RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 KRTAP4-5Q9BYR2 181 aa8.74□□□□□ -1.01
VRK3-219ENST00000600137 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
VRK3-219ENST00000600137 A0A096LNI7 61 aa8.73□□□□□ -1.01
VRK3-219ENST00000600137 F8VRH5 84 aa8.73□□□□□ -1.01
VRK3-219ENST00000600137 NDUFA1O15239 70 aa8.73□□□□□ -1.01
VRK3-219ENST00000600137 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
VRK3-219ENST00000600137 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
VRK3-219ENST00000600137 Q8N1X5 172 aa8.72□□□□□ -1.01
VRK3-219ENST00000600137 PACRGQ96M98 296 aaPredicted RBP8.72□□□□□ -1.01
VRK3-219ENST00000600137 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
VRK3-219ENST00000600137 HSPB8Q9UJY1 196 aa8.72□□□□□ -1.01
VRK3-219ENST00000600137 SMR3BP02814 79 aaPredicted RBP8.71□□□□□ -1.02
VRK3-219ENST00000600137 TLX1NBP0CAT3 122 aa8.71□□□□□ -1.02
VRK3-219ENST00000600137 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
VRK3-219ENST00000600137 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.02
VRK3-219ENST00000600137 EPM2AB3EWF7 344 aa8.7□□□□□ -1.02
VRK3-219ENST00000600137 H3BRM9 83 aa8.7□□□□□ -1.02
VRK3-219ENST00000600137 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
VRK3-219ENST00000600137 COX7B2Q8TF08 81 aa8.7□□□□□ -1.02
VRK3-219ENST00000600137 A0A087WYN8 130 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 TMEM223A0PJW6 202 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 PRSS2P07478 247 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 Q6ZRP5 223 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
VRK3-219ENST00000600137 IGKV2-24A0A0C4DH68 120 aa8.68□□□□□ -1.02
VRK3-219ENST00000600137 H0Y8G0 127 aa8.68□□□□□ -1.02
VRK3-219ENST00000600137 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
VRK3-219ENST00000600137 CKS1BP61024 79 aa8.67□□□□□ -1.02
VRK3-219ENST00000600137 MAJINQ3KP22 176 aa8.67□□□□□ -1.02
VRK3-219ENST00000600137 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
VRK3-219ENST00000600137 MAP1LC3CQ9BXW4 147 aa8.67□□□□□ -1.02
VRK3-219ENST00000600137 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
VRK3-219ENST00000600137 C3orf79P0CE67 100 aa8.66□□□□□ -1.02
VRK3-219ENST00000600137 CXCL5P42830 114 aa8.66□□□□□ -1.02
VRK3-219ENST00000600137 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
VRK3-219ENST00000600137 KRTAP10-4P60372 401 aaPredicted RBP8.65□□□□□ -1.02
VRK3-219ENST00000600137 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
VRK3-219ENST00000600137 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
VRK3-219ENST00000600137 HIST3H2BBQ8N257 126 aa8.65□□□□□ -1.02
VRK3-219ENST00000600137 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
VRK3-219ENST00000600137 DPM2O94777 84 aa8.64□□□□□ -1.03
VRK3-219ENST00000600137 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
VRK3-219ENST00000600137 STPG4Q8N801 248 aa8.64□□□□□ -1.03
VRK3-219ENST00000600137 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
VRK3-219ENST00000600137 LINC00474Q9P2X8 69 aa8.64□□□□□ -1.03
VRK3-219ENST00000600137 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
VRK3-219ENST00000600137 IGKCP01834 107 aa8.63□□□□□ -1.03
VRK3-219ENST00000600137 PLNP26678 52 aa8.63□□□□□ -1.03
VRK3-219ENST00000600137 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
VRK3-219ENST00000600137 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
VRK3-219ENST00000600137 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
VRK3-219ENST00000600137 Q5VSD8 79 aa8.62□□□□□ -1.03
VRK3-219ENST00000600137 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
VRK3-219ENST00000600137 TSPEAR-AS2P59090 65 aa8.61□□□□□ -1.03
VRK3-219ENST00000600137 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
VRK3-219ENST00000600137 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
VRK3-219ENST00000600137 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
VRK3-219ENST00000600137 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
VRK3-219ENST00000600137 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
VRK3-219ENST00000600137 PCLOQ9Y6V0 5065 aa8.6□□□□□ -1.03
VRK3-219ENST00000600137 SNRPEP62304 92 aaKnown RBP8.59□□□□□ -1.03
VRK3-219ENST00000600137 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
VRK3-219ENST00000600137 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
VRK3-219ENST00000600137 LEPROTO15243 131 aa8.58□□□□□ -1.04
VRK3-219ENST00000600137 KRTDAPP60985 99 aa8.58□□□□□ -1.04
VRK3-219ENST00000600137 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
VRK3-219ENST00000600137 ERG28Q9UKR5 140 aa8.57□□□□□ -1.04
VRK3-219ENST00000600137 S100A6P06703 90 aa8.56□□□□□ -1.04
VRK3-219ENST00000600137 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
VRK3-219ENST00000600137 E9PLD3 99 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 J3QQQ9 107 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 PFN2P35080 140 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 COX17Q14061 63 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 SERTAD4-AS1Q5TG53 156 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
VRK3-219ENST00000600137 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
VRK3-219ENST00000600137 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
VRK3-219ENST00000600137 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
VRK3-219ENST00000600137 IGKV2D-26A0A0A0MRZ7 120 aa8.53□□□□□ -1.04
VRK3-219ENST00000600137 S100A2P29034 98 aa8.53□□□□□ -1.04
VRK3-219ENST00000600137 HERVK_113P61574 105 aa8.53□□□□□ -1.04
VRK3-219ENST00000600137 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
VRK3-219ENST00000600137 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
VRK3-219ENST00000600137 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
VRK3-219ENST00000600137 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
VRK3-219ENST00000600137 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
VRK3-219ENST00000600137 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
VRK3-219ENST00000600137 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
VRK3-219ENST00000600137 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
VRK3-219ENST00000600137 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
VRK3-219ENST00000600137 HERV-K104P63124 156 aa8.52□□□□□ -1.05
VRK3-219ENST00000600137 Q8NDZ9 215 aa8.52□□□□□ -1.05
VRK3-219ENST00000600137 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
VRK3-219ENST00000600137 C22orf24Q9Y442 160 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms