RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 LCE2BO14633 110 aa9.15□□□□□ -0.94
SOX2-OT-237ENST00000625581 IFI27L1Q96BM0 104 aa9.15□□□□□ -0.94
SOX2-OT-237ENST00000625581 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
SOX2-OT-237ENST00000625581 TOMM7Q9P0U1 55 aa9.15□□□□□ -0.94
SOX2-OT-237ENST00000625581 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 SPINK8P0C7L1 97 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 STPG4Q8N801 248 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
SOX2-OT-237ENST00000625581 SRRM2Q9UQ35 2752 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 C11orf86A6NJI1 115 aa9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 ATP6V1G1O75348 118 aa9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 PRSS2P07478 247 aa9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 RPL18AQ02543 176 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
SOX2-OT-237ENST00000625581 Q6ZRP5 223 aa9.12□□□□□ -0.95
SOX2-OT-237ENST00000625581 IGLV5-39A0A0G2JS06 123 aa9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 H3BRM9 83 aa9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 PLA2G1BP04054 148 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 CKS1BP61024 79 aa9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 C9orf116Q5BN46 136 aaPredicted RBP9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-237ENST00000625581 LEPROTL1O95214 131 aa9.1□□□□□ -0.95
SOX2-OT-237ENST00000625581 S100A1P23297 94 aa9.1□□□□□ -0.95
SOX2-OT-237ENST00000625581 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
SOX2-OT-237ENST00000625581 F8VRH5 84 aa9.09□□□□□ -0.95
SOX2-OT-237ENST00000625581 CXCL5P42830 114 aa9.09□□□□□ -0.95
SOX2-OT-237ENST00000625581 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-237ENST00000625581 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
SOX2-OT-237ENST00000625581 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
SOX2-OT-237ENST00000625581 ODF1Q14990 250 aa9.08□□□□□ -0.96
SOX2-OT-237ENST00000625581 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
SOX2-OT-237ENST00000625581 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
SOX2-OT-237ENST00000625581 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
SOX2-OT-237ENST00000625581 FABP4P15090 132 aa9.06□□□□□ -0.96
SOX2-OT-237ENST00000625581 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
SOX2-OT-237ENST00000625581 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
SOX2-OT-237ENST00000625581 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
SOX2-OT-237ENST00000625581 TMEM223A0PJW6 202 aa9.05□□□□□ -0.96
SOX2-OT-237ENST00000625581 H0Y8G0 127 aa9.05□□□□□ -0.96
SOX2-OT-237ENST00000625581 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-237ENST00000625581 C9orf129Q5T035 196 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-237ENST00000625581 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
SOX2-OT-237ENST00000625581 HNRNPA3P51991 378 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-237ENST00000625581 C7orf33Q8WU49 177 aa9.04□□□□□ -0.96
SOX2-OT-237ENST00000625581 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-237ENST00000625581 ZNF625Q96I27 306 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-237ENST00000625581 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-237ENST00000625581 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-237ENST00000625581 FAM19A5Q7Z5A7 132 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-237ENST00000625581 PMCHL2Q9BQD1 86 aa9.01□□□□□ -0.97
SOX2-OT-237ENST00000625581 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
SOX2-OT-237ENST00000625581 PLNP26678 52 aa8.99□□□□□ -0.97
SOX2-OT-237ENST00000625581 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
SOX2-OT-237ENST00000625581 MAP1LC3CQ9BXW4 147 aa8.99□□□□□ -0.97
SOX2-OT-237ENST00000625581 DPM2O94777 84 aa8.98□□□□□ -0.97
SOX2-OT-237ENST00000625581 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
SOX2-OT-237ENST00000625581 FAT3Q8TDW7 4589 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 SYS1-DBNDD2H3BUS1 97 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 M0QXV9 152 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 IGKCP01834 107 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 ERG28Q9UKR5 140 aa8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-237ENST00000625581 PFN2P35080 140 aa8.95□□□□□ -0.98
SOX2-OT-237ENST00000625581 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
SOX2-OT-237ENST00000625581 HERC1Q15751 4861 aa8.95□□□□□ -0.98
SOX2-OT-237ENST00000625581 C3orf79P0CE67 100 aa8.94□□□□□ -0.98
SOX2-OT-237ENST00000625581 COX17Q14061 63 aa8.94□□□□□ -0.98
SOX2-OT-237ENST00000625581 LINC01545Q5VT33 79 aa8.94□□□□□ -0.98
SOX2-OT-237ENST00000625581 LEPROTO15243 131 aa8.93□□□□□ -0.98
SOX2-OT-237ENST00000625581 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
SOX2-OT-237ENST00000625581 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
SOX2-OT-237ENST00000625581 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
SOX2-OT-237ENST00000625581 NDUFA12Q9UI09 145 aa8.92□□□□□ -0.98
SOX2-OT-237ENST00000625581 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
SOX2-OT-237ENST00000625581 IGLV5-37A0A075B6J1 123 aa8.91□□□□□ -0.98
SOX2-OT-237ENST00000625581 PLEKHB2Q96CS7 222 aa8.91□□□□□ -0.98
SOX2-OT-237ENST00000625581 TP73-AS1Q9UF72 201 aa8.91□□□□□ -0.98
SOX2-OT-237ENST00000625581 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
SOX2-OT-237ENST00000625581 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
SOX2-OT-237ENST00000625581 J3QQQ9 107 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms