RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
UPK1A-201ENST00000222275 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
UPK1A-201ENST00000222275 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
UPK1A-201ENST00000222275 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
UPK1A-201ENST00000222275 HNRNPA3P51991 378 aaKnown RBP8.58□□□□□ -1.04
UPK1A-201ENST00000222275 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
UPK1A-201ENST00000222275 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
UPK1A-201ENST00000222275 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
UPK1A-201ENST00000222275 TNXBP22105 4242 aa8.57□□□□□ -1.04
UPK1A-201ENST00000222275 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
UPK1A-201ENST00000222275 TIMM17BO60830 172 aa8.57□□□□□ -1.04
UPK1A-201ENST00000222275 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
UPK1A-201ENST00000222275 A0A0U1RRA0 63 aa8.56□□□□□ -1.04
UPK1A-201ENST00000222275 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
UPK1A-201ENST00000222275 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
UPK1A-201ENST00000222275 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
UPK1A-201ENST00000222275 FAM19A5Q7Z5A7 132 aaPredicted RBP8.56□□□□□ -1.04
UPK1A-201ENST00000222275 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
UPK1A-201ENST00000222275 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
UPK1A-201ENST00000222275 MIEN1Q9BRT3 115 aa8.55□□□□□ -1.04
UPK1A-201ENST00000222275 TMEM238C9JI98 176 aa8.54□□□□□ -1.04
UPK1A-201ENST00000222275 M0QXV9 152 aa8.54□□□□□ -1.04
UPK1A-201ENST00000222275 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
UPK1A-201ENST00000222275 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
UPK1A-201ENST00000222275 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
UPK1A-201ENST00000222275 IGLV5-37A0A075B6J1 123 aa8.53□□□□□ -1.04
UPK1A-201ENST00000222275 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
UPK1A-201ENST00000222275 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
UPK1A-201ENST00000222275 LOC107984156A0A0G2JMH3 177 aa8.52□□□□□ -1.05
UPK1A-201ENST00000222275 Q6ZVH6 145 aa8.52□□□□□ -1.05
UPK1A-201ENST00000222275 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
UPK1A-201ENST00000222275 ARL17AQ8IVW1 177 aa8.52□□□□□ -1.05
UPK1A-201ENST00000222275 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
UPK1A-201ENST00000222275 UBE2BP63146 152 aa8.51□□□□□ -1.05
UPK1A-201ENST00000222275 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
UPK1A-201ENST00000222275 MRPL55Q7Z7F7 128 aaKnown RBP8.51□□□□□ -1.05
UPK1A-201ENST00000222275 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
UPK1A-201ENST00000222275 DLEU1O43261 78 aa8.5□□□□□ -1.05
UPK1A-201ENST00000222275 RPL37AP61513 92 aaKnown RBP8.5□□□□□ -1.05
UPK1A-201ENST00000222275 PYY3Q5JQD4 70 aa8.5□□□□□ -1.05
UPK1A-201ENST00000222275 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
UPK1A-201ENST00000222275 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
UPK1A-201ENST00000222275 J3QL48 77 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 COX8AP10176 69 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 VPREB1P12018 145 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 SPATA45Q537H7 98 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 DAND5Q8N907 189 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 UBR4Q5T4S7 5183 aa8.49□□□□□ -1.05
UPK1A-201ENST00000222275 NDUFC2O95298 119 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 IFITM1P13164 125 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 S100A12P80511 92 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 LITAFQ99732 161 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
UPK1A-201ENST00000222275 M0R378 163 aa8.47□□□□□ -1.05
UPK1A-201ENST00000222275 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
UPK1A-201ENST00000222275 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.06
UPK1A-201ENST00000222275 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
UPK1A-201ENST00000222275 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
UPK1A-201ENST00000222275 SLC25A34Q6PIV7 304 aa8.45□□□□□ -1.06
UPK1A-201ENST00000222275 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
UPK1A-201ENST00000222275 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
UPK1A-201ENST00000222275 LINC00518Q8N0U6 118 aa8.44□□□□□ -1.06
UPK1A-201ENST00000222275 CBY1Q9Y3M2 126 aa8.44□□□□□ -1.06
UPK1A-201ENST00000222275 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
UPK1A-201ENST00000222275 NPC2P61916 151 aa8.43□□□□□ -1.06
UPK1A-201ENST00000222275 C14orf144Q96I85 54 aa8.43□□□□□ -1.06
UPK1A-201ENST00000222275 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
UPK1A-201ENST00000222275 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
UPK1A-201ENST00000222275 SMIM6P0DI80 62 aa8.42□□□□□ -1.06
UPK1A-201ENST00000222275 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
UPK1A-201ENST00000222275 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
UPK1A-201ENST00000222275 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
UPK1A-201ENST00000222275 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
UPK1A-201ENST00000222275 RPL37AP8A6NKH3 93 aa8.41□□□□□ -1.06
UPK1A-201ENST00000222275 OXTP01178 125 aa8.41□□□□□ -1.06
UPK1A-201ENST00000222275 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
UPK1A-201ENST00000222275 Q8NDZ9 215 aa8.41□□□□□ -1.06
UPK1A-201ENST00000222275 NCR3O14931 201 aa8.4□□□□□ -1.06
UPK1A-201ENST00000222275 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.06
UPK1A-201ENST00000222275 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
UPK1A-201ENST00000222275 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
UPK1A-201ENST00000222275 HIST1H4GQ99525 98 aa8.39□□□□□ -1.07
UPK1A-201ENST00000222275 PRYO14603 147 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 BCE1O60756 84 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 DDTP30046 118 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 TMEM126AQ9H061 195 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
UPK1A-201ENST00000222275 LOC105371267A0A1B0GV96 52 aa8.37□□□□□ -1.07
UPK1A-201ENST00000222275 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
UPK1A-201ENST00000222275 TAL2Q16559 108 aa8.37□□□□□ -1.07
UPK1A-201ENST00000222275 SPINK6Q6UWN8 80 aa8.37□□□□□ -1.07
UPK1A-201ENST00000222275 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
UPK1A-201ENST00000222275 KCNQ1DNQ9H478 68 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms