RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 TPPP3Q9BW30 176 aa4.1□□□□□ -1.75
TCF4-266ENST00000628689 NXT2Q9NPJ8 142 aaKnown RBP4.1□□□□□ -1.75
TCF4-266ENST00000628689 PCP4L1A6NKN8 68 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 SNAI2O43623 268 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 CKS2P33552 79 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 SPANXN1Q5VSR9 72 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 RNASEKQ6P5S7 137 aaKnown RBP4.09□□□□□ -1.75
TCF4-266ENST00000628689 NTM-AS1Q6ZSK4 140 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 MRPL52Q86TS9 123 aaKnown RBP4.09□□□□□ -1.75
TCF4-266ENST00000628689 OR10AG1Q8NH19 301 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 MRAP2Q96G30 205 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 PRELID3AQ96N28 172 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 MAP1LC3CQ9BXW4 147 aa4.09□□□□□ -1.75
TCF4-266ENST00000628689 IGKV3D-20A0A0C4DH25 116 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
TCF4-266ENST00000628689 H3BVH4 76 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 LEPROTL1O95214 131 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 C20orf203Q8NBC4 194 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 NEXN-AS1Q8NBZ9 246 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 VAMP8Q9BV40 100 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 MAP1LC3AQ9H492 121 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 PHLDA3Q9Y5J5 127 aa4.08□□□□□ -1.76
TCF4-266ENST00000628689 TMSB15BA0A087X1C1 80 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 HSBP1L1C9JCN9 74 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 D6R8Y8 96 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 M0R381 172 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 TCAPO15273 167 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 SMIM17P0DL12 118 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 DDTP30046 118 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 KRTDAPP60985 99 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 TEX43Q6ZNM6 134 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 AP1S3Q96PC3 154 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 C20orf78Q9BR46 151 aa4.07□□□□□ -1.76
TCF4-266ENST00000628689 IGLV4-60A0A075B6I1 120 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 TRBV25-1A0A075B6N4 114 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 LINC01546A6NGU7 62 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 NUPR1O60356 82 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 HBDP02042 147 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 MRPL51Q4U2R6 128 aaKnown RBP4.06□□□□□ -1.76
TCF4-266ENST00000628689 TMEM97Q5BJF2 176 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 AMN1Q8IY45 258 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 PPDPFQ9H3Y8 114 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 PKIGQ9Y2B9 76 aa4.06□□□□□ -1.76
TCF4-266ENST00000628689 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
TCF4-266ENST00000628689 IGHV1-24A0A0C4DH33 117 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 SYS1-DBNDD2H3BUS1 97 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 M0R2T5 61 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 ATP5LO75964 103 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 C3orf79P0CE67 100 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
TCF4-266ENST00000628689 RPL32P62910 135 aaKnown RBP4.05□□□□□ -1.76
TCF4-266ENST00000628689 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 ZNF56Q15929 161 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 ORMDL2Q53FV1 153 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 PHF5AQ7RTV0 110 aaKnown RBP4.05□□□□□ -1.76
TCF4-266ENST00000628689 FAM19A2Q8N3H0 131 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 Q8N8P6 123 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 ST20Q9HBF5 79 aa4.05□□□□□ -1.76
TCF4-266ENST00000628689 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
TCF4-266ENST00000628689 FCER1GP30273 86 aa4.04□□□□□ -1.76
TCF4-266ENST00000628689 CARD19Q96LW7 228 aa4.04□□□□□ -1.76
TCF4-266ENST00000628689 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
TCF4-266ENST00000628689 UQCR10Q9UDW1 63 aa4.04□□□□□ -1.76
TCF4-266ENST00000628689 A0A1B0GUV1 79 aa4.03□□□□□ -1.76
TCF4-266ENST00000628689 IFI27P40305 119 aaPredicted RBP4.03□□□□□ -1.76
TCF4-266ENST00000628689 C9orf116Q5BN46 136 aaPredicted RBP4.03□□□□□ -1.76
TCF4-266ENST00000628689 LINC01545Q5VT33 79 aa4.03□□□□□ -1.76
TCF4-266ENST00000628689 LINC00173Q6ZV60 143 aa4.03□□□□□ -1.76
TCF4-266ENST00000628689 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.76
TCF4-266ENST00000628689 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
TCF4-266ENST00000628689 A0A087WZ39 114 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 LOC389332A0A1B0GUA5 103 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 LINC00587B1AMM8 73 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 F8WDY8 70 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 M0R143 59 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 VCYO14598 125 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 NPYP01303 97 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 LINC00337Q8N6G1 96 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 CHCHD10Q8WYQ3 142 aaPredicted RBP4.02□□□□□ -1.77
TCF4-266ENST00000628689 IFI27L1Q96BM0 104 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 KIR2DL4Q99706 377 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 TMEM243Q9BU79 118 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
TCF4-266ENST00000628689 A0A087X002 238 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 LOC107984640A0A0U1RRK4 108 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 MUC21A0A140T8X8 626 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.01□□□□□ -1.77
TCF4-266ENST00000628689 SSTP61278 116 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 PAPPA-AS1Q5QFB9 102 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 NRACQ8N912 160 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 SMIM2Q9BVW6 85 aa4.01□□□□□ -1.77
TCF4-266ENST00000628689 PRO1933Q9H354 126 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms