RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 Q8NDZ9 215 aa13.44□□□□□ -0.26
SSH3-202ENST00000308298 SNCGO76070 127 aa13.44□□□□□ -0.26
SSH3-202ENST00000308298 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
SSH3-202ENST00000308298 Q9HAA7 133 aa13.44□□□□□ -0.26
SSH3-202ENST00000308298 NCR3O14931 201 aa13.43□□□□□ -0.26
SSH3-202ENST00000308298 DNAL4O96015 105 aa13.43□□□□□ -0.26
SSH3-202ENST00000308298 C15orf56Q8N910 161 aa13.42□□□□□ -0.26
SSH3-202ENST00000308298 FAM240AA0A1B0GVK7 77 aa13.42□□□□□ -0.26
SSH3-202ENST00000308298 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
SSH3-202ENST00000308298 HUWE1Q7Z6Z7 4374 aaKnown RBP13.41□□□□□ -0.26
SSH3-202ENST00000308298 IGKV2D-24A0A075B6R9 120 aa13.4□□□□□ -0.26
SSH3-202ENST00000308298 MDFIQ99750 246 aa13.4□□□□□ -0.26
SSH3-202ENST00000308298 LECT2O14960 151 aa13.39□□□□□ -0.27
SSH3-202ENST00000308298 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
SSH3-202ENST00000308298 LINC00588Q9Y4M8 146 aa13.39□□□□□ -0.27
SSH3-202ENST00000308298 S100A7L2Q5SY68 101 aa13.39□□□□□ -0.27
SSH3-202ENST00000308298 C2orf48Q96LS8 159 aa13.39□□□□□ -0.27
SSH3-202ENST00000308298 GAGE2BQ13066 116 aa13.37□□□□□ -0.27
SSH3-202ENST00000308298 GAGE2EQ4V326 116 aa13.37□□□□□ -0.27
SSH3-202ENST00000308298 GAGE2DQ9UEU5 116 aa13.37□□□□□ -0.27
SSH3-202ENST00000308298 Q6ZRU5 148 aa13.36□□□□□ -0.27
SSH3-202ENST00000308298 Q6Q795 121 aa13.35□□□□□ -0.27
SSH3-202ENST00000308298 ACYP1P07311 99 aa13.34□□□□□ -0.27
SSH3-202ENST00000308298 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
SSH3-202ENST00000308298 A0A1B0GX51 115 aa13.34□□□□□ -0.27
SSH3-202ENST00000308298 F8WDY8 70 aa13.34□□□□□ -0.27
SSH3-202ENST00000308298 RPL18AQ02543 176 aaKnown RBP13.34□□□□□ -0.27
SSH3-202ENST00000308298 MGAM2Q2M2H8 2515 aa13.33□□□□□ -0.28
SSH3-202ENST00000308298 C6orf99Q4VX62 202 aa13.32□□□□□ -0.28
SSH3-202ENST00000308298 IGLV6-57P01721 117 aa13.32□□□□□ -0.28
SSH3-202ENST00000308298 ANAPC13Q9BS18 74 aa13.31□□□□□ -0.28
SSH3-202ENST00000308298 NDUFC2-KCTD14E9PQ53 114 aa13.3□□□□□ -0.28
SSH3-202ENST00000308298 LINC00167Q96N53 147 aa13.3□□□□□ -0.28
SSH3-202ENST00000308298 SLPIP03973 132 aa13.3□□□□□ -0.28
SSH3-202ENST00000308298 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
SSH3-202ENST00000308298 Q8N814 137 aa13.3□□□□□ -0.28
SSH3-202ENST00000308298 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
SSH3-202ENST00000308298 UPK3BQ9BT76 320 aa13.29□□□□□ -0.28
SSH3-202ENST00000308298 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
SSH3-202ENST00000308298 TTC32Q5I0X7 151 aa13.27□□□□□ -0.28
SSH3-202ENST00000308298 VPREB1P12018 145 aa13.26□□□□□ -0.29
SSH3-202ENST00000308298 TRBV10-3A0A0K0K1G6 114 aa13.25□□□□□ -0.29
SSH3-202ENST00000308298 RMI2Q96E14 147 aa13.25□□□□□ -0.29
SSH3-202ENST00000308298 LINC00575Q6W349 94 aa13.24□□□□□ -0.29
SSH3-202ENST00000308298 OBSCN-AS1Q96MR7 158 aa13.24□□□□□ -0.29
SSH3-202ENST00000308298 TRAV23DV6A0A075B6W5 121 aa13.23□□□□□ -0.29
SSH3-202ENST00000308298 NDUFV3P56181 108 aaKnown RBP13.23□□□□□ -0.29
SSH3-202ENST00000308298 C9orf129Q5T035 196 aaKnown RBP13.23□□□□□ -0.29
SSH3-202ENST00000308298 Q6ZRP5 223 aa13.23□□□□□ -0.29
SSH3-202ENST00000308298 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
SSH3-202ENST00000308298 B9D2Q9BPU9 175 aa13.21□□□□□ -0.29
SSH3-202ENST00000308298 M0R378 163 aa13.2□□□□□ -0.3
SSH3-202ENST00000308298 CASC10Q5T4H9 136 aa13.2□□□□□ -0.3
SSH3-202ENST00000308298 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
SSH3-202ENST00000308298 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 TRBV7-7A0A0K0K1E9 115 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 TMEM256-PLSCR3K7ERE1 68 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 C14orf132Q9NPU4 83 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 DNAH9Q9NYC9 4486 aa13.19□□□□□ -0.3
SSH3-202ENST00000308298 GAGE2AQ6NT46 116 aa13.18□□□□□ -0.3
SSH3-202ENST00000308298 IMUPQ9GZP8 106 aa13.18□□□□□ -0.3
SSH3-202ENST00000308298 ZNF73O43830 326 aaPredicted RBP13.17□□□□□ -0.3
SSH3-202ENST00000308298 TLX1NBP0CAT3 122 aa13.17□□□□□ -0.3
SSH3-202ENST00000308298 LINC00643Q86TS7 51 aa13.16□□□□□ -0.3
SSH3-202ENST00000308298 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
SSH3-202ENST00000308298 STAB2Q8WWQ8 2551 aa13.14□□□□□ -0.31
SSH3-202ENST00000308298 JMJD7-PLA2G4BH0Y9G9 81 aa13.14□□□□□ -0.31
SSH3-202ENST00000308298 TRBV7-6A0A0J9YX20 115 aa13.13□□□□□ -0.31
SSH3-202ENST00000308298 COX7BP24311 80 aa13.13□□□□□ -0.31
SSH3-202ENST00000308298 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
SSH3-202ENST00000308298 APLNQ9ULZ1 77 aa13.13□□□□□ -0.31
SSH3-202ENST00000308298 ELOF1P60002 83 aaKnown RBP13.12□□□□□ -0.31
SSH3-202ENST00000308298 SMCR5Q8TEV8 140 aa13.12□□□□□ -0.31
SSH3-202ENST00000308298 UBE2DNLQ8IWF7 75 aa13.1□□□□□ -0.31
SSH3-202ENST00000308298 NKAPP1Q8N9T2 125 aa13.1□□□□□ -0.31
SSH3-202ENST00000308298 SERTAD4-AS1Q5TG53 156 aa13.09□□□□□ -0.31
SSH3-202ENST00000308298 Q6ZQY7 126 aa13.09□□□□□ -0.31
SSH3-202ENST00000308298 KRTAP1-5Q9BYS1 174 aa13.09□□□□□ -0.31
SSH3-202ENST00000308298 PLA2G2DQ9UNK4 145 aa13.08□□□□□ -0.31
SSH3-202ENST00000308298 H3BQ85 93 aa13.07□□□□□ -0.32
SSH3-202ENST00000308298 DYNC2H1Q8NCM8 4307 aaKnown RBP13.06□□□□□ -0.32
SSH3-202ENST00000308298 CCKP06307 115 aa13.05□□□□□ -0.32
SSH3-202ENST00000308298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.05□□□□□ -0.32
SSH3-202ENST00000308298 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
SSH3-202ENST00000308298 LINC00528Q8N1L1 170 aa13.04□□□□□ -0.32
SSH3-202ENST00000308298 KCNQ1DNQ9H478 68 aa13.03□□□□□ -0.32
SSH3-202ENST00000308298 IGLV5-37A0A075B6J1 123 aa13.03□□□□□ -0.32
SSH3-202ENST00000308298 LOC107984640A0A0U1RRK4 108 aa13.02□□□□□ -0.33
SSH3-202ENST00000308298 LAMTOR3Q9UHA4 124 aa13.02□□□□□ -0.33
SSH3-202ENST00000308298 LINC00846Q9NV44 126 aa13.01□□□□□ -0.33
SSH3-202ENST00000308298 FAM236AA0A1B0GUQ0 79 aa13.01□□□□□ -0.33
SSH3-202ENST00000308298 FAM236BA0A1B0GV22 79 aa13.01□□□□□ -0.33
SSH3-202ENST00000308298 GHRHP01286 108 aa13.01□□□□□ -0.33
SSH3-202ENST00000308298 LYSTQ99698 3801 aa13□□□□□ -0.33
SSH3-202ENST00000308298 FAM168BA1KXE4 195 aa13□□□□□ -0.33
SSH3-202ENST00000308298 NUPR2A6NF83 97 aa13□□□□□ -0.33
SSH3-202ENST00000308298 B5MCH6 92 aa13□□□□□ -0.33
SSH3-202ENST00000308298 RBM3P98179 157 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms