RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	LINC00528	Q8N1L1	170 aa		11.69	□□□□□ -0.54
CADM1-222	ENST00000616271	HIST1H2BH	Q93079	126 aa		11.69	□□□□□ -0.54
CADM1-222	ENST00000616271	HIST1H2BN	Q99877	126 aa		11.69	□□□□□ -0.54
CADM1-222	ENST00000616271	HIST1H2BM	Q99879	126 aa		11.69	□□□□□ -0.54
CADM1-222	ENST00000616271		A0A087WYN8	130 aa		11.68	□□□□□ -0.54
CADM1-222	ENST00000616271	TRAV12-1	A0A0B4J245	112 aa		11.68	□□□□□ -0.54
CADM1-222	ENST00000616271	TRBV30	A0A0K0K1B3	111 aa		11.68	□□□□□ -0.54
CADM1-222	ENST00000616271	DPH3	Q96FX2	82 aa		11.68	□□□□□ -0.54
CADM1-222	ENST00000616271	PLAC8	Q9NZF1	115 aa		11.68	□□□□□ -0.54
CADM1-222	ENST00000616271	C6orf48	Q9UBA6	75 aa		11.68	□□□□□ -0.54
CADM1-222	ENST00000616271	LEPROTL1	O95214	131 aa		11.67	□□□□□ -0.54
CADM1-222	ENST00000616271	ZNF22	P17026	224 aa	Predicted RBP	11.67	□□□□□ -0.54
CADM1-222	ENST00000616271	PTTG1IP	P53801	180 aa		11.67	□□□□□ -0.54
CADM1-222	ENST00000616271	C6orf226	Q5I0X4	101 aa		11.67	□□□□□ -0.54
CADM1-222	ENST00000616271	C2orf82	Q6UX34	121 aa		11.67	□□□□□ -0.54
CADM1-222	ENST00000616271	NUPR1	O60356	82 aa		11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	SPINK8	P0C7L1	97 aa		11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	TLX1NB	P0CAT3	122 aa		11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	CXCL5	P42830	114 aa		11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	CKS1B	P61024	79 aa		11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	RPL18A	Q02543	176 aa	Known RBP	11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.66	□□□□□ -0.54
CADM1-222	ENST00000616271	C11orf86	A6NJI1	115 aa		11.65	□□□□□ -0.54
CADM1-222	ENST00000616271	GAGE2B	Q13066	116 aa		11.65	□□□□□ -0.54
CADM1-222	ENST00000616271	COX7B2	Q8TF08	81 aa		11.65	□□□□□ -0.54
CADM1-222	ENST00000616271	STPG4	Q8N801	248 aa		11.64	□□□□□ -0.55
CADM1-222	ENST00000616271	HSPB8	Q9UJY1	196 aa		11.64	□□□□□ -0.55
CADM1-222	ENST00000616271		F8VRH5	84 aa		11.63	□□□□□ -0.55
CADM1-222	ENST00000616271	PLA2G1B	P04054	148 aa	Known RBP	11.63	□□□□□ -0.55
CADM1-222	ENST00000616271	IGLV5-39	A0A0G2JS06	123 aa		11.62	□□□□□ -0.55
CADM1-222	ENST00000616271	TMEM170B	Q5T4T1	132 aa		11.61	□□□□□ -0.55
CADM1-222	ENST00000616271	FAT1	Q14517	4588 aa		11.6	□□□□□ -0.55
CADM1-222	ENST00000616271	NDUFC2-KCTD14	E9PQ53	114 aa		11.6	□□□□□ -0.55
CADM1-222	ENST00000616271	FABP4	P15090	132 aa		11.6	□□□□□ -0.55
CADM1-222	ENST00000616271	ODF1	Q14990	250 aa		11.6	□□□□□ -0.55
CADM1-222	ENST00000616271		Q6ZRP5	223 aa		11.6	□□□□□ -0.55
CADM1-222	ENST00000616271	C9orf116	Q5BN46	136 aa	Predicted RBP	11.59	□□□□□ -0.55
CADM1-222	ENST00000616271		H0Y8G0	127 aa		11.58	□□□□□ -0.56
CADM1-222	ENST00000616271	RPL37A	P61513	92 aa	Known RBP	11.57	□□□□□ -0.56
CADM1-222	ENST00000616271	COA6	Q5JTJ3	125 aa	Known RBP	11.57	□□□□□ -0.56
CADM1-222	ENST00000616271	KRTAP10-4	P60372	401 aa	Predicted RBP	11.56	□□□□□ -0.56
CADM1-222	ENST00000616271	GAGE2E	Q4V326	116 aa		11.56	□□□□□ -0.56
CADM1-222	ENST00000616271	C7orf33	Q8WU49	177 aa		11.56	□□□□□ -0.56
CADM1-222	ENST00000616271	GAGE2D	Q9UEU5	116 aa		11.56	□□□□□ -0.56
CADM1-222	ENST00000616271	VPS13B	Q7Z7G8	4022 aa		11.56	□□□□□ -0.56
CADM1-222	ENST00000616271		A0A1W2PNN7	141 aa		11.55	□□□□□ -0.56
CADM1-222	ENST00000616271	TMEM223	A0PJW6	202 aa		11.55	□□□□□ -0.56
CADM1-222	ENST00000616271	MAP1LC3C	Q9BXW4	147 aa		11.55	□□□□□ -0.56
CADM1-222	ENST00000616271	INAFM2	P0DMQ5	153 aa		11.54	□□□□□ -0.56
CADM1-222	ENST00000616271	ABCA13	Q86UQ4	5058 aa		11.54	□□□□□ -0.56
CADM1-222	ENST00000616271	PLN	P26678	52 aa		11.53	□□□□□ -0.56
CADM1-222	ENST00000616271	SFTA2	Q6UW10	78 aa		11.53	□□□□□ -0.56
CADM1-222	ENST00000616271	DPM2	O94777	84 aa		11.51	□□□□□ -0.57
CADM1-222	ENST00000616271	C9orf129	Q5T035	196 aa	Known RBP	11.51	□□□□□ -0.57
CADM1-222	ENST00000616271	PCLO	Q9Y6V0	5065 aa		11.51	□□□□□ -0.57
CADM1-222	ENST00000616271	FAM168B	A1KXE4	195 aa		11.49	□□□□□ -0.57
CADM1-222	ENST00000616271	SYS1-DBNDD2	H3BUS1	97 aa		11.49	□□□□□ -0.57
CADM1-222	ENST00000616271	IGKC	P01834	107 aa		11.48	□□□□□ -0.57
CADM1-222	ENST00000616271	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.48	□□□□□ -0.57
CADM1-222	ENST00000616271	ZNF625	Q96I27	306 aa	Predicted RBP	11.48	□□□□□ -0.57
CADM1-222	ENST00000616271	PMCHL2	Q9BQD1	86 aa		11.48	□□□□□ -0.57
CADM1-222	ENST00000616271	SRRM2	Q9UQ35	2752 aa	Known RBP	11.48	□□□□□ -0.57
CADM1-222	ENST00000616271	XAGE1A	Q9HD64	81 aa		11.47	□□□□□ -0.57
CADM1-222	ENST00000616271	HERVK_113	P61574	105 aa		11.46	□□□□□ -0.57
CADM1-222	ENST00000616271	COX17	Q14061	63 aa		11.46	□□□□□ -0.57
CADM1-222	ENST00000616271	PHF5A	Q7RTV0	110 aa	Known RBP	11.46	□□□□□ -0.57
CADM1-222	ENST00000616271	KRTAP7-1	Q8IUC3	87 aa		11.46	□□□□□ -0.57
CADM1-222	ENST00000616271	ERG28	Q9UKR5	140 aa		11.46	□□□□□ -0.57
CADM1-222	ENST00000616271	PRR3	P79522	188 aa	Known RBP	11.45	□□□□□ -0.58
CADM1-222	ENST00000616271	PET117	Q6UWS5	81 aa		11.45	□□□□□ -0.58
CADM1-222	ENST00000616271		M0QXV9	152 aa		11.44	□□□□□ -0.58
CADM1-222	ENST00000616271	PFN2	P35080	140 aa		11.44	□□□□□ -0.58
CADM1-222	ENST00000616271	LINC01545	Q5VT33	79 aa		11.44	□□□□□ -0.58
CADM1-222	ENST00000616271	LEPROT	O15243	131 aa		11.43	□□□□□ -0.58
CADM1-222	ENST00000616271	C3orf79	P0CE67	100 aa		11.43	□□□□□ -0.58
CADM1-222	ENST00000616271	PLEKHB2	Q96CS7	222 aa		11.43	□□□□□ -0.58
CADM1-222	ENST00000616271	HERV-K104	P63124	156 aa		11.42	□□□□□ -0.58
CADM1-222	ENST00000616271	SERTAD4-AS1	Q5TG53	156 aa		11.42	□□□□□ -0.58
CADM1-222	ENST00000616271	FLG2	Q5D862	2391 aa	Predicted RBP	11.41	□□□□□ -0.58
CADM1-222	ENST00000616271	HNRNPA3	P51991	378 aa	Known RBP	11.41	□□□□□ -0.58
CADM1-222	ENST00000616271	NDUFA12	Q9UI09	145 aa		11.41	□□□□□ -0.58
CADM1-222	ENST00000616271	PLA2G2D	Q9UNK4	145 aa		11.41	□□□□□ -0.58
CADM1-222	ENST00000616271	TSPEAR-AS2	P59090	65 aa		11.4	□□□□□ -0.58
CADM1-222	ENST00000616271	KRTDAP	P60985	99 aa		11.4	□□□□□ -0.58
CADM1-222	ENST00000616271	MYMX	A0A1B0GTQ4	84 aa		11.39	□□□□□ -0.59
CADM1-222	ENST00000616271		J3QQQ9	107 aa		11.39	□□□□□ -0.59
CADM1-222	ENST00000616271	TP73-AS1	Q9UF72	201 aa		11.39	□□□□□ -0.59
CADM1-222	ENST00000616271	HIST3H2BB	Q8N257	126 aa		11.38	□□□□□ -0.59
CADM1-222	ENST00000616271	SND1-IT1	Q9HBX3	110 aa		11.38	□□□□□ -0.59
CADM1-222	ENST00000616271	PSORS1C2	Q9UIG4	136 aa		11.38	□□□□□ -0.59
CADM1-222	ENST00000616271	C22orf24	Q9Y442	160 aa		11.38	□□□□□ -0.59
CADM1-222	ENST00000616271	LINC00587	B1AMM8	73 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271		E9PLD3	99 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	S100A6	P06703	90 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	LGALS3	P17931	250 aa	Known RBP	11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	NMU	P48645	174 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	LINC00158	P58513	81 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	UBE2B	P63146	152 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	MEIG1	Q5JSS6	88 aa		11.37	□□□□□ -0.59
CADM1-222	ENST00000616271	IGLV5-37	A0A075B6J1	123 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms