RNA–Protein interactions for RNA: ENST00000600227.5

FKRP-218, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-218ENST00000600227 C2orf82Q6UX34 121 aa12.14□□□□□ -0.47
FKRP-218ENST00000600227 TOMM7Q9P0U1 55 aa12.14□□□□□ -0.47
FKRP-218ENST00000600227 IFI27L1Q96BM0 104 aa12.13□□□□□ -0.47
FKRP-218ENST00000600227 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
FKRP-218ENST00000600227 TRAV12-1A0A0B4J245 112 aa12.12□□□□□ -0.47
FKRP-218ENST00000600227 H3BRM9 83 aa12.12□□□□□ -0.47
FKRP-218ENST00000600227 PLA2G1BP04054 148 aaKnown RBP12.12□□□□□ -0.47
FKRP-218ENST00000600227 ZNF22P17026 224 aaPredicted RBP12.12□□□□□ -0.47
FKRP-218ENST00000600227 STPG4Q8N801 248 aa12.12□□□□□ -0.47
FKRP-218ENST00000600227 NUPR1O60356 82 aa12.11□□□□□ -0.47
FKRP-218ENST00000600227 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
FKRP-218ENST00000600227 KRTAP10-4P60372 401 aaPredicted RBP12.11□□□□□ -0.47
FKRP-218ENST00000600227 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
FKRP-218ENST00000600227 GAGE2BQ13066 116 aa12.11□□□□□ -0.47
FKRP-218ENST00000600227 C6orf226Q5I0X4 101 aa12.11□□□□□ -0.47
FKRP-218ENST00000600227 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BKO60814 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BJP06899 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 S100A1P23297 94 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BOP23527 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BBP33778 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BDP58876 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 CKS1BP61024 79 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BCP62807 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST2H2BEQ16778 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BHQ93079 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BNQ99877 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 HIST1H2BMQ99879 126 aa12.1□□□□□ -0.47
FKRP-218ENST00000600227 CXCL5P42830 114 aa12.09□□□□□ -0.47
FKRP-218ENST00000600227 Q6ZRP5 223 aa12.09□□□□□ -0.47
FKRP-218ENST00000600227 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
FKRP-218ENST00000600227 CHTOPQ9Y3Y2 248 aaKnown RBP12.09□□□□□ -0.47
FKRP-218ENST00000600227 IGLV5-39A0A0G2JS06 123 aa12.08□□□□□ -0.48
FKRP-218ENST00000600227 F8VRH5 84 aa12.08□□□□□ -0.48
FKRP-218ENST00000600227 ATP6V1G1O75348 118 aa12.08□□□□□ -0.48
FKRP-218ENST00000600227 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
FKRP-218ENST00000600227 INAFM2P0DMQ5 153 aa12.07□□□□□ -0.48
FKRP-218ENST00000600227 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
FKRP-218ENST00000600227 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
FKRP-218ENST00000600227 C9orf116Q5BN46 136 aaPredicted RBP12.05□□□□□ -0.48
FKRP-218ENST00000600227 A0A1W2PNN7 141 aa12.04□□□□□ -0.48
FKRP-218ENST00000600227 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
FKRP-218ENST00000600227 HSPB8Q9UJY1 196 aa12.04□□□□□ -0.48
FKRP-218ENST00000600227 PKHD1L1Q86WI1 4243 aa12.04□□□□□ -0.48
FKRP-218ENST00000600227 ODF1Q14990 250 aa12.03□□□□□ -0.48
FKRP-218ENST00000600227 C7orf33Q8WU49 177 aa12.02□□□□□ -0.49
FKRP-218ENST00000600227 FABP4P15090 132 aa12.01□□□□□ -0.49
FKRP-218ENST00000600227 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
FKRP-218ENST00000600227 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
FKRP-218ENST00000600227 MYCBP2O75592 4640 aa12.01□□□□□ -0.49
FKRP-218ENST00000600227 TMEM223A0PJW6 202 aa12□□□□□ -0.49
FKRP-218ENST00000600227 COA6Q5JTJ3 125 aaKnown RBP12□□□□□ -0.49
FKRP-218ENST00000600227 H0Y8G0 127 aa11.99□□□□□ -0.49
FKRP-218ENST00000600227 C9orf129Q5T035 196 aaKnown RBP11.99□□□□□ -0.49
FKRP-218ENST00000600227 FLG2Q5D862 2391 aaPredicted RBP11.98□□□□□ -0.49
FKRP-218ENST00000600227 FAM168BA1KXE4 195 aa11.97□□□□□ -0.49
FKRP-218ENST00000600227 KRTAP7-1Q8IUC3 87 aa11.96□□□□□ -0.49
FKRP-218ENST00000600227 MAP1LC3CQ9BXW4 147 aa11.96□□□□□ -0.49
FKRP-218ENST00000600227 PLNP26678 52 aa11.95□□□□□ -0.5
FKRP-218ENST00000600227 SFTA2Q6UW10 78 aa11.95□□□□□ -0.5
FKRP-218ENST00000600227 HNRNPA3P51991 378 aaKnown RBP11.94□□□□□ -0.5
FKRP-218ENST00000600227 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
FKRP-218ENST00000600227 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
FKRP-218ENST00000600227 ZNF625Q96I27 306 aaPredicted RBP11.94□□□□□ -0.5
FKRP-218ENST00000600227 PHF5AQ7RTV0 110 aaKnown RBP11.93□□□□□ -0.5
FKRP-218ENST00000600227 XAGE1AQ9HD64 81 aa11.93□□□□□ -0.5
FKRP-218ENST00000600227 DPM2O94777 84 aa11.92□□□□□ -0.5
FKRP-218ENST00000600227 SYS1-DBNDD2H3BUS1 97 aa11.91□□□□□ -0.5
FKRP-218ENST00000600227 PMCHL2Q9BQD1 86 aa11.91□□□□□ -0.5
FKRP-218ENST00000600227 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
FKRP-218ENST00000600227 M0QXV9 152 aa11.9□□□□□ -0.5
FKRP-218ENST00000600227 IGKCP01834 107 aa11.9□□□□□ -0.5
FKRP-218ENST00000600227 SERTAD4-AS1Q5TG53 156 aa11.9□□□□□ -0.5
FKRP-218ENST00000600227 COX17Q14061 63 aa11.89□□□□□ -0.51
FKRP-218ENST00000600227 FAT3Q8TDW7 4589 aa11.88□□□□□ -0.51
FKRP-218ENST00000600227 PFN2P35080 140 aa11.87□□□□□ -0.51
FKRP-218ENST00000600227 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
FKRP-218ENST00000600227 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
FKRP-218ENST00000600227 LINC01545Q5VT33 79 aa11.86□□□□□ -0.51
FKRP-218ENST00000600227 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
FKRP-218ENST00000600227 PSORS1C2Q9UIG4 136 aa11.86□□□□□ -0.51
FKRP-218ENST00000600227 LEPROTO15243 131 aa11.85□□□□□ -0.51
FKRP-218ENST00000600227 TSPEAR-AS2P59090 65 aa11.85□□□□□ -0.51
FKRP-218ENST00000600227 HERVK_113P61574 105 aa11.85□□□□□ -0.51
FKRP-218ENST00000600227 KRTAP11-1Q8IUC1 163 aa11.85□□□□□ -0.51
FKRP-218ENST00000600227 C3orf79P0CE67 100 aa11.84□□□□□ -0.51
FKRP-218ENST00000600227 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
FKRP-218ENST00000600227 TP73-AS1Q9UF72 201 aa11.84□□□□□ -0.51
FKRP-218ENST00000600227 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
FKRP-218ENST00000600227 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
FKRP-218ENST00000600227 IGLV5-37A0A075B6J1 123 aa11.83□□□□□ -0.52
FKRP-218ENST00000600227 HERV-K104P63124 156 aa11.83□□□□□ -0.52
FKRP-218ENST00000600227 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
FKRP-218ENST00000600227 KRTAP29-1A8MX34 341 aaPredicted RBP11.82□□□□□ -0.52
FKRP-218ENST00000600227 DMBT1Q9UGM3 2413 aaPredicted RBP11.82□□□□□ -0.52
FKRP-218ENST00000600227 J3QQQ9 107 aa11.81□□□□□ -0.52
FKRP-218ENST00000600227 LBHQ53QV2 105 aaPredicted RBP11.81□□□□□ -0.52
FKRP-218ENST00000600227 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
FKRP-218ENST00000600227 E9PLD3 99 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms