RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 DAND5Q8N907 189 aa4.51□□□□□ -1.69
DEPDC1B-201ENST00000265036 NDUFA12Q9UI09 145 aa4.51□□□□□ -1.69
DEPDC1B-201ENST00000265036 UBE2BP63146 152 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 HIST3H2BBQ8N257 126 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 TTTY13Q9BZ97 58 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 S100A2P29034 98 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 LINC00158P58513 81 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 SNRPEP62304 92 aaKnown RBP4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 HIST1H2BLQ99880 126 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
DEPDC1B-201ENST00000265036 J3QQQ9 107 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 HERVK_113P61574 105 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 Q8NDZ9 215 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 SND1-IT1Q9HBX3 110 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 PET117Q6UWS5 81 aa4.49□□□□□ -1.69
DEPDC1B-201ENST00000265036 LEPROTO15243 131 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 NPC2P61916 151 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 C1orf137Q5JT78 98 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 A0A1B0GV90 55 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
DEPDC1B-201ENST00000265036 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
DEPDC1B-201ENST00000265036 NKAPP1Q8N9T2 125 aa4.47□□□□□ -1.69
DEPDC1B-201ENST00000265036 C20orf202A1L168 122 aa4.47□□□□□ -1.69
DEPDC1B-201ENST00000265036 E9PLD3 99 aa4.47□□□□□ -1.69
DEPDC1B-201ENST00000265036 MRPL55Q7Z7F7 128 aaKnown RBP4.47□□□□□ -1.69
DEPDC1B-201ENST00000265036 NMUP48645 174 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 CBY1Q9Y3M2 126 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 NCR3O14931 201 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 COX17Q14061 63 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 SFTA2Q6UW10 78 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 BOD1L2Q8IYS8 172 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 LINC00167Q96N53 147 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
DEPDC1B-201ENST00000265036 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
DEPDC1B-201ENST00000265036 EIF4EBP3O60516 100 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1B-201ENST00000265036 VPREB1P12018 145 aa4.45□□□□□ -1.7
DEPDC1B-201ENST00000265036 HERV-K104P63124 156 aa4.45□□□□□ -1.7
DEPDC1B-201ENST00000265036 A0A0J9YXY3 114 aa4.45□□□□□ -1.7
DEPDC1B-201ENST00000265036 A6NJY4 79 aa4.45□□□□□ -1.7
DEPDC1B-201ENST00000265036 TNXBP22105 4242 aa4.44□□□□□ -1.7
DEPDC1B-201ENST00000265036 C5orf52A6NGY3 159 aa4.44□□□□□ -1.7
DEPDC1B-201ENST00000265036 ADAMTSL4-AS1Q5T5F5 129 aa4.44□□□□□ -1.7
DEPDC1B-201ENST00000265036 PCP2Q8IVA1 136 aa4.44□□□□□ -1.7
DEPDC1B-201ENST00000265036 TMEM238C9JI98 176 aa4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 J3QL48 77 aa4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 LBHQ53QV2 105 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 SOSTDC1Q6X4U4 206 aa4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 MIEN1Q9BRT3 115 aa4.43□□□□□ -1.7
DEPDC1B-201ENST00000265036 RPL24P83731 157 aaKnown RBP4.42□□□□□ -1.7
DEPDC1B-201ENST00000265036 SCGB1D4Q6XE38 83 aa4.42□□□□□ -1.7
DEPDC1B-201ENST00000265036 PLA2G2DQ9UNK4 145 aa4.42□□□□□ -1.7
DEPDC1B-201ENST00000265036 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
DEPDC1B-201ENST00000265036 PRLHP81277 87 aa4.41□□□□□ -1.7
DEPDC1B-201ENST00000265036 LITAFQ99732 161 aa4.41□□□□□ -1.7
DEPDC1B-201ENST00000265036 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.7
DEPDC1B-201ENST00000265036 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.71
DEPDC1B-201ENST00000265036 SPINK6Q6UWN8 80 aa4.4□□□□□ -1.71
DEPDC1B-201ENST00000265036 TMEM126AQ9H061 195 aa4.4□□□□□ -1.71
DEPDC1B-201ENST00000265036 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
DEPDC1B-201ENST00000265036 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
DEPDC1B-201ENST00000265036 M0R378 163 aa4.39□□□□□ -1.71
DEPDC1B-201ENST00000265036 BCE1O60756 84 aa4.39□□□□□ -1.71
DEPDC1B-201ENST00000265036 UBE2AP49459 152 aa4.39□□□□□ -1.71
DEPDC1B-201ENST00000265036 FAM19A1Q7Z5A9 133 aa4.39□□□□□ -1.71
DEPDC1B-201ENST00000265036 KRTAP29-1A8MX34 341 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 REG3GQ6UW15 175 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 LINC00308Q8TCZ7 52 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 H0Y9J4 135 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 ZNF861PO60384 105 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 SMIM6P0DI80 62 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 DIRC1Q969H9 104 aa4.38□□□□□ -1.71
DEPDC1B-201ENST00000265036 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
DEPDC1B-201ENST00000265036 C14orf144Q96I85 54 aa4.37□□□□□ -1.71
DEPDC1B-201ENST00000265036 HIGD2AQ9BW72 106 aa4.37□□□□□ -1.71
DEPDC1B-201ENST00000265036 DDTP30046 118 aa4.37□□□□□ -1.71
DEPDC1B-201ENST00000265036 SPANXB1Q9NS25 103 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1B-201ENST00000265036 ANAPC11Q9NYG5 84 aa4.37□□□□□ -1.71
DEPDC1B-201ENST00000265036 OXTP01178 125 aa4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 RPL28P46779 137 aaKnown RBP4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 S100A7L2Q5SY68 101 aa4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 TIMM17BO60830 172 aa4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 SPANXCQ9NY87 97 aa4.36□□□□□ -1.71
DEPDC1B-201ENST00000265036 LOC107984156A0A0G2JMH3 177 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms