RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 C6orf48Q9UBA6 75 aa15.42■□□□□ 0.06
RAB40B-201ENST00000269347 C15orf56Q8N910 161 aa15.41■□□□□ 0.06
RAB40B-201ENST00000269347 PRKDCP78527 4128 aaKnown RBP15.4■□□□□ 0.06
RAB40B-201ENST00000269347 COX17Q14061 63 aa15.39■□□□□ 0.05
RAB40B-201ENST00000269347 DYNC2H1Q8NCM8 4307 aaKnown RBP15.39■□□□□ 0.05
RAB40B-201ENST00000269347 OR13C6PQ8NH95 151 aa15.38■□□□□ 0.05
RAB40B-201ENST00000269347 PLECQ15149 4684 aaKnown RBP15.36■□□□□ 0.05
RAB40B-201ENST00000269347 A0A087WYN8 130 aa15.35■□□□□ 0.05
RAB40B-201ENST00000269347 BAALC-AS2P0C853 105 aa15.35■□□□□ 0.05
RAB40B-201ENST00000269347 DNAH10OSP0CZ25 163 aa15.35■□□□□ 0.05
RAB40B-201ENST00000269347 Q9HAA7 133 aa15.35■□□□□ 0.05
RAB40B-201ENST00000269347 C22orf24Q9Y442 160 aa15.35■□□□□ 0.05
RAB40B-201ENST00000269347 NCR3O14931 201 aa15.34■□□□□ 0.05
RAB40B-201ENST00000269347 IGKV2D-24A0A075B6R9 120 aa15.34■□□□□ 0.05
RAB40B-201ENST00000269347 SNCGO76070 127 aa15.33■□□□□ 0.04
RAB40B-201ENST00000269347 CASC10Q5T4H9 136 aa15.33■□□□□ 0.04
RAB40B-201ENST00000269347 TENM2Q9NT68 2774 aa15.32■□□□□ 0.04
RAB40B-201ENST00000269347 Q6ZRU5 148 aa15.32■□□□□ 0.04
RAB40B-201ENST00000269347 FAM240AA0A1B0GVK7 77 aa15.31■□□□□ 0.04
RAB40B-201ENST00000269347 C15orf53Q8NAA6 179 aa15.31■□□□□ 0.04
RAB40B-201ENST00000269347 C1orf43Q9BWL3 253 aa15.31■□□□□ 0.04
RAB40B-201ENST00000269347 XAGE1AQ9HD64 81 aa15.31■□□□□ 0.04
RAB40B-201ENST00000269347 GVQW2A0A096LPI5 108 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-201ENST00000269347 A0A1B0GV72 72 aa15.31■□□□□ 0.04
RAB40B-201ENST00000269347 H0YGX0 51 aa15.3■□□□□ 0.04
RAB40B-201ENST00000269347 NDUFC2O95298 119 aa15.29■□□□□ 0.04
RAB40B-201ENST00000269347 ZNF561-AS1K7EIQ3 104 aa15.28■□□□□ 0.04
RAB40B-201ENST00000269347 DNAL4O96015 105 aa15.28■□□□□ 0.04
RAB40B-201ENST00000269347 CAMK2N2Q96S95 79 aa15.28■□□□□ 0.04
RAB40B-201ENST00000269347 STARD9Q9P2P6 4700 aa15.24■□□□□ 0.03
RAB40B-201ENST00000269347 GAGE2BQ13066 116 aa15.24■□□□□ 0.03
RAB40B-201ENST00000269347 GAGE2EQ4V326 116 aa15.24■□□□□ 0.03
RAB40B-201ENST00000269347 GAGE2DQ9UEU5 116 aa15.24■□□□□ 0.03
RAB40B-201ENST00000269347 SLPIP03973 132 aa15.22■□□□□ 0.03
RAB40B-201ENST00000269347 TTC32Q5I0X7 151 aa15.22■□□□□ 0.03
RAB40B-201ENST00000269347 C9orf129Q5T035 196 aaKnown RBP15.22■□□□□ 0.03
RAB40B-201ENST00000269347 LECT2O14960 151 aa15.22■□□□□ 0.03
RAB40B-201ENST00000269347 ACYP1P07311 99 aa15.22■□□□□ 0.03
RAB40B-201ENST00000269347 RPL18AQ02543 176 aaKnown RBP15.22■□□□□ 0.03
RAB40B-201ENST00000269347 KRTAP1-5Q9BYS1 174 aa15.21■□□□□ 0.02
RAB40B-201ENST00000269347 INAFM2P0DMQ5 153 aa15.19■□□□□ 0.02
RAB40B-201ENST00000269347 TMEM126AQ9H061 195 aa15.19■□□□□ 0.02
RAB40B-201ENST00000269347 Q6ZRP5 223 aa15.18■□□□□ 0.02
RAB40B-201ENST00000269347 B9D2Q9BPU9 175 aa15.18■□□□□ 0.02
RAB40B-201ENST00000269347 MEGF8Q7Z7M0 2845 aa15.18■□□□□ 0.02
RAB40B-201ENST00000269347 Q6Q795 121 aa15.18■□□□□ 0.02
RAB40B-201ENST00000269347 C2orf48Q96LS8 159 aa15.18■□□□□ 0.02
RAB40B-201ENST00000269347 C6orf99Q4VX62 202 aa15.17■□□□□ 0.02
RAB40B-201ENST00000269347 UPK3BQ9BT76 320 aa15.17■□□□□ 0.02
RAB40B-201ENST00000269347 IGLV6-57P01721 117 aa15.15■□□□□ 0.02
