RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 C9orf129Q5T035 196 aaKnown RBP10.98□□□□□ -0.65
SMAD6-201ENST00000288840 Q6ZQY7 126 aa10.98□□□□□ -0.65
SMAD6-201ENST00000288840 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
SMAD6-201ENST00000288840 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
SMAD6-201ENST00000288840 RBM3P98179 157 aaKnown RBP10.97□□□□□ -0.65
SMAD6-201ENST00000288840 SMCR5Q8TEV8 140 aa10.97□□□□□ -0.65
SMAD6-201ENST00000288840 FAM240AA0A1B0GVK7 77 aa10.96□□□□□ -0.65
SMAD6-201ENST00000288840 hADV29S1A0JD25 119 aa10.96□□□□□ -0.65
SMAD6-201ENST00000288840 NHLRC4P0CG21 123 aaPredicted RBP10.96□□□□□ -0.65
SMAD6-201ENST00000288840 KRTAP1-1Q07627 177 aa10.96□□□□□ -0.65
SMAD6-201ENST00000288840 ENHOQ6UWT2 76 aa10.96□□□□□ -0.65
SMAD6-201ENST00000288840 KPRPQ5T749 579 aaPredicted RBP10.95□□□□□ -0.66
SMAD6-201ENST00000288840 DPH3Q96FX2 82 aa10.95□□□□□ -0.66
SMAD6-201ENST00000288840 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
SMAD6-201ENST00000288840 MIFP14174 115 aa10.95□□□□□ -0.66
SMAD6-201ENST00000288840 VWFP04275 2813 aa10.94□□□□□ -0.66
SMAD6-201ENST00000288840 BRK1Q8WUW1 75 aa10.94□□□□□ -0.66
SMAD6-201ENST00000288840 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
SMAD6-201ENST00000288840 WFDC10BQ8IUB3 73 aa10.94□□□□□ -0.66
SMAD6-201ENST00000288840 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
SMAD6-201ENST00000288840 Q6ZTC4 211 aa10.93□□□□□ -0.66
SMAD6-201ENST00000288840 Q8N814 137 aa10.93□□□□□ -0.66
SMAD6-201ENST00000288840 DIRC1Q969H9 104 aa10.93□□□□□ -0.66
SMAD6-201ENST00000288840 LELP1Q5T871 98 aa10.92□□□□□ -0.66
SMAD6-201ENST00000288840 NANOS2P60321 138 aaKnown RBP10.92□□□□□ -0.66
SMAD6-201ENST00000288840 TRBV10-3A0A0K0K1G6 114 aa10.91□□□□□ -0.66
SMAD6-201ENST00000288840 Q6Q795 121 aa10.91□□□□□ -0.66
SMAD6-201ENST00000288840 TENM4Q6N022 2769 aa10.9□□□□□ -0.66
SMAD6-201ENST00000288840 ATOX1O00244 68 aa10.9□□□□□ -0.66
SMAD6-201ENST00000288840 DEFB131BA0A096LNP1 70 aa10.89□□□□□ -0.67
SMAD6-201ENST00000288840 FAM236DA0A1B0GTK5 79 aa10.89□□□□□ -0.67
SMAD6-201ENST00000288840 GHRHP01286 108 aa10.89□□□□□ -0.67
SMAD6-201ENST00000288840 FAM236CP0DP71 79 aa10.89□□□□□ -0.67
SMAD6-201ENST00000288840 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
SMAD6-201ENST00000288840 USP17L23D6RBM5 183 aa10.87□□□□□ -0.67
SMAD6-201ENST00000288840 FAM19A1Q7Z5A9 133 aa10.87□□□□□ -0.67
SMAD6-201ENST00000288840 C3orf22Q8N5N4 141 aa10.87□□□□□ -0.67
SMAD6-201ENST00000288840 BAHCC1Q9P281 2608 aa10.87□□□□□ -0.67
SMAD6-201ENST00000288840 COX7BP24311 80 aa10.87□□□□□ -0.67
SMAD6-201ENST00000288840 C11orf45Q8TAV5 145 aa10.86□□□□□ -0.67
SMAD6-201ENST00000288840 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
SMAD6-201ENST00000288840 A0A0J9YWU9 116 aa10.86□□□□□ -0.67
SMAD6-201ENST00000288840 UQCRQO14949 82 aa10.86□□□□□ -0.67
SMAD6-201ENST00000288840 UPK3BQ9BT76 320 aa10.86□□□□□ -0.67
SMAD6-201ENST00000288840 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
SMAD6-201ENST00000288840 LYPD5Q6UWN5 251 aa10.85□□□□□ -0.67
SMAD6-201ENST00000288840 C20orf197Q8N268 126 aa10.85□□□□□ -0.67
SMAD6-201ENST00000288840 C4orf26Q17RF5 130 aa10.85□□□□□ -0.67
SMAD6-201ENST00000288840 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
SMAD6-201ENST00000288840 IMUPQ9GZP8 106 aa10.84□□□□□ -0.67
SMAD6-201ENST00000288840 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
SMAD6-201ENST00000288840 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
SMAD6-201ENST00000288840 PSCAO43653 123 aa10.83□□□□□ -0.68
SMAD6-201ENST00000288840 CCKP06307 115 aa10.83□□□□□ -0.68
SMAD6-201ENST00000288840 COX17Q14061 63 aa10.83□□□□□ -0.68
SMAD6-201ENST00000288840 Q8NAQ8 132 aa10.82□□□□□ -0.68
SMAD6-201ENST00000288840 C3orf84H3BNL1 204 aa10.81□□□□□ -0.68
SMAD6-201ENST00000288840 ZNF73O43830 326 aaPredicted RBP10.81□□□□□ -0.68
SMAD6-201ENST00000288840 IGKV2-24A0A0C4DH68 120 aa10.8□□□□□ -0.68
SMAD6-201ENST00000288840 KIAA0087Q14695 138 aa10.8□□□□□ -0.68
SMAD6-201ENST00000288840 Q6ZRU5 148 aa10.8□□□□□ -0.68
SMAD6-201ENST00000288840 COX7CP15954 63 aa10.8□□□□□ -0.68
SMAD6-201ENST00000288840 UBE2BP63146 152 aa10.79□□□□□ -0.68
SMAD6-201ENST00000288840 C6orf48Q9UBA6 75 aa10.79□□□□□ -0.68
SMAD6-201ENST00000288840 UBE2DNLQ8IWF7 75 aa10.79□□□□□ -0.68
SMAD6-201ENST00000288840 OTOGQ6ZRI0 2925 aa10.78□□□□□ -0.68
SMAD6-201ENST00000288840 LINC00575Q6W349 94 aa10.78□□□□□ -0.68
SMAD6-201ENST00000288840 F8WDY8 70 aa10.78□□□□□ -0.68
SMAD6-201ENST00000288840 SYCNQ0VAF6 134 aa10.78□□□□□ -0.68
SMAD6-201ENST00000288840 ETDCA0A1B0GVM5 59 aa10.77□□□□□ -0.69
SMAD6-201ENST00000288840 PDZD2O15018 2839 aa10.76□□□□□ -0.69
SMAD6-201ENST00000288840 Q6JHZ5 121 aa10.76□□□□□ -0.69
SMAD6-201ENST00000288840 ZNF469Q96JG9 3925 aaPredicted RBP10.76□□□□□ -0.69
SMAD6-201ENST00000288840 NDUFC2O95298 119 aa10.75□□□□□ -0.69
SMAD6-201ENST00000288840 NREPQ16612 68 aa10.75□□□□□ -0.69
SMAD6-201ENST00000288840 SNURFQ9Y675 71 aa10.75□□□□□ -0.69
SMAD6-201ENST00000288840 ESRGQ1W209 222 aa10.75□□□□□ -0.69
SMAD6-201ENST00000288840 SERP2Q8N6R1 65 aa10.74□□□□□ -0.69
SMAD6-201ENST00000288840 Q8NDZ9 215 aa10.73□□□□□ -0.69
SMAD6-201ENST00000288840 Q8N9L7 120 aa10.73□□□□□ -0.69
SMAD6-201ENST00000288840 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.72□□□□□ -0.69
SMAD6-201ENST00000288840 LINC00612Q8N6U2 182 aa10.71□□□□□ -0.7
SMAD6-201ENST00000288840 M0R378 163 aa10.7□□□□□ -0.7
SMAD6-201ENST00000288840 FBN1P35555 2871 aaKnown RBP10.7□□□□□ -0.7
SMAD6-201ENST00000288840 C22orf24Q9Y442 160 aa10.7□□□□□ -0.7
SMAD6-201ENST00000288840 A0A096LNI7 61 aa10.69□□□□□ -0.7
SMAD6-201ENST00000288840 M0R2N4 97 aa10.69□□□□□ -0.7
SMAD6-201ENST00000288840 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
SMAD6-201ENST00000288840 Q6ZVQ6 151 aa10.67□□□□□ -0.7
SMAD6-201ENST00000288840 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
SMAD6-201ENST00000288840 EGFEM1PQ0D2K5 195 aa10.67□□□□□ -0.7
SMAD6-201ENST00000288840 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.67□□□□□ -0.7
SMAD6-201ENST00000288840 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
SMAD6-201ENST00000288840 F8WEM9 126 aa10.66□□□□□ -0.7
SMAD6-201ENST00000288840 MUC7Q8TAX7 377 aa10.65□□□□□ -0.7
SMAD6-201ENST00000288840 FUSP35637 526 aaKnown RBP eCLIP10.65□□□□□ -0.71
SMAD6-201ENST00000288840 MRPL55Q7Z7F7 128 aaKnown RBP10.64□□□□□ -0.71
SMAD6-201ENST00000288840 BPY2O14599 106 aa10.64□□□□□ -0.71
SMAD6-201ENST00000288840 LINC01547P58512 204 aaPredicted RBP10.64□□□□□ -0.71
SMAD6-201ENST00000288840 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms