RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 A0A1W2PNN7 141 aa8.39□□□□□ -1.07
PSMB4-201ENST00000290541 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
PSMB4-201ENST00000290541 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
PSMB4-201ENST00000290541 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
PSMB4-201ENST00000290541 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
PSMB4-201ENST00000290541 PFN2P35080 140 aa8.38□□□□□ -1.07
PSMB4-201ENST00000290541 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
PSMB4-201ENST00000290541 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
PSMB4-201ENST00000290541 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
PSMB4-201ENST00000290541 A0A0U1RRA0 63 aa8.37□□□□□ -1.07
PSMB4-201ENST00000290541 SCGB1D1O95968 90 aa8.37□□□□□ -1.07
PSMB4-201ENST00000290541 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
PSMB4-201ENST00000290541 KRTAP7-1Q8IUC3 87 aa8.37□□□□□ -1.07
PSMB4-201ENST00000290541 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
PSMB4-201ENST00000290541 PLAC8Q9NZF1 115 aa8.37□□□□□ -1.07
PSMB4-201ENST00000290541 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
PSMB4-201ENST00000290541 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
PSMB4-201ENST00000290541 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
PSMB4-201ENST00000290541 MYMXA0A1B0GTQ4 84 aa8.35□□□□□ -1.07
PSMB4-201ENST00000290541 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
PSMB4-201ENST00000290541 SFTA2Q6UW10 78 aa8.34□□□□□ -1.07
PSMB4-201ENST00000290541 NMUP48645 174 aa8.33□□□□□ -1.08
PSMB4-201ENST00000290541 LINC00158P58513 81 aa8.33□□□□□ -1.08
PSMB4-201ENST00000290541 HERV-K104P63124 156 aa8.33□□□□□ -1.08
PSMB4-201ENST00000290541 MEIG1Q5JSS6 88 aa8.33□□□□□ -1.08
PSMB4-201ENST00000290541 FAM19A5Q7Z5A7 132 aaPredicted RBP8.33□□□□□ -1.08
PSMB4-201ENST00000290541 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
PSMB4-201ENST00000290541 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
PSMB4-201ENST00000290541 AKR1D1P51857 326 aa8.32□□□□□ -1.08
PSMB4-201ENST00000290541 COX17Q14061 63 aa8.32□□□□□ -1.08
PSMB4-201ENST00000290541 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
PSMB4-201ENST00000290541 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
PSMB4-201ENST00000290541 CRCT1Q9UGL9 99 aa8.32□□□□□ -1.08
PSMB4-201ENST00000290541 LPAP08519 4548 aa8.32□□□□□ -1.08
PSMB4-201ENST00000290541 ZNF815PA8K554 130 aa8.31□□□□□ -1.08
PSMB4-201ENST00000290541 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
PSMB4-201ENST00000290541 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
PSMB4-201ENST00000290541 DAND5Q8N907 189 aa8.31□□□□□ -1.08
PSMB4-201ENST00000290541 Q8NDZ9 215 aa8.31□□□□□ -1.08
PSMB4-201ENST00000290541 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
PSMB4-201ENST00000290541 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
PSMB4-201ENST00000290541 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
PSMB4-201ENST00000290541 KRTAP11-1Q8IUC1 163 aa8.28□□□□□ -1.08
PSMB4-201ENST00000290541 LITAFQ99732 161 aa8.28□□□□□ -1.08
PSMB4-201ENST00000290541 TP73-AS1Q9UF72 201 aa8.28□□□□□ -1.08
PSMB4-201ENST00000290541 HSBP1L1C9JCN9 74 aa8.27□□□□□ -1.09
PSMB4-201ENST00000290541 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
PSMB4-201ENST00000290541 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
PSMB4-201ENST00000290541 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
PSMB4-201ENST00000290541 M0QXV9 152 aa8.26□□□□□ -1.09
PSMB4-201ENST00000290541 PAM16Q9Y3D7 125 aa8.26□□□□□ -1.09
PSMB4-201ENST00000290541 VPREB1P12018 145 aa8.25□□□□□ -1.09
PSMB4-201ENST00000290541 NPC2P61916 151 aa8.25□□□□□ -1.09
PSMB4-201ENST00000290541 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
PSMB4-201ENST00000290541 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
PSMB4-201ENST00000290541 PRR3P79522 188 aaKnown RBP8.24□□□□□ -1.09
PSMB4-201ENST00000290541 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
PSMB4-201ENST00000290541 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
PSMB4-201ENST00000290541 GAGE10A6NGK3 116 aa8.23□□□□□ -1.09
PSMB4-201ENST00000290541 TIMM17BO60830 172 aa8.23□□□□□ -1.09
PSMB4-201ENST00000290541 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
PSMB4-201ENST00000290541 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
PSMB4-201ENST00000290541 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
PSMB4-201ENST00000290541 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
PSMB4-201ENST00000290541 VAMP8Q9BV40 100 aa8.23□□□□□ -1.09
PSMB4-201ENST00000290541 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
PSMB4-201ENST00000290541 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
PSMB4-201ENST00000290541 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
PSMB4-201ENST00000290541 C14orf144Q96I85 54 aa8.22□□□□□ -1.09
PSMB4-201ENST00000290541 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
PSMB4-201ENST00000290541 COX8AP10176 69 aa8.21□□□□□ -1.1
PSMB4-201ENST00000290541 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
PSMB4-201ENST00000290541 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
PSMB4-201ENST00000290541 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
PSMB4-201ENST00000290541 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
PSMB4-201ENST00000290541 HNRNPA3P51991 378 aaKnown RBP8.2□□□□□ -1.1
PSMB4-201ENST00000290541 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
PSMB4-201ENST00000290541 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
PSMB4-201ENST00000290541 NCR3O14931 201 aa8.19□□□□□ -1.1
PSMB4-201ENST00000290541 UBE2BP63146 152 aa8.19□□□□□ -1.1
PSMB4-201ENST00000290541 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
PSMB4-201ENST00000290541 SPANXDQ9BXN6 97 aa8.19□□□□□ -1.1
PSMB4-201ENST00000290541 SPANXCQ9NY87 97 aa8.19□□□□□ -1.1
PSMB4-201ENST00000290541 TMEM238C9JI98 176 aa8.17□□□□□ -1.1
PSMB4-201ENST00000290541 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 M0R378 163 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 DLEU1O43261 78 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 C1orf137Q5JT78 98 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 MIEN1Q9BRT3 115 aa8.16□□□□□ -1.1
PSMB4-201ENST00000290541 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
PSMB4-201ENST00000290541 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
PSMB4-201ENST00000290541 NDUFC2O95298 119 aa8.14□□□□□ -1.11
PSMB4-201ENST00000290541 SLC25A34Q6PIV7 304 aa8.14□□□□□ -1.11
PSMB4-201ENST00000290541 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
PSMB4-201ENST00000290541 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
PSMB4-201ENST00000290541 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms