RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SPAG11BQ08648 103 aa11.04□□□□□ -0.64
LTBR-201ENST00000228918 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
LTBR-201ENST00000228918 WIPF1O43516 503 aa11.04□□□□□ -0.64
LTBR-201ENST00000228918 C6orf223Q8N319 242 aa11.04□□□□□ -0.64
LTBR-201ENST00000228918 IGKV3D-7A0A0C4DH55 119 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 INAFM1C9JVW0 142 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 CCKP06307 115 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 SPART-AS1P0CW21 52 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 C6orf99Q4VX62 202 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 NOTCH2Q04721 2471 aa11.03□□□□□ -0.64
LTBR-201ENST00000228918 TENM1Q9UKZ4 2725 aa11.02□□□□□ -0.64
LTBR-201ENST00000228918 JMJD7-PLA2G4BH0Y9G9 81 aa11.02□□□□□ -0.64
LTBR-201ENST00000228918 TMEM256-PLSCR3K7ERE1 68 aa11.02□□□□□ -0.64
LTBR-201ENST00000228918 HTN3P15516 51 aa11.02□□□□□ -0.64
LTBR-201ENST00000228918 MUC7Q8TAX7 377 aa11.02□□□□□ -0.64
LTBR-201ENST00000228918 PRR34Q9NV39 138 aa11.02□□□□□ -0.65
LTBR-201ENST00000228918 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
LTBR-201ENST00000228918 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
LTBR-201ENST00000228918 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
LTBR-201ENST00000228918 NSD1Q96L73 2696 aaPredicted RBP11.01□□□□□ -0.65
LTBR-201ENST00000228918 A0A087WVE0 104 aa11□□□□□ -0.65
LTBR-201ENST00000228918 USP17L23D6RBM5 183 aa11□□□□□ -0.65
LTBR-201ENST00000228918 KLK12Q9UKR0 248 aa11□□□□□ -0.65
LTBR-201ENST00000228918 CYSRT1A8MQ03 144 aa10.99□□□□□ -0.65
LTBR-201ENST00000228918 OXTP01178 125 aa10.99□□□□□ -0.65
LTBR-201ENST00000228918 LINC00575Q6W349 94 aa10.98□□□□□ -0.65
LTBR-201ENST00000228918 ENHOQ6UWT2 76 aa10.98□□□□□ -0.65
LTBR-201ENST00000228918 OTOGQ6ZRI0 2925 aa10.98□□□□□ -0.65
LTBR-201ENST00000228918 DSCR8Q96T75 97 aa10.96□□□□□ -0.65
LTBR-201ENST00000228918 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.66
LTBR-201ENST00000228918 IGLV6-57P01721 117 aa10.96□□□□□ -0.66
LTBR-201ENST00000228918 TRRAPQ9Y4A5 3859 aa10.95□□□□□ -0.66
LTBR-201ENST00000228918 LYPD5Q6UWN5 251 aa10.94□□□□□ -0.66
LTBR-201ENST00000228918 HIVEP1P15822 2718 aa10.94□□□□□ -0.66
LTBR-201ENST00000228918 WFDC9Q8NEX5 89 aa10.93□□□□□ -0.66
LTBR-201ENST00000228918 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
LTBR-201ENST00000228918 ATRQ13535 2644 aa10.93□□□□□ -0.66
LTBR-201ENST00000228918 Q5XG85 94 aa10.92□□□□□ -0.66
LTBR-201ENST00000228918 TEP1Q99973 2627 aaKnown RBP10.91□□□□□ -0.66
LTBR-201ENST00000228918 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
LTBR-201ENST00000228918 ATP5EP2Q5VTU8 51 aa10.91□□□□□ -0.66
LTBR-201ENST00000228918 C4orf26Q17RF5 130 aa10.9□□□□□ -0.66
LTBR-201ENST00000228918 TRBV10-3A0A0K0K1G6 114 aa10.88□□□□□ -0.67
LTBR-201ENST00000228918 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
LTBR-201ENST00000228918 Q6ZQT0 140 aa10.88□□□□□ -0.67
LTBR-201ENST00000228918 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
LTBR-201ENST00000228918 TRAV23DV6A0A075B6W5 121 aa10.88□□□□□ -0.67
LTBR-201ENST00000228918 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
LTBR-201ENST00000228918 LOC110117498A0A087WWA1 95 aa10.87□□□□□ -0.67
LTBR-201ENST00000228918 WFDC10BQ8IUB3 73 aa10.87□□□□□ -0.67
LTBR-201ENST00000228918 Q6ZQY7 126 aa10.86□□□□□ -0.67
LTBR-201ENST00000228918 UBL5Q9BZL1 73 aa10.86□□□□□ -0.67
LTBR-201ENST00000228918 LAMTOR3Q9UHA4 124 aa10.86□□□□□ -0.67
LTBR-201ENST00000228918 GHRHP01286 108 aa10.86□□□□□ -0.67
LTBR-201ENST00000228918 DIRC1Q969H9 104 aa10.86□□□□□ -0.67
LTBR-201ENST00000228918 H3BNG1 76 aa10.85□□□□□ -0.67
LTBR-201ENST00000228918 KPRPQ5T749 579 aaPredicted RBP10.85□□□□□ -0.67
LTBR-201ENST00000228918 KRTAP26-1Q6PEX3 210 aa10.85□□□□□ -0.67
LTBR-201ENST00000228918 HIGD2BQ4VC39 106 aa10.84□□□□□ -0.67
LTBR-201ENST00000228918 HRCT1Q6UXD1 115 aa10.84□□□□□ -0.67
LTBR-201ENST00000228918 RETNQ9HD89 108 aa10.84□□□□□ -0.67
LTBR-201ENST00000228918 CAMK2N2Q96S95 79 aa10.83□□□□□ -0.68
LTBR-201ENST00000228918 H3BQ85 93 aa10.83□□□□□ -0.68
LTBR-201ENST00000228918 ZNF73O43830 326 aaPredicted RBP10.82□□□□□ -0.68
LTBR-201ENST00000228918 VPREB1P12018 145 aa10.82□□□□□ -0.68
LTBR-201ENST00000228918 M0R2N4 97 aa10.82□□□□□ -0.68
LTBR-201ENST00000228918 FAM19A1Q7Z5A9 133 aa10.82□□□□□ -0.68
LTBR-201ENST00000228918 EGFEM1PQ0D2K5 195 aa10.81□□□□□ -0.68
LTBR-201ENST00000228918 COX7BP24311 80 aa10.81□□□□□ -0.68
LTBR-201ENST00000228918 ELOF1P60002 83 aaKnown RBP10.81□□□□□ -0.68
LTBR-201ENST00000228918 Q6ZTC4 211 aa10.81□□□□□ -0.68
LTBR-201ENST00000228918 C15orf56Q8N910 161 aa10.81□□□□□ -0.68
LTBR-201ENST00000228918 Q6ZRU5 148 aa10.8□□□□□ -0.68
LTBR-201ENST00000228918 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
LTBR-201ENST00000228918 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.79□□□□□ -0.68
LTBR-201ENST00000228918 TRBV7-6A0A0J9YX20 115 aa10.79□□□□□ -0.68
LTBR-201ENST00000228918 PDE6GP18545 87 aa10.78□□□□□ -0.68
LTBR-201ENST00000228918 OXLD1Q5BKU9 147 aa10.78□□□□□ -0.68
LTBR-201ENST00000228918 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
LTBR-201ENST00000228918 C20orf197Q8N268 126 aa10.78□□□□□ -0.68
LTBR-201ENST00000228918 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
LTBR-201ENST00000228918 M0R378 163 aa10.77□□□□□ -0.69
LTBR-201ENST00000228918 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
LTBR-201ENST00000228918 ESRGQ1W209 222 aa10.77□□□□□ -0.69
LTBR-201ENST00000228918 Q6ZVQ6 151 aa10.75□□□□□ -0.69
LTBR-201ENST00000228918 BCE1O60756 84 aa10.75□□□□□ -0.69
LTBR-201ENST00000228918 MRAPQ8TCY5 172 aa10.75□□□□□ -0.69
LTBR-201ENST00000228918 TRBV7-4A0A0J9YYF1 115 aa10.74□□□□□ -0.69
LTBR-201ENST00000228918 LINC01547P58512 204 aaPredicted RBP10.74□□□□□ -0.69
LTBR-201ENST00000228918 H7BZZ5 65 aa10.74□□□□□ -0.69
LTBR-201ENST00000228918 C1orf43Q9BWL3 253 aa10.74□□□□□ -0.69
LTBR-201ENST00000228918 ANK2Q01484 3957 aa10.74□□□□□ -0.69
LTBR-201ENST00000228918 SERP1Q9Y6X1 66 aa10.73□□□□□ -0.69
LTBR-201ENST00000228918 PKD1L1Q8TDX9 2849 aa10.73□□□□□ -0.69
LTBR-201ENST00000228918 LINC00528Q8N1L1 170 aa10.73□□□□□ -0.69
LTBR-201ENST00000228918 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
LTBR-201ENST00000228918 MAST4O15021 2626 aa10.72□□□□□ -0.69
LTBR-201ENST00000228918 TRAV7A0A075B6U4 112 aa10.72□□□□□ -0.69
LTBR-201ENST00000228918 Q6ZRP5 223 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms