RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
MSH6-201ENST00000234420 MYO18BQ8IUG5 2567 aa7.85□□□□□ -1.15
MSH6-201ENST00000234420 KLLNB2CW77 178 aa7.85□□□□□ -1.15
MSH6-201ENST00000234420 RTL8CO15255 209 aa7.84□□□□□ -1.15
MSH6-201ENST00000234420 LCA10Q71F78 164 aa7.84□□□□□ -1.15
MSH6-201ENST00000234420 LINC01600Q96MT4 127 aa7.84□□□□□ -1.15
MSH6-201ENST00000234420 CHCHD7Q9BUK0 85 aa7.84□□□□□ -1.15
MSH6-201ENST00000234420 CNFNQ9BYD5 112 aa7.84□□□□□ -1.15
MSH6-201ENST00000234420 ACANP16112 2415 aa7.84□□□□□ -1.15
MSH6-201ENST00000234420 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.16
MSH6-201ENST00000234420 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
MSH6-201ENST00000234420 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
MSH6-201ENST00000234420 APLNQ9ULZ1 77 aa7.82□□□□□ -1.16
MSH6-201ENST00000234420 F8P00451 2351 aa7.82□□□□□ -1.16
MSH6-201ENST00000234420 A0A096LNJ9 63 aa7.82□□□□□ -1.16
MSH6-201ENST00000234420 H3BS24 57 aa7.82□□□□□ -1.16
MSH6-201ENST00000234420 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
MSH6-201ENST00000234420 BCE1O60756 84 aa7.81□□□□□ -1.16
MSH6-201ENST00000234420 XIRP2A4UGR9 3374 aa7.81□□□□□ -1.16
MSH6-201ENST00000234420 LYPD5Q6UWN5 251 aa7.8□□□□□ -1.16
MSH6-201ENST00000234420 AMELXQ99217 191 aa7.8□□□□□ -1.16
MSH6-201ENST00000234420 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
MSH6-201ENST00000234420 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
MSH6-201ENST00000234420 COA5Q86WW8 74 aa7.78□□□□□ -1.16
MSH6-201ENST00000234420 UQCR11O14957 56 aa7.78□□□□□ -1.16
MSH6-201ENST00000234420 LINC00313P59037 77 aa7.78□□□□□ -1.16
MSH6-201ENST00000234420 LINC00574Q9H8X3 128 aa7.78□□□□□ -1.16
MSH6-201ENST00000234420 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
MSH6-201ENST00000234420 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
MSH6-201ENST00000234420 Q6ZRU5 148 aa7.77□□□□□ -1.17
MSH6-201ENST00000234420 Q8N2B8 174 aa7.77□□□□□ -1.17
MSH6-201ENST00000234420 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
MSH6-201ENST00000234420 FN1P02751 2386 aaKnown RBP7.76□□□□□ -1.17
MSH6-201ENST00000234420 MIR22HGQ0VDD5 57 aa7.76□□□□□ -1.17
MSH6-201ENST00000234420 FAM218AQ96MZ4 157 aa7.76□□□□□ -1.17
MSH6-201ENST00000234420 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
MSH6-201ENST00000234420 CACNA1AO00555 2505 aa7.76□□□□□ -1.17
MSH6-201ENST00000234420 CRIP3Q6Q6R5 217 aa7.76□□□□□ -1.17
MSH6-201ENST00000234420 TLN1Q9Y490 2541 aaKnown RBP7.75□□□□□ -1.17
MSH6-201ENST00000234420 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
MSH6-201ENST00000234420 LINC00315P59091 139 aa7.74□□□□□ -1.17
MSH6-201ENST00000234420 C5orf42Q9H799 3197 aa7.74□□□□□ -1.17
MSH6-201ENST00000234420 H3BPC8 53 aa7.74□□□□□ -1.17
MSH6-201ENST00000234420 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
MSH6-201ENST00000234420 Q6ZQT0 140 aa7.73□□□□□ -1.17
MSH6-201ENST00000234420 Q6ZSN1 163 aa7.72□□□□□ -1.17
MSH6-201ENST00000234420 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.18
MSH6-201ENST00000234420 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.18
MSH6-201ENST00000234420 IGLV1-51P01701 117 aa7.7□□□□□ -1.18
MSH6-201ENST00000234420 BPTFQ12830 3046 aa7.7□□□□□ -1.18
MSH6-201ENST00000234420 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
MSH6-201ENST00000234420 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
MSH6-201ENST00000234420 C11orf72Q8NBR9 251 aa7.69□□□□□ -1.18
MSH6-201ENST00000234420 WIPF1O43516 503 aa7.68□□□□□ -1.18
MSH6-201ENST00000234420 ANKHD1Q8IWZ3 2542 aaKnown RBP7.68□□□□□ -1.18
MSH6-201ENST00000234420 TRBV7-4A0A0J9YYF1 115 aa7.67□□□□□ -1.18
MSH6-201ENST00000234420 IGLV1-40P01703 118 aa7.67□□□□□ -1.18
MSH6-201ENST00000234420 TLN2Q9Y4G6 2542 aa7.67□□□□□ -1.18
MSH6-201ENST00000234420 Q6ZRP5 223 aa7.67□□□□□ -1.18
MSH6-201ENST00000234420 ACACBO00763 2458 aa7.67□□□□□ -1.18
MSH6-201ENST00000234420 DNAH12Q6ZR08 3092 aa7.67□□□□□ -1.18
MSH6-201ENST00000234420 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
MSH6-201ENST00000234420 C16orf95Q9H693 158 aa7.66□□□□□ -1.18
MSH6-201ENST00000234420 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.18
MSH6-201ENST00000234420 LINC00476Q8WZB0 136 aa7.65□□□□□ -1.19
MSH6-201ENST00000234420 A0A0D9SG42 100 aa7.64□□□□□ -1.19
MSH6-201ENST00000234420 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
MSH6-201ENST00000234420 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
MSH6-201ENST00000234420 Q8NBF4 154 aa7.63□□□□□ -1.19
MSH6-201ENST00000234420 ANKRD17O75179 2603 aaKnown RBP7.63□□□□□ -1.19
MSH6-201ENST00000234420 NBDYA0A0U1RRE5 68 aa7.63□□□□□ -1.19
MSH6-201ENST00000234420 ZNF575Q86XF7 245 aa7.63□□□□□ -1.19
MSH6-201ENST00000234420 A0A1B0GUV1 79 aa7.62□□□□□ -1.19
MSH6-201ENST00000234420 OBSCN-AS1Q96MR7 158 aa7.62□□□□□ -1.19
MSH6-201ENST00000234420 K7EQZ3 153 aa7.62□□□□□ -1.19
MSH6-201ENST00000234420 RBM12B-AS1Q9P1G2 102 aa7.62□□□□□ -1.19
MSH6-201ENST00000234420 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
MSH6-201ENST00000234420 PIEZO1Q92508 2521 aa7.61□□□□□ -1.19
MSH6-201ENST00000234420 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
MSH6-201ENST00000234420 EPM2AB3EWF7 344 aa7.6□□□□□ -1.19
MSH6-201ENST00000234420 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
MSH6-201ENST00000234420 LINC00167Q96N53 147 aa7.6□□□□□ -1.19
MSH6-201ENST00000234420 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
MSH6-201ENST00000234420 MUC22E2RYF6 1773 aaPredicted RBP7.59□□□□□ -1.19
MSH6-201ENST00000234420 ELOF1P60002 83 aaKnown RBP7.59□□□□□ -1.19
MSH6-201ENST00000234420 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.19
MSH6-201ENST00000234420 H7BZZ5 65 aa7.59□□□□□ -1.2
MSH6-201ENST00000234420 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.2
MSH6-201ENST00000234420 A0A1B0GW54 56 aa7.58□□□□□ -1.2
MSH6-201ENST00000234420 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
MSH6-201ENST00000234420 JMJD1CQ15652 2540 aa7.58□□□□□ -1.2
MSH6-201ENST00000234420 KLKP1Q107X0 134 aa7.57□□□□□ -1.2
MSH6-201ENST00000234420 DSCR10P59022 87 aa7.57□□□□□ -1.2
MSH6-201ENST00000234420 A0A1W2PPR1 153 aa7.56□□□□□ -1.2
MSH6-201ENST00000234420 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
MSH6-201ENST00000234420 LINC00588Q9Y4M8 146 aa7.55□□□□□ -1.2
MSH6-201ENST00000234420 COX8CQ7Z4L0 72 aa7.55□□□□□ -1.2
MSH6-201ENST00000234420 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
MSH6-201ENST00000234420 A8MWP4 228 aa7.54□□□□□ -1.2
MSH6-201ENST00000234420 CEP350Q5VT06 3117 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms