RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022		A0A096LNI7	61 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	IGHV1-58	A0A0C4DH39	117 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	IGKV2-24	A0A0C4DH68	120 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022		K7EP34	96 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	AMN1	Q8IY45	258 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	NRAC	Q8N912	160 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	NUP35	Q8NFH5	326 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	BORCS7	Q96B45	105 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TMEM101	Q96IK0	257 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	BTF3L4	Q96K17	158 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	PLA2G2D	Q9UNK4	145 aa		4.59	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SMKR1	H3BMG3	65 aa		4.58	□□□□□ -1.68
CACNA1A-222	ENST00000636022	VCY	O14598	125 aa		4.58	□□□□□ -1.68
CACNA1A-222	ENST00000636022	CD164L2	Q6UWJ8	174 aa		4.58	□□□□□ -1.68
CACNA1A-222	ENST00000636022	GTF2H5	Q6ZYL4	71 aa		4.58	□□□□□ -1.68
CACNA1A-222	ENST00000636022	LINC00526	Q96FQ7	95 aa		4.58	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SPANXA1	Q9NS26	97 aa		4.58	□□□□□ -1.68
CACNA1A-222	ENST00000636022	GAGE10	A6NGK3	116 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022		M0QXV9	152 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SUMO2	P61956	95 aa	Known RBP	4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	RPL23	P62829	140 aa	Known RBP	4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	PRR3	P79522	188 aa	Known RBP	4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	RIG	Q13278	110 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SS18	Q15532	418 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	MRPL54	Q6P161	138 aa	Known RBP	4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SMIM20	Q8N5G0	67 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C7orf33	Q8WU49	177 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	ANAPC16	Q96DE5	110 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	UBE2D4	Q9Y2X8	147 aa		4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	CSDC2	Q9Y534	153 aa	Known RBP	4.57	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SMIM27	A0A1W2PRY6	76 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C9orf118	A6NHY6	69 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022		H3BRM9	83 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	PPP1R17	O96001	155 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SYCN	Q0VAF6	134 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	PMCHL1	Q16048	86 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	KIAA1644	Q3SXP7	199 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	MRPL51	Q4U2R6	128 aa	Known RBP	4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	FAM104B	Q5XKR9	115 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	CARD19	Q96LW7	228 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	LINC00474	Q9P2X8	69 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	NAT8B	Q9UHF3	227 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	HSPB8	Q9UJY1	196 aa		4.56	□□□□□ -1.68
CACNA1A-222	ENST00000636022	ZNF561-AS1	K7EIQ3	104 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	FCER1G	P30273	86 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	CAMP	P49913	170 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	RNASE13	Q5GAN3	156 aa	Known RBP	4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	FAM104A	Q969W3	186 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	LINC01600	Q96MT4	127 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	KIR2DL4	Q99706	377 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	KRTAP4-12	Q9BQ66	201 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C20orf78	Q9BR46	151 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	TIMM21	Q9BVV7	248 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	PKIG	Q9Y2B9	76 aa		4.55	□□□□□ -1.68
CACNA1A-222	ENST00000636022	IGLV4-69	A0A075B6H9	119 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	TRAV9-1	A0A075B6T8	112 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	COX7A2L	O14548	114 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SEC11A	P67812	179 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	ADIRF	Q15847	76 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022		Q6ZUT4	128 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	TRAPPC1	Q9Y5R8	145 aa		4.54	□□□□□ -1.68
CACNA1A-222	ENST00000636022	TRAV13-1	A0A0B4J241	112 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022		A0A0J9YXV3	536 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	LOC107984640	A0A0U1RRK4	108 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022		A0A1B0GXF2	115 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SERF1A	O75920	110 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C3orf79	P0CE67	100 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	MAL	P21145	153 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	CKS2	P33552	79 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	KRTAP10-8	P60410	259 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	RPL39	P62891	51 aa	Known RBP	4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SPINK6	Q6UWN8	80 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	FA2H	Q7L5A8	372 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C5orf38	Q86SI9	138 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C18orf32	Q8TCD1	76 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	C2orf48	Q96LS8	159 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	PPDPF	Q9H3Y8	114 aa		4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.53	□□□□□ -1.68
CACNA1A-222	ENST00000636022		A0A1W2PNN7	141 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022		A6NDN8	102 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022		D6R8Y8	96 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022		J3QR89	54 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	TNFRSF6B	O95407	300 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	APOM	O95445	188 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022		Q6ZRP5	223 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	ERAS	Q7Z444	233 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	CAMK2N2	Q96S95	79 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	SMIM2	Q9BVW6	85 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	LPA	P08519	4548 aa		4.52	□□□□□ -1.69
CACNA1A-222	ENST00000636022	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022		B5MCH6	92 aa		4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	NPY	P01303	97 aa		4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	HBB	P68871	147 aa		4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	MRPS36	P82909	103 aa	Known RBP	4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	SPAG11B	Q08648	103 aa		4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	GAGE2B	Q13066	116 aa		4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	OPRPN	Q99935	248 aa	Predicted RBP	4.51	□□□□□ -1.69
CACNA1A-222	ENST00000636022	CDIP1	Q9H305	208 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms