RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SMR3AQ99954 134 aa8.98□□□□□ -0.97
SLC28A1-201ENST00000286749 CELA1Q9UNI1 258 aa8.98□□□□□ -0.97
SLC28A1-201ENST00000286749 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
SLC28A1-201ENST00000286749 FAM19A1Q7Z5A9 133 aa8.97□□□□□ -0.97
SLC28A1-201ENST00000286749 HIVEP2P31629 2446 aa8.97□□□□□ -0.97
SLC28A1-201ENST00000286749 HTN3P15516 51 aa8.97□□□□□ -0.97
SLC28A1-201ENST00000286749 ATP5EP2Q5VTU8 51 aa8.97□□□□□ -0.97
SLC28A1-201ENST00000286749 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
SLC28A1-201ENST00000286749 OTOGQ6ZRI0 2925 aa8.96□□□□□ -0.97
SLC28A1-201ENST00000286749 CYSRT1A8MQ03 144 aa8.96□□□□□ -0.97
SLC28A1-201ENST00000286749 UBL5Q9BZL1 73 aa8.96□□□□□ -0.98
SLC28A1-201ENST00000286749 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
SLC28A1-201ENST00000286749 J3KT08 172 aa8.95□□□□□ -0.98
SLC28A1-201ENST00000286749 RBM3P98179 157 aaKnown RBP8.95□□□□□ -0.98
SLC28A1-201ENST00000286749 LYPD5Q6UWN5 251 aa8.95□□□□□ -0.98
SLC28A1-201ENST00000286749 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
SLC28A1-201ENST00000286749 C9orf66Q5T8R8 295 aa8.94□□□□□ -0.98
SLC28A1-201ENST00000286749 Q6ZQT0 140 aa8.94□□□□□ -0.98
SLC28A1-201ENST00000286749 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
SLC28A1-201ENST00000286749 KLK12Q9UKR0 248 aa8.94□□□□□ -0.98
SLC28A1-201ENST00000286749 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 GHRHP01286 108 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 IGHV4-30-4P0DP06 118 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 APOC4P55056 127 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 LELP1Q5T871 98 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 Q8NAQ8 132 aa8.93□□□□□ -0.98
SLC28A1-201ENST00000286749 M0R2N4 97 aa8.92□□□□□ -0.98
SLC28A1-201ENST00000286749 TMEM258P61165 79 aa8.92□□□□□ -0.98
SLC28A1-201ENST00000286749 Q6ZQY7 126 aa8.91□□□□□ -0.98
SLC28A1-201ENST00000286749 MUC7Q8TAX7 377 aa8.91□□□□□ -0.98
SLC28A1-201ENST00000286749 LOC110117498A0A087WWA1 95 aa8.91□□□□□ -0.98
SLC28A1-201ENST00000286749 PRR34Q9NV39 138 aa8.91□□□□□ -0.98
SLC28A1-201ENST00000286749 TENM1Q9UKZ4 2725 aa8.91□□□□□ -0.98
SLC28A1-201ENST00000286749 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
SLC28A1-201ENST00000286749 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
SLC28A1-201ENST00000286749 C6orf48Q9UBA6 75 aa8.9□□□□□ -0.98
SLC28A1-201ENST00000286749 SPART-AS1P0CW21 52 aa8.89□□□□□ -0.99
SLC28A1-201ENST00000286749 MIFP14174 115 aa8.89□□□□□ -0.99
SLC28A1-201ENST00000286749 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
SLC28A1-201ENST00000286749 RPS28P62857 69 aaKnown RBP8.88□□□□□ -0.99
SLC28A1-201ENST00000286749 DSCR8Q96T75 97 aa8.88□□□□□ -0.99
SLC28A1-201ENST00000286749 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
SLC28A1-201ENST00000286749 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
SLC28A1-201ENST00000286749 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
SLC28A1-201ENST00000286749 DIRC1Q969H9 104 aa8.87□□□□□ -0.99
SLC28A1-201ENST00000286749 MAST4O15021 2626 aa8.87□□□□□ -0.99
SLC28A1-201ENST00000286749 LINC01547P58512 204 aaPredicted RBP8.86□□□□□ -0.99
SLC28A1-201ENST00000286749 HAMPP81172 84 aa8.86□□□□□ -0.99
SLC28A1-201ENST00000286749 Q6ZVQ6 151 aa8.86□□□□□ -0.99
SLC28A1-201ENST00000286749 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
SLC28A1-201ENST00000286749 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
SLC28A1-201ENST00000286749 COX7BP24311 80 aa8.84□□□□□ -1
SLC28A1-201ENST00000286749 C20orf197Q8N268 126 aa8.84□□□□□ -1
SLC28A1-201ENST00000286749 OXTP01178 125 aa8.83□□□□□ -1
SLC28A1-201ENST00000286749 H3BQ85 93 aa8.82□□□□□ -1
SLC28A1-201ENST00000286749 PDE6GP18545 87 aa8.82□□□□□ -1
SLC28A1-201ENST00000286749 CAMK2N2Q96S95 79 aa8.82□□□□□ -1
SLC28A1-201ENST00000286749 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
SLC28A1-201ENST00000286749 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
SLC28A1-201ENST00000286749 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
SLC28A1-201ENST00000286749 ATRQ13535 2644 aa8.81□□□□□ -1
SLC28A1-201ENST00000286749 VPREB1P12018 145 aa8.81□□□□□ -1
SLC28A1-201ENST00000286749 TRBV7-4A0A0J9YYF1 115 aa8.8□□□□□ -1
SLC28A1-201ENST00000286749 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
SLC28A1-201ENST00000286749 INAFM1C9JVW0 142 aa8.8□□□□□ -1
SLC28A1-201ENST00000286749 NSD1Q96L73 2696 aaPredicted RBP8.79□□□□□ -1
SLC28A1-201ENST00000286749 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
SLC28A1-201ENST00000286749 CXCL6P80162 114 aa8.79□□□□□ -1
SLC28A1-201ENST00000286749 Q6ZRU5 148 aa8.79□□□□□ -1
SLC28A1-201ENST00000286749 SCXQ7RTU7 201 aa8.79□□□□□ -1
SLC28A1-201ENST00000286749 TEP1Q99973 2627 aaKnown RBP8.79□□□□□ -1
SLC28A1-201ENST00000286749 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
SLC28A1-201ENST00000286749 TRBV7-6A0A0J9YX20 115 aa8.77□□□□□ -1.01
SLC28A1-201ENST00000286749 EGFEM1PQ0D2K5 195 aa8.77□□□□□ -1.01
SLC28A1-201ENST00000286749 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
SLC28A1-201ENST00000286749 M0R378 163 aa8.77□□□□□ -1.01
SLC28A1-201ENST00000286749 BCE1O60756 84 aa8.77□□□□□ -1.01
SLC28A1-201ENST00000286749 KPRPQ5T749 579 aaPredicted RBP8.77□□□□□ -1.01
SLC28A1-201ENST00000286749 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
SLC28A1-201ENST00000286749 RETNQ9HD89 108 aa8.76□□□□□ -1.01
SLC28A1-201ENST00000286749 F8P00451 2351 aa8.75□□□□□ -1.01
SLC28A1-201ENST00000286749 PKD1L1Q8TDX9 2849 aa8.75□□□□□ -1.01
SLC28A1-201ENST00000286749 TRRAPQ9Y4A5 3859 aa8.75□□□□□ -1.01
SLC28A1-201ENST00000286749 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
SLC28A1-201ENST00000286749 FAM236DA0A1B0GTK5 79 aa8.73□□□□□ -1.01
SLC28A1-201ENST00000286749 FAM236CP0DP71 79 aa8.73□□□□□ -1.01
SLC28A1-201ENST00000286749 H7BZZ5 65 aa8.73□□□□□ -1.01
SLC28A1-201ENST00000286749 SNURFQ9Y675 71 aa8.73□□□□□ -1.01
SLC28A1-201ENST00000286749 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
SLC28A1-201ENST00000286749 Q6ZRP5 223 aa8.72□□□□□ -1.01
SLC28A1-201ENST00000286749 Q6ZTC4 211 aa8.72□□□□□ -1.01
SLC28A1-201ENST00000286749 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
SLC28A1-201ENST00000286749 H3BNG1 76 aa8.7□□□□□ -1.02
SLC28A1-201ENST00000286749 ESRGQ1W209 222 aa8.7□□□□□ -1.02
SLC28A1-201ENST00000286749 RMI2Q96E14 147 aa8.7□□□□□ -1.02
SLC28A1-201ENST00000286749 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
SLC28A1-201ENST00000286749 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
SLC28A1-201ENST00000286749 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
SLC28A1-201ENST00000286749 WIPF1O43516 503 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms