-201ENST00000309602 IGKV3D-7A0A0C4DH55 119 aa13.07□□□□□ -0.32
LRFN4-201ENST00000309602 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
LRFN4-201ENST00000309602 ZNF73O43830 326 aaPredicted RBP13.05□□□□□ -0.32
LRFN4-201ENST00000309602 PRB2P02812 416 aaPredicted RBP13.05□□□□□ -0.32
LRFN4-201ENST00000309602 Q6ZQY7 126 aa13.05□□□□□ -0.32
LRFN4-201ENST00000309602 DNAH10OSP0CZ25 163 aa13.03□□□□□ -0.32
LRFN4-201ENST00000309602 Q6ZRP5 223 aa13.03□□□□□ -0.32
LRFN4-201ENST00000309602 M0R378 163 aa13.02□□□□□ -0.32
LRFN4-201ENST00000309602 NBEAL1Q6ZS30 2694 aa13.02□□□□□ -0.33
LRFN4-201ENST00000309602 LOC107984640A0A0U1RRK4 108 aa13.01□□□□□ -0.33
LRFN4-201ENST00000309602 COX7BP24311 80 aa13.01□□□□□ -0.33
LRFN4-201ENST00000309602 LAMTOR3Q9UHA4 124 aa13.01□□□□□ -0.33
LRFN4-201ENST00000309602 RBM3P98179 157 aaKnown RBP13.01□□□□□ -0.33
LRFN4-201ENST00000309602 ELOF1P60002 83 aaKnown RBP13□□□□□ -0.33
LRFN4-201ENST00000309602 SYCNQ0VAF6 134 aa13□□□□□ -0.33
LRFN4-201ENST00000309602 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
LRFN4-201ENST00000309602 HIST1H4AP62805 103 aaKnown RBP12.99□□□□□ -0.33
LRFN4-201ENST00000309602 Q6ZQT0 140 aa12.99□□□□□ -0.33
LRFN4-201ENST00000309602 LINC00588Q9Y4M8 146 aa12.99□□□□□ -0.33
LRFN4-201ENST00000309602 F8WDY8 70 aa12.98□□□□□ -0.33
LRFN4-201ENST00000309602 TRBV7-6A0A0J9YX20 115 aa12.98□□□□□ -0.33
LRFN4-201ENST00000309602 MGAM2Q2M2H8 2515 aa12.97□□□□□ -0.33
LRFN4-201ENST00000309602 LOC110117498A0A087WWA1 95 aa12.97□□□□□ -0.33
LRFN4-201ENST00000309602 C5orf47Q569G3 176 aa12.97□□□□□ -0.33
LRFN4-201ENST00000309602 A0A087WVE0 104 aa12.96□□□□□ -0.33
LRFN4-201ENST00000309602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.96□□□□□ -0.33
LRFN4-201ENST00000309602 TM2D3Q9BRN9 247 aa12.96□□□□□ -0.33
LRFN4-201ENST00000309602 MRAPQ8TCY5 172 aa12.96□□□□□ -0.34
LRFN4-201ENST00000309602 M0R2N4 97 aa12.94□□□□□ -0.34
LRFN4-201ENST00000309602 H3BQ85 93 aa12.94□□□□□ -0.34
LRFN4-201ENST00000309602 K7EIL1 84 aa12.94□□□□□ -0.34
LRFN4-201ENST00000309602 MDFIQ99750 246 aa12.94□□□□□ -0.34
LRFN4-201ENST00000309602 CASC10Q5T4H9 136 aa12.93□□□□□ -0.34
LRFN4-201ENST00000309602 C9orf153Q5TBE3 101 aa12.92□□□□□ -0.34
LRFN4-201ENST00000309602 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
LRFN4-201ENST00000309602 HUWE1Q7Z6Z7 4374 aaKnown RBP12.92□□□□□ -0.34
LRFN4-201ENST00000309602 C3orf22Q8N5N4 141 aa12.91□□□□□ -0.34
LRFN4-201ENST00000309602 DSCR8Q96T75 97 aa12.91□□□□□ -0.34
LRFN4-201ENST00000309602 SERTAD4-AS1Q5TG53 156 aa12.91□□□□□ -0.34
LRFN4-201ENST00000309602 UBL5Q9BZL1 73 aa12.9□□□□□ -0.34
LRFN4-201ENST00000309602 ATOX1O00244 68 aa12.9□□□□□ -0.34
LRFN4-201ENST00000309602 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
LRFN4-201ENST00000309602 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
LRFN4-201ENST00000309602 ATP5EP2Q5VTU8 51 aa12.89□□□□□ -0.35
LRFN4-201ENST00000309602 DNAH1Q9P2D7 4330 aa12.88□□□□□ -0.35
LRFN4-201ENST00000309602 UQCRQO14949 82 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 237.3 ms