RAB40B-201ENST00000269347 MUC7Q8TAX7 377 aa15.15■□□□□ 0.02
RAB40B-201ENST00000269347 S100A7L2Q5SY68 101 aa15.14■□□□□ 0.01
RAB40B-201ENST00000269347 TRBV10-3A0A0K0K1G6 114 aa15.14■□□□□ 0.01
RAB40B-201ENST00000269347 VPREB1P12018 145 aa15.14■□□□□ 0.01
RAB40B-201ENST00000269347 ANAPC13Q9BS18 74 aa15.14■□□□□ 0.01
RAB40B-201ENST00000269347 USP17L23D6RBM5 183 aa15.13■□□□□ 0.01
RAB40B-201ENST00000269347 NDUFC2-KCTD14E9PQ53 114 aa15.13■□□□□ 0.01
RAB40B-201ENST00000269347 APLNQ9ULZ1 77 aa15.13■□□□□ 0.01
RAB40B-201ENST00000269347 SYCNQ0VAF6 134 aa15.12■□□□□ 0.01
RAB40B-201ENST00000269347 GAGE2AQ6NT46 116 aa15.11■□□□□ 0.01
RAB40B-201ENST00000269347 ORMDL1Q9P0S3 153 aa15.11■□□□□ 0.01
RAB40B-201ENST00000269347 NDUFV3P56181 108 aaKnown RBP15.09■□□□□ 0.01
RAB40B-201ENST00000269347 A0A1B0GX51 115 aa15.08■□□□□ 0.01
RAB40B-201ENST00000269347 SMCR5Q8TEV8 140 aa15.08■□□□□ 0.01
RAB40B-201ENST00000269347 Q8N814 137 aa15.08■□□□□ 0
RAB40B-201ENST00000269347 OBSCN-AS1Q96MR7 158 aa15.07■□□□□ 0
RAB40B-201ENST00000269347 C14orf132Q9NPU4 83 aa15.07■□□□□ 0
RAB40B-201ENST00000269347 TRBV7-7A0A0K0K1E9 115 aa15.07■□□□□ 0
RAB40B-201ENST00000269347 LINC00167Q96N53 147 aa15.07■□□□□ 0
RAB40B-201ENST00000269347 LINC00643Q86TS7 51 aa15.05■□□□□ 0
RAB40B-201ENST00000269347 VPS13DQ5THJ4 4388 aa15.05■□□□□ 0
RAB40B-201ENST00000269347 SERTAD4-AS1Q5TG53 156 aa15.05■□□□□ -0
RAB40B-201ENST00000269347 SDIM1Q6ZPB5 146 aa15.04■□□□□ -0
RAB40B-201ENST00000269347 LINC00575Q6W349 94 aa15.03■□□□□ -0
RAB40B-201ENST00000269347 NHLRC4P0CG21 123 aaPredicted RBP15.02□□□□□ -0.01
RAB40B-201ENST00000269347 TRAV23DV6A0A075B6W5 121 aa15.01□□□□□ -0.01
RAB40B-201ENST00000269347 FAM168BA1KXE4 195 aa15.01□□□□□ -0.01
RAB40B-201ENST00000269347 KRTAP7-1Q8IUC3 87 aa15.01□□□□□ -0.01
RAB40B-201ENST00000269347 IMUPQ9GZP8 106 aa14.99□□□□□ -0.01
RAB40B-201ENST00000269347 F8WDY8 70 aa14.98□□□□□ -0.01
RAB40B-201ENST00000269347 KMT2AQ03164 3969 aa14.97□□□□□ -0.01
RAB40B-201ENST00000269347 TMEM256-PLSCR3K7ERE1 68 aa14.97□□□□□ -0.01
RAB40B-201ENST00000269347 ZNF73O43830 326 aaPredicted RBP14.97□□□□□ -0.01
RAB40B-201ENST00000269347 M0R378 163 aa14.96□□□□□ -0.01
RAB40B-201ENST00000269347 UBE2DNLQ8IWF7 75 aa14.96□□□□□ -0.01
RAB40B-201ENST00000269347 TLX1NBP0CAT3 122 aa14.95□□□□□ -0.02
RAB40B-201ENST00000269347 RMI2Q96E14 147 aa14.95□□□□□ -0.02
RAB40B-201ENST00000269347 JMJD7-PLA2G4BH0Y9G9 81 aa14.94□□□□□ -0.02
RAB40B-201ENST00000269347 hADV29S1A0JD25 119 aa14.93□□□□□ -0.02
RAB40B-201ENST00000269347 DIRC1Q969H9 104 aa14.93□□□□□ -0.02
RAB40B-201ENST00000269347 C7orf33Q8WU49 177 aa14.92□□□□□ -0.02
RAB40B-201ENST00000269347 DNAH2Q9P225 4427 aa14.9□□□□□ -0.02
RAB40B-201ENST00000269347 ELOF1P60002 83 aaKnown RBP14.9□□□□□ -0.02
RAB40B-201ENST00000269347 LINC00846Q9NV44 126 aa14.9□□□□□ -0.02
RAB40B-201ENST00000269347 CCKP06307 115 aa14.89□□□□□ -0.03
RAB40B-201ENST00000269347 Q6ZQY7 126 aa14.89□□□□□ -0.03
RAB40B-201ENST00000269347 FAM236AA0A1B0GUQ0 79 aa14.88□□□□□ -0.03
RAB40B-201ENST00000269347 FAM236BA0A1B0GV22 79 aa14.88□□□□□ -0.03
RAB40B-201ENST00000269347 COX7BP24311 80 aa14.87□□□□□ -0.03
RAB40B-201ENST00000269347 RPL37AP8A6NKH3 93 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms