RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HIST1H2BLQ99880 126 aa7.8□□□□□ -1.16
LSM5-201ENST00000223084 MAP1LC3CQ9BXW4 147 aa7.8□□□□□ -1.16
LSM5-201ENST00000223084 DPM2O94777 84 aa7.79□□□□□ -1.16
LSM5-201ENST00000223084 OXTP01178 125 aa7.79□□□□□ -1.16
LSM5-201ENST00000223084 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
LSM5-201ENST00000223084 PLNP26678 52 aa7.78□□□□□ -1.16
LSM5-201ENST00000223084 SPINK6Q6UWN8 80 aa7.78□□□□□ -1.16
LSM5-201ENST00000223084 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
LSM5-201ENST00000223084 A0A0U1RRA0 63 aa7.77□□□□□ -1.17
LSM5-201ENST00000223084 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
LSM5-201ENST00000223084 IGKCP01834 107 aa7.77□□□□□ -1.17
LSM5-201ENST00000223084 LINC00158P58513 81 aa7.77□□□□□ -1.17
LSM5-201ENST00000223084 TSPEAR-AS2P59090 65 aa7.77□□□□□ -1.17
LSM5-201ENST00000223084 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
LSM5-201ENST00000223084 COX17Q14061 63 aa7.76□□□□□ -1.17
LSM5-201ENST00000223084 LBHQ53QV2 105 aaPredicted RBP7.76□□□□□ -1.17
LSM5-201ENST00000223084 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
LSM5-201ENST00000223084 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
LSM5-201ENST00000223084 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
LSM5-201ENST00000223084 PLA2G2DQ9UNK4 145 aa7.76□□□□□ -1.17
LSM5-201ENST00000223084 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 GAGE10A6NGK3 116 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 RPL37AP8A6NKH3 93 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 LEPROTO15243 131 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 C3orf79P0CE67 100 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 KRTDAPP60985 99 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 TP73-AS1Q9UF72 201 aa7.75□□□□□ -1.17
LSM5-201ENST00000223084 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 C20orf202A1L168 122 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 HERVK_113P61574 105 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 Q8NDZ9 215 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 PLEKHB2Q96CS7 222 aa7.74□□□□□ -1.17
LSM5-201ENST00000223084 MYMXA0A1B0GTQ4 84 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 J3QQQ9 107 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 VPREB1P12018 145 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 AKR1D1P51857 326 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 HERV-K104P63124 156 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 MEIG1Q5JSS6 88 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
LSM5-201ENST00000223084 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
LSM5-201ENST00000223084 REG3GQ6UW15 175 aa7.71□□□□□ -1.18
LSM5-201ENST00000223084 MIR7-3HGQ8N6C7 128 aa7.71□□□□□ -1.18
LSM5-201ENST00000223084 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
LSM5-201ENST00000223084 IGKV2-28A0A075B6P5 120 aa7.69□□□□□ -1.18
LSM5-201ENST00000223084 E9PLD3 99 aa7.69□□□□□ -1.18
LSM5-201ENST00000223084 IGKV2D-28P01615 120 aa7.69□□□□□ -1.18
LSM5-201ENST00000223084 RPL24P83731 157 aaKnown RBP7.69□□□□□ -1.18
LSM5-201ENST00000223084 DAND5Q8N907 189 aa7.69□□□□□ -1.18
LSM5-201ENST00000223084 DIRC1Q969H9 104 aa7.69□□□□□ -1.18
LSM5-201ENST00000223084 TNXBP22105 4242 aa7.68□□□□□ -1.18
LSM5-201ENST00000223084 H0Y9J4 135 aa7.68□□□□□ -1.18
LSM5-201ENST00000223084 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
LSM5-201ENST00000223084 BCE1O60756 84 aa7.67□□□□□ -1.18
LSM5-201ENST00000223084 NMUP48645 174 aa7.67□□□□□ -1.18
LSM5-201ENST00000223084 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
LSM5-201ENST00000223084 IGLV1-50A0A075B6I6 118 aa7.66□□□□□ -1.18
LSM5-201ENST00000223084 ZNF861PO60384 105 aa7.66□□□□□ -1.18
LSM5-201ENST00000223084 IGKV2D-26A0A0A0MRZ7 120 aa7.65□□□□□ -1.18
LSM5-201ENST00000223084 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
LSM5-201ENST00000223084 TMEM238C9JI98 176 aa7.65□□□□□ -1.18
LSM5-201ENST00000223084 NCR3O14931 201 aa7.65□□□□□ -1.18
LSM5-201ENST00000223084 KRTAP10-8P60410 259 aa7.65□□□□□ -1.18
LSM5-201ENST00000223084 M0R378 163 aa7.64□□□□□ -1.19
LSM5-201ENST00000223084 JOSD1Q15040 202 aaPredicted RBP7.64□□□□□ -1.19
LSM5-201ENST00000223084 ATOH7Q8N100 152 aa7.64□□□□□ -1.19
LSM5-201ENST00000223084 TTTY13Q9BZ97 58 aa7.64□□□□□ -1.19
LSM5-201ENST00000223084 SCGB1D1O95968 90 aa7.63□□□□□ -1.19
LSM5-201ENST00000223084 RPL28P46779 137 aaKnown RBP7.63□□□□□ -1.19
LSM5-201ENST00000223084 UBE2AP49459 152 aa7.63□□□□□ -1.19
LSM5-201ENST00000223084 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
LSM5-201ENST00000223084 TMEM126AQ9H061 195 aa7.63□□□□□ -1.19
LSM5-201ENST00000223084 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
LSM5-201ENST00000223084 NPC2P61916 151 aa7.62□□□□□ -1.19
LSM5-201ENST00000223084 PRR26Q8N8Z3 221 aa7.62□□□□□ -1.19
LSM5-201ENST00000223084 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 PRLHP81277 87 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 ANKRD39Q53RE8 183 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 FAM19A1Q7Z5A9 133 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
LSM5-201ENST00000223084 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
LSM5-201ENST00000223084 LOC105371267A0A1B0GV96 52 aa7.59□□□□□ -1.19
LSM5-201ENST00000223084 HSBP1L1C9JCN9 74 aa7.59□□□□□ -1.19
LSM5-201ENST00000223084 LITAFQ99732 161 aa7.59□□□□□ -1.19
LSM5-201ENST00000223084 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.19
LSM5-201ENST00000223084 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
LSM5-201ENST00000223084 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
LSM5-201ENST00000223084 PRYO14603 147 aa7.56□□□□□ -1.2
LSM5-201ENST00000223084 TIMM17BO60830 172 aa7.56□□□□□ -1.2
LSM5-201ENST00000223084 SMIM6P0DI80 62 aa7.56□□□□□ -1.2
LSM5-201ENST00000223084 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
LSM5-201ENST00000223084 LINC00308Q8TCZ7 52 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms