RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 C11orf86A6NJI1 115 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 H3BRM9 83 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 SPINK8P0C7L1 97 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 FABP4P15090 132 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
IRF1-211ENST00000613424 C2orf82Q6UX34 121 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 PKIGQ9Y2B9 76 aa10.58□□□□□ -0.72
IRF1-211ENST00000613424 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
IRF1-211ENST00000613424 C6orf48Q9UBA6 75 aa10.57□□□□□ -0.72
IRF1-211ENST00000613424 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
IRF1-211ENST00000613424 CKS1BP61024 79 aa10.56□□□□□ -0.72
IRF1-211ENST00000613424 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
IRF1-211ENST00000613424 KRTAP4-5Q9BYR2 181 aa10.56□□□□□ -0.72
IRF1-211ENST00000613424 A0A087WYN8 130 aa10.55□□□□□ -0.72
IRF1-211ENST00000613424 H0Y8G0 127 aa10.55□□□□□ -0.72
IRF1-211ENST00000613424 GAGE2BQ13066 116 aa10.55□□□□□ -0.72
IRF1-211ENST00000613424 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
IRF1-211ENST00000613424 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
IRF1-211ENST00000613424 F8VRH5 84 aa10.54□□□□□ -0.72
IRF1-211ENST00000613424 PTTG1IPP53801 180 aa10.54□□□□□ -0.72
IRF1-211ENST00000613424 COA6Q5JTJ3 125 aaKnown RBP10.54□□□□□ -0.72
IRF1-211ENST00000613424 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
IRF1-211ENST00000613424 LINC00474Q9P2X8 69 aa10.54□□□□□ -0.72
IRF1-211ENST00000613424 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
IRF1-211ENST00000613424 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
IRF1-211ENST00000613424 RPL18AQ02543 176 aaKnown RBP10.53□□□□□ -0.72
IRF1-211ENST00000613424 ODF1Q14990 250 aa10.53□□□□□ -0.72
IRF1-211ENST00000613424 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
IRF1-211ENST00000613424 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
IRF1-211ENST00000613424 EPM2AB3EWF7 344 aa10.52□□□□□ -0.73
IRF1-211ENST00000613424 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
IRF1-211ENST00000613424 CXCL5P42830 114 aa10.52□□□□□ -0.73
IRF1-211ENST00000613424 STPG4Q8N801 248 aa10.52□□□□□ -0.73
IRF1-211ENST00000613424 PLAC8Q9NZF1 115 aa10.52□□□□□ -0.73
IRF1-211ENST00000613424 Q5VSD8 79 aa10.51□□□□□ -0.73
IRF1-211ENST00000613424 Q6ZRP5 223 aa10.51□□□□□ -0.73
IRF1-211ENST00000613424 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
IRF1-211ENST00000613424 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
IRF1-211ENST00000613424 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
IRF1-211ENST00000613424 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
IRF1-211ENST00000613424 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
IRF1-211ENST00000613424 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
IRF1-211ENST00000613424 PMCHL2Q9BQD1 86 aa10.48□□□□□ -0.73
IRF1-211ENST00000613424 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
IRF1-211ENST00000613424 A0A1W2PNN7 141 aa10.47□□□□□ -0.73
IRF1-211ENST00000613424 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.73
IRF1-211ENST00000613424 PLNP26678 52 aa10.46□□□□□ -0.73
IRF1-211ENST00000613424 DPM2O94777 84 aa10.45□□□□□ -0.74
IRF1-211ENST00000613424 IGKCP01834 107 aa10.44□□□□□ -0.74
IRF1-211ENST00000613424 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
IRF1-211ENST00000613424 C9orf129Q5T035 196 aaKnown RBP10.42□□□□□ -0.74
IRF1-211ENST00000613424 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
IRF1-211ENST00000613424 SRRM2Q9UQ35 2752 aaKnown RBP10.41□□□□□ -0.74
IRF1-211ENST00000613424 FAM168BA1KXE4 195 aa10.41□□□□□ -0.74
IRF1-211ENST00000613424 C3orf79P0CE67 100 aa10.41□□□□□ -0.74
IRF1-211ENST00000613424 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
IRF1-211ENST00000613424 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
IRF1-211ENST00000613424 ZNF625Q96I27 306 aaPredicted RBP10.41□□□□□ -0.74
IRF1-211ENST00000613424 LINC01545Q5VT33 79 aa10.4□□□□□ -0.74
IRF1-211ENST00000613424 C7orf33Q8WU49 177 aa10.4□□□□□ -0.74
IRF1-211ENST00000613424 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
IRF1-211ENST00000613424 KRTDAPP60985 99 aa10.39□□□□□ -0.75
IRF1-211ENST00000613424 SFTA2Q6UW10 78 aa10.39□□□□□ -0.75
IRF1-211ENST00000613424 PCLOQ9Y6V0 5065 aa10.39□□□□□ -0.75
IRF1-211ENST00000613424 LEPROTO15243 131 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 S100A6P06703 90 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 INAFM2P0DMQ5 153 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 PFN2P35080 140 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 KRTAP7-1Q8IUC3 87 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 ERG28Q9UKR5 140 aa10.38□□□□□ -0.75
IRF1-211ENST00000613424 HERVK_113P61574 105 aa10.37□□□□□ -0.75
IRF1-211ENST00000613424 PHF5AQ7RTV0 110 aaKnown RBP10.37□□□□□ -0.75
IRF1-211ENST00000613424 FAM19A5Q7Z5A7 132 aaPredicted RBP10.37□□□□□ -0.75
IRF1-211ENST00000613424 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
IRF1-211ENST00000613424 COX17Q14061 63 aa10.36□□□□□ -0.75
IRF1-211ENST00000613424 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
IRF1-211ENST00000613424 NDUFA12Q9UI09 145 aa10.36□□□□□ -0.75
IRF1-211ENST00000613424 S100A2P29034 98 aa10.35□□□□□ -0.75
IRF1-211ENST00000613424 J3QQQ9 107 aa10.34□□□□□ -0.75
IRF1-211ENST00000613424 SERTAD4-AS1Q5TG53 156 aa10.34□□□□□ -0.75
IRF1-211ENST00000613424 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
IRF1-211ENST00000613424 MYMXA0A1B0GTQ4 84 aa10.33□□□□□ -0.76
IRF1-211ENST00000613424 SNRPEP62304 92 aaKnown RBP10.33□□□□□ -0.76
IRF1-211ENST00000613424 HERV-K104P63124 156 aa10.33□□□□□ -0.76
IRF1-211ENST00000613424 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
IRF1-211ENST00000613424 E9PLD3 99 aa10.32□□□□□ -0.76
IRF1-211ENST00000613424 M0QXV9 152 aa10.32□□□□□ -0.76
IRF1-211ENST00000613424 LINC00158P58513 81 aa10.32□□□□□ -0.76
IRF1-211ENST00000613424 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
IRF1-211ENST00000613424 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
IRF1-211ENST00000613424 C20orf202A1L168 122 aa10.31□□□□□ -0.76
IRF1-211ENST00000613424 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
IRF1-211ENST00000613424 PLA2G2DQ9UNK4 145 aa10.31□□□□□ -0.76
IRF1-211ENST00000613424 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
IRF1-211ENST00000613424 C5orf52A6NGY3 159 aa10.3□□□□□ -0.76
IRF1-211ENST00000613424 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
IRF1-211ENST00000613424 NMUP48645 174 aa10.3□□□□□ -0.76
IRF1-211ENST00000613424 PRR3P79522 188 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms