RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 COX7B2Q8TF08 81 aa14.45□□□□□ -0.1
CHRNA7-231ENST00000637786 PMCHL2Q9BQD1 86 aa14.45□□□□□ -0.1
CHRNA7-231ENST00000637786 PKIGQ9Y2B9 76 aa14.44□□□□□ -0.1
CHRNA7-231ENST00000637786 C20orf202A1L168 122 aa14.43□□□□□ -0.1
CHRNA7-231ENST00000637786 CKS1BP61024 79 aa14.43□□□□□ -0.1
CHRNA7-231ENST00000637786 LINC01620Q4KN68 170 aa14.43□□□□□ -0.1
CHRNA7-231ENST00000637786 UNQ6190/PRO20217Q6UXQ8 127 aa14.42□□□□□ -0.1
CHRNA7-231ENST00000637786 SDIM1Q6ZPB5 146 aa14.42□□□□□ -0.1
CHRNA7-231ENST00000637786 TRBV30A0A0K0K1B3 111 aa14.41□□□□□ -0.1
CHRNA7-231ENST00000637786 AKR1D1P51857 326 aa14.41□□□□□ -0.1
CHRNA7-231ENST00000637786 C2orf82Q6UX34 121 aa14.41□□□□□ -0.1
CHRNA7-231ENST00000637786 C10orf25Q5T742 122 aa14.4□□□□□ -0.1
CHRNA7-231ENST00000637786 LRP1BQ9NZR2 4599 aa14.4□□□□□ -0.1
CHRNA7-231ENST00000637786 HERVK_113P61574 105 aa14.39□□□□□ -0.11
CHRNA7-231ENST00000637786 SFTA2Q6UW10 78 aa14.38□□□□□ -0.11
CHRNA7-231ENST00000637786 Q6ZSA8 131 aa14.38□□□□□ -0.11
CHRNA7-231ENST00000637786 C6orf48Q9UBA6 75 aa14.38□□□□□ -0.11
CHRNA7-231ENST00000637786 TMA7Q9Y2S6 64 aaKnown RBP14.37□□□□□ -0.11
CHRNA7-231ENST00000637786 LOC107984640A0A0U1RRK4 108 aa14.36□□□□□ -0.11
CHRNA7-231ENST00000637786 TLX1NBP0CAT3 122 aa14.35□□□□□ -0.11
CHRNA7-231ENST00000637786 PLEKHB2Q96CS7 222 aa14.34□□□□□ -0.11
CHRNA7-231ENST00000637786 LEPROTO15243 131 aa14.33□□□□□ -0.12
CHRNA7-231ENST00000637786 CDK2AP2O75956 126 aa14.32□□□□□ -0.12
CHRNA7-231ENST00000637786 CIRBPQ14011 172 aaKnown RBP14.32□□□□□ -0.12
CHRNA7-231ENST00000637786 FAM30AQ9NZY2 134 aa14.32□□□□□ -0.12
CHRNA7-231ENST00000637786 DNAH8Q96JB1 4490 aa14.31□□□□□ -0.12
CHRNA7-231ENST00000637786 BIRC6Q9NR09 4857 aa14.31□□□□□ -0.12
CHRNA7-231ENST00000637786 E9PLD3 99 aa14.31□□□□□ -0.12
CHRNA7-231ENST00000637786 ZNF625Q96I27 306 aaPredicted RBP14.31□□□□□ -0.12
CHRNA7-231ENST00000637786 LINC00474Q9P2X8 69 aa14.31□□□□□ -0.12
CHRNA7-231ENST00000637786 A0A096LNI7 61 aa14.3□□□□□ -0.12
CHRNA7-231ENST00000637786 NDUFC2-KCTD14E9PQ53 114 aa14.29□□□□□ -0.12
CHRNA7-231ENST00000637786 PTTG1IPP53801 180 aa14.29□□□□□ -0.12
CHRNA7-231ENST00000637786 C9orf116Q5BN46 136 aaPredicted RBP14.29□□□□□ -0.12
CHRNA7-231ENST00000637786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.29□□□□□ -0.12
CHRNA7-231ENST00000637786 J3QQQ9 107 aa14.28□□□□□ -0.12
CHRNA7-231ENST00000637786 RPL18AQ02543 176 aaKnown RBP14.28□□□□□ -0.12
CHRNA7-231ENST00000637786 STPG4Q8N801 248 aa14.28□□□□□ -0.12
CHRNA7-231ENST00000637786 SPACA4Q8TDM5 124 aa14.28□□□□□ -0.12
CHRNA7-231ENST00000637786 NMUP48645 174 aa14.27□□□□□ -0.13
CHRNA7-231ENST00000637786 TSPEAR-AS2P59090 65 aa14.27□□□□□ -0.13
CHRNA7-231ENST00000637786 NDUFA12Q9UI09 145 aa14.27□□□□□ -0.13
CHRNA7-231ENST00000637786 CHTF8P0CG12 524 aa14.26□□□□□ -0.13
CHRNA7-231ENST00000637786 HERV-K104P63124 156 aa14.26□□□□□ -0.13
CHRNA7-231ENST00000637786 GAGE2BQ13066 116 aa14.26□□□□□ -0.13
CHRNA7-231ENST00000637786 Q6ZRP5 223 aa14.26□□□□□ -0.13
CHRNA7-231ENST00000637786 IGKV2-24A0A0C4DH68 120 aa14.25□□□□□ -0.13
CHRNA7-231ENST00000637786 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
CHRNA7-231ENST00000637786 PANO1I0J062 215 aa14.25□□□□□ -0.13
CHRNA7-231ENST00000637786 LGALS3P17931 250 aaKnown RBP14.25□□□□□ -0.13
CHRNA7-231ENST00000637786 XGP55808 180 aa14.25□□□□□ -0.13
CHRNA7-231ENST00000637786 APOBP04114 4563 aaKnown RBP14.25□□□□□ -0.13
CHRNA7-231ENST00000637786 COX17Q14061 63 aa14.24□□□□□ -0.13
CHRNA7-231ENST00000637786 ATOH7Q8N100 152 aa14.24□□□□□ -0.13
CHRNA7-231ENST00000637786 SCGB1D1O95968 90 aa14.23□□□□□ -0.13
CHRNA7-231ENST00000637786 MAJINQ3KP22 176 aa14.23□□□□□ -0.13
CHRNA7-231ENST00000637786 SCXQ7RTU7 201 aa14.23□□□□□ -0.13
CHRNA7-231ENST00000637786 ERG28Q9UKR5 140 aa14.23□□□□□ -0.13
CHRNA7-231ENST00000637786 LINC00587B1AMM8 73 aa14.2□□□□□ -0.14
CHRNA7-231ENST00000637786 GAGE2EQ4V326 116 aa14.2□□□□□ -0.14
CHRNA7-231ENST00000637786 CIRBP-AS1Q8TBR5 109 aa14.2□□□□□ -0.14
CHRNA7-231ENST00000637786 DPH3Q96FX2 82 aa14.2□□□□□ -0.14
CHRNA7-231ENST00000637786 GAGE2DQ9UEU5 116 aa14.2□□□□□ -0.14
CHRNA7-231ENST00000637786 A0A087WYN8 130 aa14.19□□□□□ -0.14
CHRNA7-231ENST00000637786 IGKV2D-26A0A0A0MRZ7 120 aa14.19□□□□□ -0.14
CHRNA7-231ENST00000637786 PLAC8Q9NZF1 115 aa14.19□□□□□ -0.14
CHRNA7-231ENST00000637786 PFN2P35080 140 aa14.18□□□□□ -0.14
CHRNA7-231ENST00000637786 JOSD1Q15040 202 aaPredicted RBP14.18□□□□□ -0.14
CHRNA7-231ENST00000637786 ANKRD39Q53RE8 183 aa14.18□□□□□ -0.14
CHRNA7-231ENST00000637786 KIAA1109Q2LD37 5005 aa14.18□□□□□ -0.14
CHRNA7-231ENST00000637786 EPM2AB3EWF7 344 aa14.17□□□□□ -0.14
CHRNA7-231ENST00000637786 HSBP1L1C9JCN9 74 aa14.17□□□□□ -0.14
CHRNA7-231ENST00000637786 HAMPP81172 84 aa14.16□□□□□ -0.14
CHRNA7-231ENST00000637786 RYR1P21817 5038 aa14.16□□□□□ -0.14
CHRNA7-231ENST00000637786 MEIG1Q5JSS6 88 aa14.15□□□□□ -0.14
CHRNA7-231ENST00000637786 C9orf129Q5T035 196 aaKnown RBP14.15□□□□□ -0.14
CHRNA7-231ENST00000637786 HSPG2P98160 4391 aa14.14□□□□□ -0.15
CHRNA7-231ENST00000637786 LINC00158P58513 81 aa14.14□□□□□ -0.15
CHRNA7-231ENST00000637786 XAGE1AQ9HD64 81 aa14.13□□□□□ -0.15
CHRNA7-231ENST00000637786 ZNF815PA8K554 130 aa14.12□□□□□ -0.15
CHRNA7-231ENST00000637786 SMIM13P0DJ93 91 aa14.12□□□□□ -0.15
CHRNA7-231ENST00000637786 A0A0J9YXY3 114 aa14.11□□□□□ -0.15
CHRNA7-231ENST00000637786 A0A1W2PNN7 141 aa14.11□□□□□ -0.15
CHRNA7-231ENST00000637786 SND1-IT1Q9HBX3 110 aa14.11□□□□□ -0.15
CHRNA7-231ENST00000637786 TTTY13Q9BZ97 58 aa14.09□□□□□ -0.15
CHRNA7-231ENST00000637786 PLA2G2DQ9UNK4 145 aa14.09□□□□□ -0.15
CHRNA7-231ENST00000637786 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
CHRNA7-231ENST00000637786 FAM168BA1KXE4 195 aa14.08□□□□□ -0.16
CHRNA7-231ENST00000637786 TIMM17BO60830 172 aa14.07□□□□□ -0.16
CHRNA7-231ENST00000637786 PYY3Q5JQD4 70 aa14.07□□□□□ -0.16
CHRNA7-231ENST00000637786 PCP2Q8IVA1 136 aa14.07□□□□□ -0.16
CHRNA7-231ENST00000637786 MIR7-3HGQ8N6C7 128 aa14.07□□□□□ -0.16
CHRNA7-231ENST00000637786 KRTAP7-1Q8IUC3 87 aa14.06□□□□□ -0.16
CHRNA7-231ENST00000637786 FAM19A5Q7Z5A7 132 aaPredicted RBP14.05□□□□□ -0.16
CHRNA7-231ENST00000637786 VAMP8Q9BV40 100 aa14.04□□□□□ -0.16
CHRNA7-231ENST00000637786 SMR3BP02814 79 aaPredicted RBP14.03□□□□□ -0.16
CHRNA7-231ENST00000637786 SERTAD4-AS1Q5TG53 156 aa14.03□□□□□ -0.16
CHRNA7-231ENST00000637786 LINC00528Q8N1L1 170 aa14.03□□□□□ -0.16
CHRNA7-231ENST00000637786 Q8N1X5 172 aa14.03□□□□□ -0.16
CHRNA7-231ENST00000637786 TP73-AS1Q9UF72 201 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms