RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 TOMM7Q9P0U1 55 aa12.38□□□□□ -0.43
CROCCP4-202ENST00000633627 PRSS2P07478 247 aa12.37□□□□□ -0.43
CROCCP4-202ENST00000633627 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
CROCCP4-202ENST00000633627 C6orf226Q5I0X4 101 aa12.37□□□□□ -0.43
CROCCP4-202ENST00000633627 CIRBP-AS1Q8TBR5 109 aa12.37□□□□□ -0.43
CROCCP4-202ENST00000633627 C6orf48Q9UBA6 75 aa12.37□□□□□ -0.43
CROCCP4-202ENST00000633627 IGLV5-39A0A0G2JS06 123 aa12.36□□□□□ -0.43
CROCCP4-202ENST00000633627 PKIGQ9Y2B9 76 aa12.36□□□□□ -0.43
CROCCP4-202ENST00000633627 A0A096LNI7 61 aa12.35□□□□□ -0.43
CROCCP4-202ENST00000633627 LOC107984640A0A0U1RRK4 108 aa12.35□□□□□ -0.43
CROCCP4-202ENST00000633627 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
CROCCP4-202ENST00000633627 COX7B2Q8TF08 81 aa12.35□□□□□ -0.43
CROCCP4-202ENST00000633627 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
CROCCP4-202ENST00000633627 H0Y8G0 127 aa12.34□□□□□ -0.43
CROCCP4-202ENST00000633627 TMEM170BQ5T4T1 132 aa12.34□□□□□ -0.43
CROCCP4-202ENST00000633627 CKS1BP61024 79 aa12.33□□□□□ -0.44
CROCCP4-202ENST00000633627 Q8N1X5 172 aa12.33□□□□□ -0.44
CROCCP4-202ENST00000633627 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
CROCCP4-202ENST00000633627 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
CROCCP4-202ENST00000633627 TLX1NBP0CAT3 122 aa12.32□□□□□ -0.44
CROCCP4-202ENST00000633627 CXCL5P42830 114 aa12.32□□□□□ -0.44
CROCCP4-202ENST00000633627 SMR3BP02814 79 aaPredicted RBP12.31□□□□□ -0.44
CROCCP4-202ENST00000633627 PTTG1IPP53801 180 aa12.31□□□□□ -0.44
CROCCP4-202ENST00000633627 A0A087WYN8 130 aa12.3□□□□□ -0.44
CROCCP4-202ENST00000633627 TMEM223A0PJW6 202 aa12.3□□□□□ -0.44
CROCCP4-202ENST00000633627 LINC00474Q9P2X8 69 aa12.3□□□□□ -0.44
CROCCP4-202ENST00000633627 GAGE2BQ13066 116 aa12.29□□□□□ -0.44
CROCCP4-202ENST00000633627 MAJINQ3KP22 176 aa12.29□□□□□ -0.44
CROCCP4-202ENST00000633627 C9orf116Q5BN46 136 aaPredicted RBP12.29□□□□□ -0.44
CROCCP4-202ENST00000633627 PLAC8Q9NZF1 115 aa12.29□□□□□ -0.44
CROCCP4-202ENST00000633627 SYS1-DBNDD2H3BUS1 97 aa12.28□□□□□ -0.44
CROCCP4-202ENST00000633627 PLNP26678 52 aa12.28□□□□□ -0.44
CROCCP4-202ENST00000633627 Q6ZRP5 223 aa12.28□□□□□ -0.44
CROCCP4-202ENST00000633627 DPH3Q96FX2 82 aa12.28□□□□□ -0.44
CROCCP4-202ENST00000633627 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
CROCCP4-202ENST00000633627 DPM2O94777 84 aa12.27□□□□□ -0.45
CROCCP4-202ENST00000633627 RPL18AQ02543 176 aaKnown RBP12.27□□□□□ -0.45
CROCCP4-202ENST00000633627 NDUFC2-KCTD14E9PQ53 114 aa12.26□□□□□ -0.45
CROCCP4-202ENST00000633627 KRTAP4-5Q9BYR2 181 aa12.26□□□□□ -0.45
CROCCP4-202ENST00000633627 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
CROCCP4-202ENST00000633627 EPM2AB3EWF7 344 aa12.25□□□□□ -0.45
CROCCP4-202ENST00000633627 C3orf79P0CE67 100 aa12.25□□□□□ -0.45
CROCCP4-202ENST00000633627 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
CROCCP4-202ENST00000633627 STPG4Q8N801 248 aa12.25□□□□□ -0.45
CROCCP4-202ENST00000633627 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
CROCCP4-202ENST00000633627 IGKCP01834 107 aa12.24□□□□□ -0.45
CROCCP4-202ENST00000633627 LINC01545Q5VT33 79 aa12.24□□□□□ -0.45
CROCCP4-202ENST00000633627 LINC00528Q8N1L1 170 aa12.23□□□□□ -0.45
CROCCP4-202ENST00000633627 HIST3H2BBQ8N257 126 aa12.23□□□□□ -0.45
CROCCP4-202ENST00000633627 GAGE2EQ4V326 116 aa12.22□□□□□ -0.45
CROCCP4-202ENST00000633627 ZNF625Q96I27 306 aaPredicted RBP12.22□□□□□ -0.45
CROCCP4-202ENST00000633627 GAGE2DQ9UEU5 116 aa12.22□□□□□ -0.45
CROCCP4-202ENST00000633627 A0A1W2PNN7 141 aa12.21□□□□□ -0.45
CROCCP4-202ENST00000633627 FAM229AH3BQW9 127 aa12.21□□□□□ -0.45
CROCCP4-202ENST00000633627 Q5VSD8 79 aa12.21□□□□□ -0.45
CROCCP4-202ENST00000633627 S100A6P06703 90 aa12.2□□□□□ -0.46
CROCCP4-202ENST00000633627 KRTDAPP60985 99 aa12.2□□□□□ -0.46
CROCCP4-202ENST00000633627 SFTA2Q6UW10 78 aa12.19□□□□□ -0.46
CROCCP4-202ENST00000633627 HIST1H2BLQ99880 126 aa12.19□□□□□ -0.46
CROCCP4-202ENST00000633627 C9orf129Q5T035 196 aaKnown RBP12.18□□□□□ -0.46
CROCCP4-202ENST00000633627 SRRM2Q9UQ35 2752 aaKnown RBP12.17□□□□□ -0.46
CROCCP4-202ENST00000633627 LEPROTO15243 131 aa12.17□□□□□ -0.46
CROCCP4-202ENST00000633627 S100A2P29034 98 aa12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 TSPEAR-AS2P59090 65 aa12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 KRTAP10-4P60372 401 aaPredicted RBP12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 HERVK_113P61574 105 aa12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 KRTAP7-1Q8IUC3 87 aa12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 PLEKHB2Q96CS7 222 aa12.16□□□□□ -0.46
CROCCP4-202ENST00000633627 FAM168BA1KXE4 195 aa12.15□□□□□ -0.46
CROCCP4-202ENST00000633627 C5orf52A6NGY3 159 aa12.15□□□□□ -0.46
CROCCP4-202ENST00000633627 XAGE1AQ9HD64 81 aa12.15□□□□□ -0.46
CROCCP4-202ENST00000633627 ERG28Q9UKR5 140 aa12.15□□□□□ -0.46
CROCCP4-202ENST00000633627 NDUFA12Q9UI09 145 aa12.14□□□□□ -0.47
CROCCP4-202ENST00000633627 J3QQQ9 107 aa12.13□□□□□ -0.47
CROCCP4-202ENST00000633627 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
CROCCP4-202ENST00000633627 PFN2P35080 140 aa12.13□□□□□ -0.47
CROCCP4-202ENST00000633627 COX17Q14061 63 aa12.13□□□□□ -0.47
CROCCP4-202ENST00000633627 E9PLD3 99 aa12.12□□□□□ -0.47
CROCCP4-202ENST00000633627 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
CROCCP4-202ENST00000633627 C20orf202A1L168 122 aa12.11□□□□□ -0.47
CROCCP4-202ENST00000633627 HERV-K104P63124 156 aa12.11□□□□□ -0.47
CROCCP4-202ENST00000633627 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
CROCCP4-202ENST00000633627 MYMXA0A1B0GTQ4 84 aa12.1□□□□□ -0.47
CROCCP4-202ENST00000633627 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
CROCCP4-202ENST00000633627 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
CROCCP4-202ENST00000633627 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
CROCCP4-202ENST00000633627 PHF5AQ7RTV0 110 aaKnown RBP12.09□□□□□ -0.47
CROCCP4-202ENST00000633627 LGALS3P17931 250 aaKnown RBP12.08□□□□□ -0.48
CROCCP4-202ENST00000633627 NMUP48645 174 aa12.08□□□□□ -0.48
CROCCP4-202ENST00000633627 PLA2G2DQ9UNK4 145 aa12.08□□□□□ -0.48
CROCCP4-202ENST00000633627 SND1-IT1Q9HBX3 110 aa12.07□□□□□ -0.48
CROCCP4-202ENST00000633627 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
CROCCP4-202ENST00000633627 AKR1D1P51857 326 aa12.06□□□□□ -0.48
CROCCP4-202ENST00000633627 LINC00158P58513 81 aa12.06□□□□□ -0.48
CROCCP4-202ENST00000633627 PKHD1L1Q86WI1 4243 aa12.06□□□□□ -0.48
CROCCP4-202ENST00000633627 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
CROCCP4-202ENST00000633627 M0QXV9 152 aa12.05□□□□□ -0.48
CROCCP4-202ENST00000633627 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
CROCCP4-202ENST00000633627 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms