RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 Q6ZRU5 148 aa14□□□□□ -0.17
TSPAN9-208ENST00000640568 C9orf163Q8N9P6 203 aa13.99□□□□□ -0.17
TSPAN9-208ENST00000640568 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
TSPAN9-208ENST00000640568 PKHD1P08F94 4074 aa13.98□□□□□ -0.17
TSPAN9-208ENST00000640568 LINC01620Q4KN68 170 aa13.97□□□□□ -0.17
TSPAN9-208ENST00000640568 UNQ6190/PRO20217Q6UXQ8 127 aa13.97□□□□□ -0.17
TSPAN9-208ENST00000640568 SCGB1D1O95968 90 aa13.96□□□□□ -0.17
TSPAN9-208ENST00000640568 DYNC1H1Q14204 4646 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-208ENST00000640568 ATOH7Q8N100 152 aa13.95□□□□□ -0.18
TSPAN9-208ENST00000640568 PKIGQ9Y2B9 76 aa13.95□□□□□ -0.18
TSPAN9-208ENST00000640568 TRBV30A0A0K0K1B3 111 aa13.94□□□□□ -0.18
TSPAN9-208ENST00000640568 LEPROTO15243 131 aa13.94□□□□□ -0.18
TSPAN9-208ENST00000640568 C10orf25Q5T742 122 aa13.94□□□□□ -0.18
TSPAN9-208ENST00000640568 PLEKHB2Q96CS7 222 aa13.94□□□□□ -0.18
TSPAN9-208ENST00000640568 EPPK1P58107 5090 aaKnown RBP13.94□□□□□ -0.18
TSPAN9-208ENST00000640568 RNF151Q2KHN1 245 aa13.93□□□□□ -0.18
TSPAN9-208ENST00000640568 C6orf48Q9UBA6 75 aa13.93□□□□□ -0.18
TSPAN9-208ENST00000640568 SFTA2Q6UW10 78 aa13.93□□□□□ -0.18
TSPAN9-208ENST00000640568 E9PLD3 99 aa13.92□□□□□ -0.18
TSPAN9-208ENST00000640568 STPG4Q8N801 248 aa13.92□□□□□ -0.18
TSPAN9-208ENST00000640568 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
TSPAN9-208ENST00000640568 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-208ENST00000640568 J3QQQ9 107 aa13.9□□□□□ -0.18
TSPAN9-208ENST00000640568 KRTAP10-1P60331 282 aa13.9□□□□□ -0.18
TSPAN9-208ENST00000640568 LOC107984640A0A0U1RRK4 108 aa13.89□□□□□ -0.19
TSPAN9-208ENST00000640568 HSBP1L1C9JCN9 74 aa13.89□□□□□ -0.19
TSPAN9-208ENST00000640568 RPL18AQ02543 176 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-208ENST00000640568 NDUFA12Q9UI09 145 aa13.88□□□□□ -0.19
TSPAN9-208ENST00000640568 C9orf116Q5BN46 136 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-208ENST00000640568 SDIM1Q6ZPB5 146 aa13.87□□□□□ -0.19
TSPAN9-208ENST00000640568 MYMXA0A1B0GTQ4 84 aa13.87□□□□□ -0.19
TSPAN9-208ENST00000640568 TSPEAR-AS2P59090 65 aa13.87□□□□□ -0.19
TSPAN9-208ENST00000640568 DNAH8Q96JB1 4490 aa13.86□□□□□ -0.19
TSPAN9-208ENST00000640568 NMUP48645 174 aa13.86□□□□□ -0.19
TSPAN9-208ENST00000640568 ZNF625Q96I27 306 aaPredicted RBP13.86□□□□□ -0.19
TSPAN9-208ENST00000640568 IGKV2-24A0A0C4DH68 120 aa13.85□□□□□ -0.19
TSPAN9-208ENST00000640568 HERV-K104P63124 156 aa13.85□□□□□ -0.19
TSPAN9-208ENST00000640568 GAGE2BQ13066 116 aa13.85□□□□□ -0.19
TSPAN9-208ENST00000640568 JOSD1Q15040 202 aaPredicted RBP13.85□□□□□ -0.19
TSPAN9-208ENST00000640568 NDUFC2-KCTD14E9PQ53 114 aa13.84□□□□□ -0.19
TSPAN9-208ENST00000640568 TLX1NBP0CAT3 122 aa13.84□□□□□ -0.19
TSPAN9-208ENST00000640568 ANKRD39Q53RE8 183 aa13.83□□□□□ -0.2
TSPAN9-208ENST00000640568 A0A096LNI7 61 aa13.82□□□□□ -0.2
TSPAN9-208ENST00000640568 MEIG1Q5JSS6 88 aa13.82□□□□□ -0.2
TSPAN9-208ENST00000640568 DPH3Q96FX2 82 aa13.82□□□□□ -0.2
TSPAN9-208ENST00000640568 ERG28Q9UKR5 140 aa13.82□□□□□ -0.2
TSPAN9-208ENST00000640568 IGKV2D-26A0A0A0MRZ7 120 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 PFN2P35080 140 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 PTTG1IPP53801 180 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 MAJINQ3KP22 176 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 GAGE2EQ4V326 116 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 LINC00474Q9P2X8 69 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 GAGE2DQ9UEU5 116 aa13.81□□□□□ -0.2
TSPAN9-208ENST00000640568 CHTF8P0CG12 524 aa13.8□□□□□ -0.2
TSPAN9-208ENST00000640568 Q6ZRP5 223 aa13.8□□□□□ -0.2
TSPAN9-208ENST00000640568 LINC00587B1AMM8 73 aa13.8□□□□□ -0.2
TSPAN9-208ENST00000640568 COX17Q14061 63 aa13.79□□□□□ -0.2
TSPAN9-208ENST00000640568 FAM30AQ9NZY2 134 aa13.79□□□□□ -0.2
TSPAN9-208ENST00000640568 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.79□□□□□ -0.2
TSPAN9-208ENST00000640568 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
TSPAN9-208ENST00000640568 Q6ZSA8 131 aa13.78□□□□□ -0.2
TSPAN9-208ENST00000640568 LINC00158P58513 81 aa13.77□□□□□ -0.21
TSPAN9-208ENST00000640568 SPACA4Q8TDM5 124 aa13.77□□□□□ -0.21
TSPAN9-208ENST00000640568 A0A0U1RRA0 63 aa13.76□□□□□ -0.21
TSPAN9-208ENST00000640568 PYY3Q5JQD4 70 aa13.76□□□□□ -0.21
TSPAN9-208ENST00000640568 PANO1I0J062 215 aa13.75□□□□□ -0.21
TSPAN9-208ENST00000640568 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
TSPAN9-208ENST00000640568 VAMP8Q9BV40 100 aa13.75□□□□□ -0.21
TSPAN9-208ENST00000640568 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
TSPAN9-208ENST00000640568 APOBP04114 4563 aaKnown RBP13.75□□□□□ -0.21
TSPAN9-208ENST00000640568 CIRBPQ14011 172 aaKnown RBP13.74□□□□□ -0.21
TSPAN9-208ENST00000640568 A0A0J9YXY3 114 aa13.73□□□□□ -0.21
TSPAN9-208ENST00000640568 XAGE1AQ9HD64 81 aa13.73□□□□□ -0.21
TSPAN9-208ENST00000640568 PAM16Q9Y3D7 125 aa13.73□□□□□ -0.21
TSPAN9-208ENST00000640568 HAMPP81172 84 aa13.72□□□□□ -0.21
TSPAN9-208ENST00000640568 SCGB1D4Q6XE38 83 aa13.72□□□□□ -0.21
TSPAN9-208ENST00000640568 PCP2Q8IVA1 136 aa13.72□□□□□ -0.21
TSPAN9-208ENST00000640568 SPATA45Q537H7 98 aa13.71□□□□□ -0.21
TSPAN9-208ENST00000640568 SCXQ7RTU7 201 aa13.71□□□□□ -0.21
TSPAN9-208ENST00000640568 A0A087WYN8 130 aa13.7□□□□□ -0.22
TSPAN9-208ENST00000640568 CDK2AP2O75956 126 aa13.7□□□□□ -0.22
TSPAN9-208ENST00000640568 BIRC6Q9NR09 4857 aa13.69□□□□□ -0.22
TSPAN9-208ENST00000640568 C9orf129Q5T035 196 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-208ENST00000640568 MIR7-3HGQ8N6C7 128 aa13.69□□□□□ -0.22
TSPAN9-208ENST00000640568 CIRBP-AS1Q8TBR5 109 aa13.69□□□□□ -0.22
TSPAN9-208ENST00000640568 SND1-IT1Q9HBX3 110 aa13.68□□□□□ -0.22
TSPAN9-208ENST00000640568 XGP55808 180 aa13.67□□□□□ -0.22
TSPAN9-208ENST00000640568 FAM19A5Q7Z5A7 132 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-208ENST00000640568 PLAC8Q9NZF1 115 aa13.66□□□□□ -0.22
TSPAN9-208ENST00000640568 TIMM17BO60830 172 aa13.65□□□□□ -0.22
TSPAN9-208ENST00000640568 S100A12P80511 92 aa13.65□□□□□ -0.22
TSPAN9-208ENST00000640568 DAND5Q8N907 189 aa13.65□□□□□ -0.22
TSPAN9-208ENST00000640568 A0A1W2PNN7 141 aa13.64□□□□□ -0.23
TSPAN9-208ENST00000640568 FAM168BA1KXE4 195 aa13.64□□□□□ -0.23
TSPAN9-208ENST00000640568 COX8AP10176 69 aa13.64□□□□□ -0.23
TSPAN9-208ENST00000640568 MIEN1Q9BRT3 115 aa13.64□□□□□ -0.23
TSPAN9-208ENST00000640568 LOC105371267A0A1B0GV96 52 aa13.63□□□□□ -0.23
TSPAN9-208ENST00000640568 TMEM238C9JI98 176 aa13.63□□□□□ -0.23
TSPAN9-208ENST00000640568 C14orf144Q96I85 54 aa13.61□□□□□ -0.23
TSPAN9-208ENST00000640568 BOD1L2Q8IYS8 172 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms