RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 DAND5Q8N907 189 aa12.36□□□□□ -0.43
HOXA6-201ENST00000222728 RPL37AP61513 92 aaKnown RBP12.35□□□□□ -0.43
HOXA6-201ENST00000222728 LINC00587B1AMM8 73 aa12.34□□□□□ -0.43
HOXA6-201ENST00000222728 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
HOXA6-201ENST00000222728 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.44
HOXA6-201ENST00000222728 PCP2Q8IVA1 136 aa12.33□□□□□ -0.44
HOXA6-201ENST00000222728 Q8NDZ9 215 aa12.33□□□□□ -0.44
HOXA6-201ENST00000222728 C22orf24Q9Y442 160 aa12.33□□□□□ -0.44
HOXA6-201ENST00000222728 PLA2G2DQ9UNK4 145 aa12.32□□□□□ -0.44
HOXA6-201ENST00000222728 KRTAP10-4P60372 401 aaPredicted RBP12.31□□□□□ -0.44
HOXA6-201ENST00000222728 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
HOXA6-201ENST00000222728 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
HOXA6-201ENST00000222728 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
HOXA6-201ENST00000222728 JOSD1Q15040 202 aaPredicted RBP12.3□□□□□ -0.44
HOXA6-201ENST00000222728 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
HOXA6-201ENST00000222728 VPREB1P12018 145 aa12.29□□□□□ -0.44
HOXA6-201ENST00000222728 NPC2P61916 151 aa12.29□□□□□ -0.44
HOXA6-201ENST00000222728 UBE2BP63146 152 aa12.29□□□□□ -0.44
HOXA6-201ENST00000222728 NKAPP1Q8N9T2 125 aa12.29□□□□□ -0.44
HOXA6-201ENST00000222728 FLG2Q5D862 2391 aaPredicted RBP12.29□□□□□ -0.44
HOXA6-201ENST00000222728 IGLV5-37A0A075B6J1 123 aa12.28□□□□□ -0.44
HOXA6-201ENST00000222728 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
HOXA6-201ENST00000222728 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
HOXA6-201ENST00000222728 LITAFQ99732 161 aa12.28□□□□□ -0.44
HOXA6-201ENST00000222728 ABCA13Q86UQ4 5058 aa12.27□□□□□ -0.45
HOXA6-201ENST00000222728 PRR3P79522 188 aaKnown RBP12.27□□□□□ -0.45
HOXA6-201ENST00000222728 SCGB1D4Q6XE38 83 aa12.27□□□□□ -0.45
HOXA6-201ENST00000222728 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
HOXA6-201ENST00000222728 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
HOXA6-201ENST00000222728 RPL24P83731 157 aaKnown RBP12.26□□□□□ -0.45
HOXA6-201ENST00000222728 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
HOXA6-201ENST00000222728 PSORS1C2Q9UIG4 136 aa12.26□□□□□ -0.45
HOXA6-201ENST00000222728 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
HOXA6-201ENST00000222728 EIF4EBP3O60516 100 aaPredicted RBP12.25□□□□□ -0.45
HOXA6-201ENST00000222728 TIMM17BO60830 172 aa12.25□□□□□ -0.45
HOXA6-201ENST00000222728 LBHQ53QV2 105 aaPredicted RBP12.25□□□□□ -0.45
HOXA6-201ENST00000222728 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
HOXA6-201ENST00000222728 PYY3Q5JQD4 70 aa12.24□□□□□ -0.45
HOXA6-201ENST00000222728 PAM16Q9Y3D7 125 aa12.24□□□□□ -0.45
HOXA6-201ENST00000222728 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
HOXA6-201ENST00000222728 LOC107984156A0A0G2JMH3 177 aa12.22□□□□□ -0.45
HOXA6-201ENST00000222728 NCR3O14931 201 aa12.22□□□□□ -0.45
HOXA6-201ENST00000222728 C1orf137Q5JT78 98 aa12.22□□□□□ -0.45
HOXA6-201ENST00000222728 ARL17AQ8IVW1 177 aa12.22□□□□□ -0.45
HOXA6-201ENST00000222728 MIEN1Q9BRT3 115 aa12.22□□□□□ -0.45
HOXA6-201ENST00000222728 VAMP8Q9BV40 100 aa12.22□□□□□ -0.45
HOXA6-201ENST00000222728 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.45
HOXA6-201ENST00000222728 SPATA45Q537H7 98 aa12.21□□□□□ -0.45
HOXA6-201ENST00000222728 IGKV2-28A0A075B6P5 120 aa12.2□□□□□ -0.46
HOXA6-201ENST00000222728 IGKV2D-28P01615 120 aa12.2□□□□□ -0.46
HOXA6-201ENST00000222728 LINC00308Q8TCZ7 52 aa12.2□□□□□ -0.46
HOXA6-201ENST00000222728 TMEM238C9JI98 176 aa12.19□□□□□ -0.46
HOXA6-201ENST00000222728 COX8AP10176 69 aa12.18□□□□□ -0.46
HOXA6-201ENST00000222728 M0R378 163 aa12.17□□□□□ -0.46
HOXA6-201ENST00000222728 C14orf144Q96I85 54 aa12.17□□□□□ -0.46
HOXA6-201ENST00000222728 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
HOXA6-201ENST00000222728 SPANXCQ9NY87 97 aa12.17□□□□□ -0.46
HOXA6-201ENST00000222728 IGLV1-50A0A075B6I6 118 aa12.16□□□□□ -0.46
HOXA6-201ENST00000222728 NDUFC2O95298 119 aa12.13□□□□□ -0.47
HOXA6-201ENST00000222728 IGLV7-43P04211 117 aa12.13□□□□□ -0.47
HOXA6-201ENST00000222728 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
HOXA6-201ENST00000222728 PCLOQ9Y6V0 5065 aa12.12□□□□□ -0.47
HOXA6-201ENST00000222728 TRBV10-3A0A0K0K1G6 114 aa12.11□□□□□ -0.47
HOXA6-201ENST00000222728 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
HOXA6-201ENST00000222728 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
HOXA6-201ENST00000222728 DLEU1O43261 78 aa12.1□□□□□ -0.47
HOXA6-201ENST00000222728 SRSF9Q13242 221 aaKnown RBP eCLIP12.1□□□□□ -0.47
HOXA6-201ENST00000222728 Q6ZVH6 145 aa12.1□□□□□ -0.47
HOXA6-201ENST00000222728 BCE1O60756 84 aa12.09□□□□□ -0.47
HOXA6-201ENST00000222728 IFITM1P13164 125 aa12.09□□□□□ -0.47
HOXA6-201ENST00000222728 REG3GQ6UW15 175 aa12.09□□□□□ -0.47
HOXA6-201ENST00000222728 DDTP30046 118 aa12.08□□□□□ -0.48
HOXA6-201ENST00000222728 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
HOXA6-201ENST00000222728 TMEM126AQ9H061 195 aa12.08□□□□□ -0.48
HOXA6-201ENST00000222728 S100A7L2Q5SY68 101 aa12.07□□□□□ -0.48
HOXA6-201ENST00000222728 SPINK6Q6UWN8 80 aa12.06□□□□□ -0.48
HOXA6-201ENST00000222728 COPS9Q8WXC6 57 aa12.06□□□□□ -0.48
HOXA6-201ENST00000222728 MYCBP2O75592 4640 aa12.05□□□□□ -0.48
HOXA6-201ENST00000222728 LOC105371267A0A1B0GV96 52 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 PRYO14603 147 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 IGLV6-57P01721 117 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 C2orf91Q6ZV80 131 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 FAM19A1Q7Z5A9 133 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 OR13C6PQ8NH95 151 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 KCNQ1DNQ9H478 68 aa12.04□□□□□ -0.48
HOXA6-201ENST00000222728 ZNF861PO60384 105 aa12.03□□□□□ -0.48
HOXA6-201ENST00000222728 UBE2AP49459 152 aa12.03□□□□□ -0.48
HOXA6-201ENST00000222728 S100A12P80511 92 aa12.03□□□□□ -0.48
HOXA6-201ENST00000222728 PRLHP81277 87 aa12.03□□□□□ -0.48
HOXA6-201ENST00000222728 LINC00337Q8N6G1 96 aa12.03□□□□□ -0.48
HOXA6-201ENST00000222728 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
HOXA6-201ENST00000222728 LRP1Q07954 4544 aaKnown RBP12.03□□□□□ -0.48
HOXA6-201ENST00000222728 FAT3Q8TDW7 4589 aa12.01□□□□□ -0.49
HOXA6-201ENST00000222728 RPL28P46779 137 aaKnown RBP12.01□□□□□ -0.49
HOXA6-201ENST00000222728 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
HOXA6-201ENST00000222728 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
HOXA6-201ENST00000222728 KRTAP13-1Q8IUC0 172 aa12□□□□□ -0.49
HOXA6-201ENST00000222728 DIRC1Q969H9 104 aa12□□□□□ -0.49
HOXA6-201ENST00000222728 TRAV23DV6A0A075B6W5 121 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms