RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 Q8N814 137 aa12.93□□□□□ -0.34
LPCAT3-201ENST00000261407 ORMDL1Q9P0S3 153 aa12.93□□□□□ -0.34
LPCAT3-201ENST00000261407 KPRPQ5T749 579 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-201ENST00000261407 LINC00643Q86TS7 51 aa12.92□□□□□ -0.34
LPCAT3-201ENST00000261407 S100A7L2Q5SY68 101 aa12.91□□□□□ -0.34
LPCAT3-201ENST00000261407 A0A0J9YWU9 116 aa12.9□□□□□ -0.34
LPCAT3-201ENST00000261407 B5MCH6 92 aa12.9□□□□□ -0.34
LPCAT3-201ENST00000261407 XAGE1AQ9HD64 81 aa12.9□□□□□ -0.34
LPCAT3-201ENST00000261407 C6orf48Q9UBA6 75 aa12.9□□□□□ -0.35
LPCAT3-201ENST00000261407 FAM236AA0A1B0GUQ0 79 aa12.89□□□□□ -0.35
LPCAT3-201ENST00000261407 FAM236BA0A1B0GV22 79 aa12.89□□□□□ -0.35
LPCAT3-201ENST00000261407 RPL18AQ02543 176 aaKnown RBP12.89□□□□□ -0.35
LPCAT3-201ENST00000261407 HIGD2BQ4VC39 106 aa12.89□□□□□ -0.35
LPCAT3-201ENST00000261407 NOTCH1P46531 2555 aa12.89□□□□□ -0.35
LPCAT3-201ENST00000261407 LINC00167Q96N53 147 aa12.88□□□□□ -0.35
LPCAT3-201ENST00000261407 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
LPCAT3-201ENST00000261407 MAST4O15021 2626 aa12.88□□□□□ -0.35
LPCAT3-201ENST00000261407 KRTAP24-1Q3LI83 254 aa12.87□□□□□ -0.35
LPCAT3-201ENST00000261407 ESRGQ1W209 222 aa12.85□□□□□ -0.35
LPCAT3-201ENST00000261407 KRTAP26-1Q6PEX3 210 aa12.83□□□□□ -0.35
LPCAT3-201ENST00000261407 IMUPQ9GZP8 106 aa12.83□□□□□ -0.35
LPCAT3-201ENST00000261407 LINC00575Q6W349 94 aa12.82□□□□□ -0.36
LPCAT3-201ENST00000261407 SS18L2Q9UHA2 77 aa12.82□□□□□ -0.36
LPCAT3-201ENST00000261407 IGKV3D-7A0A0C4DH55 119 aa12.82□□□□□ -0.36
LPCAT3-201ENST00000261407 IGLV6-57P01721 117 aa12.82□□□□□ -0.36
LPCAT3-201ENST00000261407 A0A1B0GX51 115 aa12.81□□□□□ -0.36
LPCAT3-201ENST00000261407 DNAH3Q8TD57 4116 aa12.81□□□□□ -0.36
LPCAT3-201ENST00000261407 TRBV10-3A0A0K0K1G6 114 aa12.81□□□□□ -0.36
LPCAT3-201ENST00000261407 GVQW2A0A096LPI5 108 aaPredicted RBP12.8□□□□□ -0.36
LPCAT3-201ENST00000261407 TMEM256-PLSCR3K7ERE1 68 aa12.8□□□□□ -0.36
LPCAT3-201ENST00000261407 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
LPCAT3-201ENST00000261407 EGFEM1PQ0D2K5 195 aa12.79□□□□□ -0.36
LPCAT3-201ENST00000261407 CAMK2N2Q96S95 79 aa12.79□□□□□ -0.36
LPCAT3-201ENST00000261407 H3BNG1 76 aa12.78□□□□□ -0.36
LPCAT3-201ENST00000261407 CCKP06307 115 aa12.78□□□□□ -0.36
LPCAT3-201ENST00000261407 Q6ZRU5 148 aa12.78□□□□□ -0.36
LPCAT3-201ENST00000261407 C15orf56Q8N910 161 aa12.78□□□□□ -0.36
LPCAT3-201ENST00000261407 hADV29S1A0JD25 119 aa12.77□□□□□ -0.36
LPCAT3-201ENST00000261407 C3orf56Q8N813 242 aa12.77□□□□□ -0.36
LPCAT3-201ENST00000261407 DEFB131BA0A096LNP1 70 aa12.76□□□□□ -0.37
LPCAT3-201ENST00000261407 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
LPCAT3-201ENST00000261407 MUC7Q8TAX7 377 aa12.75□□□□□ -0.37
LPCAT3-201ENST00000261407 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
LPCAT3-201ENST00000261407 A0A087WVE0 104 aa12.74□□□□□ -0.37
LPCAT3-201ENST00000261407 JMJD7-PLA2G4BH0Y9G9 81 aa12.74□□□□□ -0.37
LPCAT3-201ENST00000261407 COL6A5A8TX70 2615 aa12.74□□□□□ -0.37
LPCAT3-201ENST00000261407 TRAV23DV6A0A075B6W5 121 aa12.73□□□□□ -0.37
LPCAT3-201ENST00000261407 Q6ZQY7 126 aa12.73□□□□□ -0.37
LPCAT3-201ENST00000261407 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
LPCAT3-201ENST00000261407 IGKV2D-24A0A075B6R9 120 aa12.72□□□□□ -0.37
LPCAT3-201ENST00000261407 VPREB1P12018 145 aa12.71□□□□□ -0.37
LPCAT3-201ENST00000261407 M0R2N4 97 aa12.71□□□□□ -0.38
LPCAT3-201ENST00000261407 Q6JHZ5 121 aa12.7□□□□□ -0.38
LPCAT3-201ENST00000261407 C1orf43Q9BWL3 253 aa12.7□□□□□ -0.38
LPCAT3-201ENST00000261407 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
LPCAT3-201ENST00000261407 LAMTOR3Q9UHA4 124 aa12.69□□□□□ -0.38
LPCAT3-201ENST00000261407 Q6ZRP5 223 aa12.69□□□□□ -0.38
LPCAT3-201ENST00000261407 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
LPCAT3-201ENST00000261407 LINC01556Q5JQF7 62 aa12.67□□□□□ -0.38
LPCAT3-201ENST00000261407 HUWE1Q7Z6Z7 4374 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-201ENST00000261407 NDUFC2-KCTD14E9PQ53 114 aa12.67□□□□□ -0.38
LPCAT3-201ENST00000261407 HIST1H4AP62805 103 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-201ENST00000261407 RBM3P98179 157 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-201ENST00000261407 LYSTQ99698 3801 aa12.65□□□□□ -0.38
LPCAT3-201ENST00000261407 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.38
LPCAT3-201ENST00000261407 Q6ZQT0 140 aa12.65□□□□□ -0.38
LPCAT3-201ENST00000261407 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
LPCAT3-201ENST00000261407 C2orf48Q96LS8 159 aa12.63□□□□□ -0.39
LPCAT3-201ENST00000261407 COX7BP24311 80 aa12.63□□□□□ -0.39
LPCAT3-201ENST00000261407 ELOF1P60002 83 aaKnown RBP12.63□□□□□ -0.39
LPCAT3-201ENST00000261407 MRAPQ8TCY5 172 aa12.62□□□□□ -0.39
LPCAT3-201ENST00000261407 CASC10Q5T4H9 136 aa12.62□□□□□ -0.39
LPCAT3-201ENST00000261407 M0R378 163 aa12.61□□□□□ -0.39
LPCAT3-201ENST00000261407 C3orf22Q8N5N4 141 aa12.61□□□□□ -0.39
LPCAT3-201ENST00000261407 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
LPCAT3-201ENST00000261407 FAM19A1Q7Z5A9 133 aa12.6□□□□□ -0.39
LPCAT3-201ENST00000261407 LINC00588Q9Y4M8 146 aa12.59□□□□□ -0.39
LPCAT3-201ENST00000261407 DNAH10OSP0CZ25 163 aa12.58□□□□□ -0.4
LPCAT3-201ENST00000261407 SERTAD4-AS1Q5TG53 156 aa12.58□□□□□ -0.4
LPCAT3-201ENST00000261407 C9orf153Q5TBE3 101 aa12.58□□□□□ -0.4
LPCAT3-201ENST00000261407 LOC110117498A0A087WWA1 95 aa12.57□□□□□ -0.4
LPCAT3-201ENST00000261407 UQCRQO14949 82 aa12.57□□□□□ -0.4
LPCAT3-201ENST00000261407 DSCR8Q96T75 97 aa12.57□□□□□ -0.4
LPCAT3-201ENST00000261407 ATOX1O00244 68 aa12.56□□□□□ -0.4
LPCAT3-201ENST00000261407 UBL5Q9BZL1 73 aa12.56□□□□□ -0.4
LPCAT3-201ENST00000261407 DNAH10Q8IVF4 4471 aa12.56□□□□□ -0.4
LPCAT3-201ENST00000261407 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
LPCAT3-201ENST00000261407 COX7CP15954 63 aa12.55□□□□□ -0.4
LPCAT3-201ENST00000261407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.55□□□□□ -0.4
LPCAT3-201ENST00000261407 LINC00528Q8N1L1 170 aa12.55□□□□□ -0.4
LPCAT3-201ENST00000261407 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
LPCAT3-201ENST00000261407 CYSTM1Q9H1C7 97 aa12.53□□□□□ -0.4
LPCAT3-201ENST00000261407 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
LPCAT3-201ENST00000261407 TRAV10A0A0B4J240 114 aa12.52□□□□□ -0.41
LPCAT3-201ENST00000261407 TRBV7-6A0A0J9YX20 115 aa12.51□□□□□ -0.41
LPCAT3-201ENST00000261407 C7orf33Q8WU49 177 aa12.51□□□□□ -0.41
LPCAT3-201ENST00000261407 COL7A1Q02388 2944 aa12.51□□□□□ -0.41
LPCAT3-201ENST00000261407 K7EIL1 84 aa12.5□□□□□ -0.41
LPCAT3-201ENST00000261407 Q6ZVQ6 151 aa12.5□□□□□ -0.41
LPCAT3-201ENST00000261407 TRBV7-4A0A0J9YYF1 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms