RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 TMEM170BQ5T4T1 132 aa13.42□□□□□ -0.26
GRAMD1A-214ENST00000603907 SYS1-DBNDD2H3BUS1 97 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 SPINK8P0C7L1 97 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 CXCL5P42830 114 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 LINC01620Q4KN68 170 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 C6orf226Q5I0X4 101 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 SDIM1Q6ZPB5 146 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 Q6ZRU5 148 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 TOMM7Q9P0U1 55 aa13.41□□□□□ -0.26
GRAMD1A-214ENST00000603907 IGLV5-39A0A0G2JS06 123 aa13.4□□□□□ -0.26
GRAMD1A-214ENST00000603907 PET117Q6UWS5 81 aa13.4□□□□□ -0.26
GRAMD1A-214ENST00000603907 FAM229AH3BQW9 127 aa13.39□□□□□ -0.27
GRAMD1A-214ENST00000603907 CKS1BP61024 79 aa13.39□□□□□ -0.27
GRAMD1A-214ENST00000603907 Q6ZSA8 131 aa13.39□□□□□ -0.27
GRAMD1A-214ENST00000603907 HIST3H2BBQ8N257 126 aa13.39□□□□□ -0.27
GRAMD1A-214ENST00000603907 COX7B2Q8TF08 81 aa13.39□□□□□ -0.27
GRAMD1A-214ENST00000603907 FLG2Q5D862 2391 aaPredicted RBP13.38□□□□□ -0.27
GRAMD1A-214ENST00000603907 TRBV30A0A0K0K1B3 111 aa13.38□□□□□ -0.27
GRAMD1A-214ENST00000603907 DPM2O94777 84 aa13.38□□□□□ -0.27
GRAMD1A-214ENST00000603907 S100A2P29034 98 aa13.38□□□□□ -0.27
GRAMD1A-214ENST00000603907 SMR3BP02814 79 aaPredicted RBP13.37□□□□□ -0.27
GRAMD1A-214ENST00000603907 TMEM223A0PJW6 202 aa13.36□□□□□ -0.27
GRAMD1A-214ENST00000603907 IGKCP01834 107 aa13.36□□□□□ -0.27
GRAMD1A-214ENST00000603907 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
GRAMD1A-214ENST00000603907 UNQ6190/PRO20217Q6UXQ8 127 aa13.36□□□□□ -0.27
GRAMD1A-214ENST00000603907 DNAH8Q96JB1 4490 aa13.35□□□□□ -0.27
GRAMD1A-214ENST00000603907 J3QL48 77 aa13.35□□□□□ -0.27
GRAMD1A-214ENST00000603907 LINC01545Q5VT33 79 aa13.35□□□□□ -0.27
GRAMD1A-214ENST00000603907 SRRM2Q9UQ35 2752 aaKnown RBP13.35□□□□□ -0.27
GRAMD1A-214ENST00000603907 FAT1Q14517 4588 aa13.35□□□□□ -0.27
GRAMD1A-214ENST00000603907 LOC107984640A0A0U1RRK4 108 aa13.34□□□□□ -0.27
GRAMD1A-214ENST00000603907 C10orf25Q5T742 122 aa13.34□□□□□ -0.27
GRAMD1A-214ENST00000603907 C2orf82Q6UX34 121 aa13.34□□□□□ -0.27
GRAMD1A-214ENST00000603907 C6orf48Q9UBA6 75 aa13.34□□□□□ -0.27
GRAMD1A-214ENST00000603907 TLX1NBP0CAT3 122 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 KRTDAPP60985 99 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 SFTA2Q6UW10 78 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 HIST1H2BLQ99880 126 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 FAM30AQ9NZY2 134 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 LINC00474Q9P2X8 69 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 MYCBP2O75592 4640 aa13.33□□□□□ -0.28
GRAMD1A-214ENST00000603907 C20orf202A1L168 122 aa13.32□□□□□ -0.28
GRAMD1A-214ENST00000603907 C5orf52A6NGY3 159 aa13.32□□□□□ -0.28
GRAMD1A-214ENST00000603907 SNRPEP62304 92 aaKnown RBP13.32□□□□□ -0.28
GRAMD1A-214ENST00000603907 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
GRAMD1A-214ENST00000603907 PMCHL2Q9BQD1 86 aa13.32□□□□□ -0.28
GRAMD1A-214ENST00000603907 VPS13BQ7Z7G8 4022 aa13.31□□□□□ -0.28
GRAMD1A-214ENST00000603907 AKR1D1P51857 326 aa13.31□□□□□ -0.28
GRAMD1A-214ENST00000603907 HERVK_113P61574 105 aa13.31□□□□□ -0.28
GRAMD1A-214ENST00000603907 SPACA4Q8TDM5 124 aa13.28□□□□□ -0.28
GRAMD1A-214ENST00000603907 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.28□□□□□ -0.28
GRAMD1A-214ENST00000603907 A0A096LNI7 61 aa13.27□□□□□ -0.29
GRAMD1A-214ENST00000603907 NDUFC2-KCTD14E9PQ53 114 aa13.27□□□□□ -0.29
GRAMD1A-214ENST00000603907 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
GRAMD1A-214ENST00000603907 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
GRAMD1A-214ENST00000603907 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
GRAMD1A-214ENST00000603907 IGKV2-24A0A0C4DH68 120 aa13.25□□□□□ -0.29
GRAMD1A-214ENST00000603907 LEPROTO15243 131 aa13.25□□□□□ -0.29
GRAMD1A-214ENST00000603907 HAMPP81172 84 aa13.25□□□□□ -0.29
GRAMD1A-214ENST00000603907 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
GRAMD1A-214ENST00000603907 SCXQ7RTU7 201 aa13.25□□□□□ -0.29
GRAMD1A-214ENST00000603907 PANO1I0J062 215 aa13.24□□□□□ -0.29
GRAMD1A-214ENST00000603907 CHTF8P0CG12 524 aa13.24□□□□□ -0.29
GRAMD1A-214ENST00000603907 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
GRAMD1A-214ENST00000603907 DPH3Q96FX2 82 aa13.24□□□□□ -0.29
GRAMD1A-214ENST00000603907 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
GRAMD1A-214ENST00000603907 MAJINQ3KP22 176 aa13.23□□□□□ -0.29
GRAMD1A-214ENST00000603907 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
GRAMD1A-214ENST00000603907 Q6ZRP5 223 aa13.23□□□□□ -0.29
GRAMD1A-214ENST00000603907 E9PLD3 99 aa13.22□□□□□ -0.29
GRAMD1A-214ENST00000603907 HERV-K104P63124 156 aa13.21□□□□□ -0.29
GRAMD1A-214ENST00000603907 COX17Q14061 63 aa13.21□□□□□ -0.29
GRAMD1A-214ENST00000603907 PLAC8Q9NZF1 115 aa13.21□□□□□ -0.29
GRAMD1A-214ENST00000603907 A0A087WYN8 130 aa13.2□□□□□ -0.3
GRAMD1A-214ENST00000603907 J3QQQ9 107 aa13.2□□□□□ -0.3
GRAMD1A-214ENST00000603907 NMUP48645 174 aa13.2□□□□□ -0.3
GRAMD1A-214ENST00000603907 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
GRAMD1A-214ENST00000603907 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
GRAMD1A-214ENST00000603907 STPG4Q8N801 248 aa13.19□□□□□ -0.3
GRAMD1A-214ENST00000603907 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
GRAMD1A-214ENST00000603907 PLA2G1BP04054 148 aaKnown RBP13.18□□□□□ -0.3
GRAMD1A-214ENST00000603907 LGALS3P17931 250 aaKnown RBP13.18□□□□□ -0.3
GRAMD1A-214ENST00000603907 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
GRAMD1A-214ENST00000603907 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
GRAMD1A-214ENST00000603907 ERG28Q9UKR5 140 aa13.18□□□□□ -0.3
GRAMD1A-214ENST00000603907 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1A-214ENST00000603907 TSPEAR-AS2P59090 65 aa13.16□□□□□ -0.3
GRAMD1A-214ENST00000603907 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
GRAMD1A-214ENST00000603907 TMA7Q9Y2S6 64 aaKnown RBP13.14□□□□□ -0.31
GRAMD1A-214ENST00000603907 PFN2P35080 140 aa13.13□□□□□ -0.31
GRAMD1A-214ENST00000603907 C9orf129Q5T035 196 aaKnown RBP13.12□□□□□ -0.31
GRAMD1A-214ENST00000603907 A0A1W2PNN7 141 aa13.11□□□□□ -0.31
GRAMD1A-214ENST00000603907 MEIG1Q5JSS6 88 aa13.11□□□□□ -0.31
GRAMD1A-214ENST00000603907 ATOH7Q8N100 152 aa13.11□□□□□ -0.31
GRAMD1A-214ENST00000603907 SCGB1D1O95968 90 aa13.1□□□□□ -0.31
GRAMD1A-214ENST00000603907 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
GRAMD1A-214ENST00000603907 HSBP1L1C9JCN9 74 aa13.09□□□□□ -0.31
GRAMD1A-214ENST00000603907 LINC00158P58513 81 aa13.09□□□□□ -0.31
GRAMD1A-214ENST00000603907 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
GRAMD1A-214ENST00000603907 PLA2G2DQ9UNK4 145 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms