RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 KLK5Q9Y337 293 aaPredicted RBP8.73□□□□□ -1.01
CPSF6-201ENST00000266679 INAFM2P0DMQ5 153 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
CPSF6-201ENST00000266679 Q6Q795 121 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 Q8NDZ9 215 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 PRR34Q9NV39 138 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 NDUFC2O95298 119 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 GAGE2AQ6NT46 116 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
CPSF6-201ENST00000266679 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
CPSF6-201ENST00000266679 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
CPSF6-201ENST00000266679 Q6ZTC4 211 aa8.69□□□□□ -1.02
CPSF6-201ENST00000266679 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
CPSF6-201ENST00000266679 K7EIL1 84 aa8.69□□□□□ -1.02
CPSF6-201ENST00000266679 TMEM126AQ9H061 195 aa8.69□□□□□ -1.02
CPSF6-201ENST00000266679 ORMDL1Q9P0S3 153 aa8.68□□□□□ -1.02
CPSF6-201ENST00000266679 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
CPSF6-201ENST00000266679 S100A7L2Q5SY68 101 aa8.68□□□□□ -1.02
CPSF6-201ENST00000266679 KMT2CQ8NEZ4 4911 aaKnown RBP8.68□□□□□ -1.02
CPSF6-201ENST00000266679 TRBV7-7A0A0K0K1E9 115 aa8.67□□□□□ -1.02
CPSF6-201ENST00000266679 C6orf99Q4VX62 202 aa8.66□□□□□ -1.02
CPSF6-201ENST00000266679 A0A0J9YWU9 116 aa8.65□□□□□ -1.02
CPSF6-201ENST00000266679 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
CPSF6-201ENST00000266679 Q8N814 137 aa8.65□□□□□ -1.02
CPSF6-201ENST00000266679 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
CPSF6-201ENST00000266679 C6orf48Q9UBA6 75 aa8.65□□□□□ -1.02
CPSF6-201ENST00000266679 TENM3Q9P273 2699 aa8.65□□□□□ -1.02
CPSF6-201ENST00000266679 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.03
CPSF6-201ENST00000266679 LINC00167Q96N53 147 aa8.65□□□□□ -1.03
CPSF6-201ENST00000266679 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
CPSF6-201ENST00000266679 EGFEM1PQ0D2K5 195 aa8.64□□□□□ -1.03
CPSF6-201ENST00000266679 H3BNG1 76 aa8.64□□□□□ -1.03
CPSF6-201ENST00000266679 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
CPSF6-201ENST00000266679 A0A1B0GX51 115 aa8.63□□□□□ -1.03
CPSF6-201ENST00000266679 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
CPSF6-201ENST00000266679 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
CPSF6-201ENST00000266679 ESRGQ1W209 222 aa8.62□□□□□ -1.03
CPSF6-201ENST00000266679 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
CPSF6-201ENST00000266679 STAB2Q8WWQ8 2551 aa8.62□□□□□ -1.03
CPSF6-201ENST00000266679 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
CPSF6-201ENST00000266679 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
CPSF6-201ENST00000266679 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
CPSF6-201ENST00000266679 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
CPSF6-201ENST00000266679 FAM236AA0A1B0GUQ0 79 aa8.6□□□□□ -1.03
CPSF6-201ENST00000266679 FAM236BA0A1B0GV22 79 aa8.6□□□□□ -1.03
CPSF6-201ENST00000266679 DEFB131BA0A096LNP1 70 aa8.6□□□□□ -1.03
CPSF6-201ENST00000266679 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
CPSF6-201ENST00000266679 LINC00575Q6W349 94 aa8.6□□□□□ -1.03
CPSF6-201ENST00000266679 RYR3Q15413 4870 aa8.59□□□□□ -1.03
CPSF6-201ENST00000266679 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
CPSF6-201ENST00000266679 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
CPSF6-201ENST00000266679 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
CPSF6-201ENST00000266679 C15orf56Q8N910 161 aa8.58□□□□□ -1.04
CPSF6-201ENST00000266679 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
CPSF6-201ENST00000266679 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
CPSF6-201ENST00000266679 TMEM256-PLSCR3K7ERE1 68 aa8.58□□□□□ -1.04
CPSF6-201ENST00000266679 DNAH7Q8WXX0 4024 aa8.58□□□□□ -1.04
CPSF6-201ENST00000266679 Q6ZRU5 148 aa8.57□□□□□ -1.04
CPSF6-201ENST00000266679 hADV29S1A0JD25 119 aa8.57□□□□□ -1.04
CPSF6-201ENST00000266679 C1orf43Q9BWL3 253 aa8.57□□□□□ -1.04
CPSF6-201ENST00000266679 TRAV23DV6A0A075B6W5 121 aa8.56□□□□□ -1.04
CPSF6-201ENST00000266679 JMJD7-PLA2G4BH0Y9G9 81 aa8.56□□□□□ -1.04
CPSF6-201ENST00000266679 CCKP06307 115 aa8.56□□□□□ -1.04
CPSF6-201ENST00000266679 IGKV2D-24A0A075B6R9 120 aa8.56□□□□□ -1.04
CPSF6-201ENST00000266679 IGKV3D-7A0A0C4DH55 119 aa8.56□□□□□ -1.04
CPSF6-201ENST00000266679 B5MCH6 92 aa8.56□□□□□ -1.04
CPSF6-201ENST00000266679 B9D2Q9BPU9 175 aa8.55□□□□□ -1.04
CPSF6-201ENST00000266679 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
CPSF6-201ENST00000266679 DIRC1Q969H9 104 aa8.54□□□□□ -1.04
CPSF6-201ENST00000266679 VPREB1P12018 145 aa8.53□□□□□ -1.04
CPSF6-201ENST00000266679 Q6JHZ5 121 aa8.53□□□□□ -1.04
CPSF6-201ENST00000266679 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
CPSF6-201ENST00000266679 Q6ZQY7 126 aa8.52□□□□□ -1.05
CPSF6-201ENST00000266679 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.05
CPSF6-201ENST00000266679 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
CPSF6-201ENST00000266679 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
CPSF6-201ENST00000266679 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
CPSF6-201ENST00000266679 LAMTOR3Q9UHA4 124 aa8.51□□□□□ -1.05
CPSF6-201ENST00000266679 COX7BP24311 80 aa8.5□□□□□ -1.05
CPSF6-201ENST00000266679 M0R378 163 aa8.49□□□□□ -1.05
CPSF6-201ENST00000266679 Q6ZRP5 223 aa8.49□□□□□ -1.05
CPSF6-201ENST00000266679 STARD9Q9P2P6 4700 aa8.49□□□□□ -1.05
CPSF6-201ENST00000266679 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
CPSF6-201ENST00000266679 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
CPSF6-201ENST00000266679 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
CPSF6-201ENST00000266679 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
CPSF6-201ENST00000266679 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
CPSF6-201ENST00000266679 A0A087WVE0 104 aa8.47□□□□□ -1.05
CPSF6-201ENST00000266679 Q6ZQT0 140 aa8.47□□□□□ -1.05
CPSF6-201ENST00000266679 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
CPSF6-201ENST00000266679 LYSTQ99698 3801 aa8.46□□□□□ -1.05
CPSF6-201ENST00000266679 LINC00588Q9Y4M8 146 aa8.46□□□□□ -1.05
CPSF6-201ENST00000266679 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.06
CPSF6-201ENST00000266679 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
CPSF6-201ENST00000266679 TENM2Q9NT68 2774 aa8.45□□□□□ -1.06
CPSF6-201ENST00000266679 LOC110117498A0A087WWA1 95 aa8.45□□□□□ -1.06
CPSF6-201ENST00000266679 TRBV7-6A0A0J9YX20 115 aa8.44□□□□□ -1.06
CPSF6-201ENST00000266679 F8WDY8 70 aa8.44□□□□□ -1.06
CPSF6-201ENST00000266679 M0R2N4 97 aa8.44□□□□□ -1.06
CPSF6-201ENST00000266679 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms