RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 Q9HAA7 133 aa12.26□□□□□ -0.45
HOXC11-201ENST00000243082 C2orf48Q96LS8 159 aa12.25□□□□□ -0.45
HOXC11-201ENST00000243082 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
HOXC11-201ENST00000243082 A0A087WYN8 130 aa12.24□□□□□ -0.45
HOXC11-201ENST00000243082 NCR3O14931 201 aa12.24□□□□□ -0.45
HOXC11-201ENST00000243082 Q6ZRU5 148 aa12.24□□□□□ -0.45
HOXC11-201ENST00000243082 B9D2Q9BPU9 175 aa12.23□□□□□ -0.45
HOXC11-201ENST00000243082 UPK3BQ9BT76 320 aa12.22□□□□□ -0.45
HOXC11-201ENST00000243082 STAB2Q8WWQ8 2551 aa12.22□□□□□ -0.45
HOXC11-201ENST00000243082 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.46
HOXC11-201ENST00000243082 CDIP1Q9H305 208 aa12.21□□□□□ -0.46
HOXC11-201ENST00000243082 XAGE1AQ9HD64 81 aa12.21□□□□□ -0.46
HOXC11-201ENST00000243082 DNAH1Q9P2D7 4330 aa12.21□□□□□ -0.46
HOXC11-201ENST00000243082 C22orf24Q9Y442 160 aa12.2□□□□□ -0.46
HOXC11-201ENST00000243082 F8WDY8 70 aa12.18□□□□□ -0.46
HOXC11-201ENST00000243082 S100A7L2Q5SY68 101 aa12.18□□□□□ -0.46
HOXC11-201ENST00000243082 LECT2O14960 151 aa12.17□□□□□ -0.46
HOXC11-201ENST00000243082 IGLV6-57P01721 117 aa12.16□□□□□ -0.46
HOXC11-201ENST00000243082 RPL18AQ02543 176 aaKnown RBP12.16□□□□□ -0.46
HOXC11-201ENST00000243082 NDUFC2-KCTD14E9PQ53 114 aa12.16□□□□□ -0.46
HOXC11-201ENST00000243082 DNAL4O96015 105 aa12.16□□□□□ -0.46
HOXC11-201ENST00000243082 SYCNQ0VAF6 134 aa12.16□□□□□ -0.46
HOXC11-201ENST00000243082 CASC10Q5T4H9 136 aa12.16□□□□□ -0.46
HOXC11-201ENST00000243082 SIGMAR1Q99720 223 aa12.16□□□□□ -0.46
HOXC11-201ENST00000243082 C6orf99Q4VX62 202 aa12.14□□□□□ -0.47
HOXC11-201ENST00000243082 Q6ZRP5 223 aa12.13□□□□□ -0.47
HOXC11-201ENST00000243082 DYNC2H1Q8NCM8 4307 aaKnown RBP12.13□□□□□ -0.47
HOXC11-201ENST00000243082 PCP4P48539 62 aa12.13□□□□□ -0.47
HOXC11-201ENST00000243082 APLNQ9ULZ1 77 aa12.13□□□□□ -0.47
HOXC11-201ENST00000243082 USP17L23D6RBM5 183 aa12.12□□□□□ -0.47
HOXC11-201ENST00000243082 VPREB1P12018 145 aa12.12□□□□□ -0.47
HOXC11-201ENST00000243082 RMI2Q96E14 147 aa12.12□□□□□ -0.47
HOXC11-201ENST00000243082 GAGE2EQ4V326 116 aa12.11□□□□□ -0.47
HOXC11-201ENST00000243082 GAGE2DQ9UEU5 116 aa12.11□□□□□ -0.47
HOXC11-201ENST00000243082 LYSTQ99698 3801 aa12.11□□□□□ -0.47
HOXC11-201ENST00000243082 A0A1B0GX51 115 aa12.11□□□□□ -0.47
HOXC11-201ENST00000243082 SLPIP03973 132 aa12.11□□□□□ -0.47
HOXC11-201ENST00000243082 LINC00167Q96N53 147 aa12.11□□□□□ -0.47
HOXC11-201ENST00000243082 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
HOXC11-201ENST00000243082 Q8N814 137 aa12.1□□□□□ -0.47
HOXC11-201ENST00000243082 KRTAP1-5Q9BYS1 174 aa12.08□□□□□ -0.48
HOXC11-201ENST00000243082 XGP55808 180 aa12.08□□□□□ -0.48
HOXC11-201ENST00000243082 C9orf129Q5T035 196 aaKnown RBP12.07□□□□□ -0.48
HOXC11-201ENST00000243082 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
HOXC11-201ENST00000243082 NHLRC4P0CG21 123 aaPredicted RBP12.06□□□□□ -0.48
HOXC11-201ENST00000243082 LINC00575Q6W349 94 aa12.06□□□□□ -0.48
HOXC11-201ENST00000243082 ORMDL1Q9P0S3 153 aa12.06□□□□□ -0.48
HOXC11-201ENST00000243082 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
HOXC11-201ENST00000243082 M0R378 163 aa12.05□□□□□ -0.48
HOXC11-201ENST00000243082 MT-ATP8P03928 68 aa12.05□□□□□ -0.48
HOXC11-201ENST00000243082 TLX1NBP0CAT3 122 aa12.05□□□□□ -0.48
HOXC11-201ENST00000243082 FAM240AA0A1B0GVK7 77 aa12.04□□□□□ -0.48
HOXC11-201ENST00000243082 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
HOXC11-201ENST00000243082 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
HOXC11-201ENST00000243082 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
HOXC11-201ENST00000243082 INAFM2P0DMQ5 153 aa12.01□□□□□ -0.49
HOXC11-201ENST00000243082 DIRC1Q969H9 104 aa12.01□□□□□ -0.49
HOXC11-201ENST00000243082 PRKDCP78527 4128 aaKnown RBP12.01□□□□□ -0.49
HOXC11-201ENST00000243082 DNHD1Q96M86 4753 aa12□□□□□ -0.49
HOXC11-201ENST00000243082 hADV29S1A0JD25 119 aa12□□□□□ -0.49
HOXC11-201ENST00000243082 SNCGO76070 127 aa12□□□□□ -0.49
HOXC11-201ENST00000243082 PLECQ15149 4684 aaKnown RBP12□□□□□ -0.49
HOXC11-201ENST00000243082 C21orf62-AS1Q17RA5 79 aa11.99□□□□□ -0.49
HOXC11-201ENST00000243082 SERTAD4-AS1Q5TG53 156 aa11.99□□□□□ -0.49
HOXC11-201ENST00000243082 DNAH7Q8WXX0 4024 aa11.99□□□□□ -0.49
HOXC11-201ENST00000243082 DNAH10Q8IVF4 4471 aa11.99□□□□□ -0.49
HOXC11-201ENST00000243082 NUPR2A6NF83 97 aa11.98□□□□□ -0.49
HOXC11-201ENST00000243082 TENM2Q9NT68 2774 aa11.98□□□□□ -0.49
HOXC11-201ENST00000243082 TMEM256-PLSCR3K7ERE1 68 aa11.98□□□□□ -0.49
HOXC11-201ENST00000243082 SCGB1A1P11684 91 aa11.98□□□□□ -0.49
HOXC11-201ENST00000243082 ACYP1P07311 99 aa11.97□□□□□ -0.49
HOXC11-201ENST00000243082 PLA2G2DQ9UNK4 145 aa11.97□□□□□ -0.49
HOXC11-201ENST00000243082 TRBV7-6A0A0J9YX20 115 aa11.96□□□□□ -0.49
HOXC11-201ENST00000243082 ELOF1P60002 83 aaKnown RBP11.96□□□□□ -0.49
HOXC11-201ENST00000243082 C14orf132Q9NPU4 83 aa11.96□□□□□ -0.49
HOXC11-201ENST00000243082 MEGF8Q7Z7M0 2845 aa11.96□□□□□ -0.5
HOXC11-201ENST00000243082 COX7BP24311 80 aa11.96□□□□□ -0.5
HOXC11-201ENST00000243082 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
HOXC11-201ENST00000243082 C7orf33Q8WU49 177 aa11.94□□□□□ -0.5
HOXC11-201ENST00000243082 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
HOXC11-201ENST00000243082 GAGE2BQ13066 116 aa11.93□□□□□ -0.5
HOXC11-201ENST00000243082 GAGE2AQ6NT46 116 aa11.93□□□□□ -0.5
HOXC11-201ENST00000243082 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
HOXC11-201ENST00000243082 LOC107984640A0A0U1RRK4 108 aa11.92□□□□□ -0.5
HOXC11-201ENST00000243082 PSCAO43653 123 aa11.92□□□□□ -0.5
HOXC11-201ENST00000243082 Q6ZQY7 126 aa11.92□□□□□ -0.5
HOXC11-201ENST00000243082 KRTAP7-1Q8IUC3 87 aa11.92□□□□□ -0.5
HOXC11-201ENST00000243082 A0A1B0GV72 72 aa11.91□□□□□ -0.5
HOXC11-201ENST00000243082 KCNQ1DNQ9H478 68 aa11.91□□□□□ -0.5
HOXC11-201ENST00000243082 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
HOXC11-201ENST00000243082 STARD9Q9P2P6 4700 aa11.9□□□□□ -0.5
HOXC11-201ENST00000243082 JMJD7-PLA2G4BH0Y9G9 81 aa11.9□□□□□ -0.5
HOXC11-201ENST00000243082 LINC00528Q8N1L1 170 aa11.9□□□□□ -0.5
HOXC11-201ENST00000243082 SDIM1Q6ZPB5 146 aa11.89□□□□□ -0.51
HOXC11-201ENST00000243082 NBDYA0A0U1RRE5 68 aa11.89□□□□□ -0.51
HOXC11-201ENST00000243082 CNBPP62633 177 aaKnown RBP11.89□□□□□ -0.51
HOXC11-201ENST00000243082 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
HOXC11-201ENST00000243082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.87□□□□□ -0.51
HOXC11-201ENST00000243082 IGLV1-50A0A075B6I6 118 aa11.85□□□□□ -0.51
HOXC11-201ENST00000243082 H3BQ85 93 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms